BAC Information

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BAC

Clone NameB6Ng01-023J07
Chromosome3 (Build37)
Map Location 117,078,220 - 117,079,292
singlet/doubletsinglet
Overlap genenone
Upstream geneCdc14a, Rtcd1, Dbt, LOC100043702, LOC100043705, Lrrc39, A930028L21Rik, Sass6, Hiat1, Slc35a3, Agl, LOC100043710, LOC100043250, Frrs1, Palmd, EG668749, 1700061I17Rik, LOC674908, D3Bwg0562e
Downstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023J07.bB6Ng01-023J07.g
ACCDH855462DH855463
length1,068163
definitionDH855462|Mus musculus domesticus DNA, BAC clone: B6Ng01-023J07, 5' end.DH855463|Mus musculus domesticus DNA, BAC clone: B6Ng01-023J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gcaccccatatgggtgatcatactgtctctagaataaatcctcacctttt
cctcatattcagtttctaagaaatctgtcgtgactgaattgttctacaac
atttaattacaccatggtatctagatcttggcccttcttgtcacattata
tagccacgaattcatagcccagtgaatccctgacactacttcagacatat
ggaaatagcatggacacaaaatacagtctaagttatttttatcaaagttg
atagaaataaaagttattttctaatacgctgtaaagtgaggggaatgata
tgtttaatgtgacatttaaatttcaggcaactatttgcctttgcaaatat
tattcagagagactctttaatccttaaaatgtcataaaatggcaaaagcc
acgttatacaaatatttttaatttgtgcaatctgtgctgagttctttgaa
agttaagtaaaactggcatattaatcagagtaaattaagtaatacttcag
ggaaagcagatggcaccttggtcttaatgtcattcgaacactgaaaccaa
ctgctatattgatcagagagaaggggatttgatttggtgaaaataaaaat
gtttttgctcttggcccttattatgtaactttcaaattagaatttttgat
atgtatgcacatatattcaaacataaatatacagccatacataagaaaga
ggtacctacattccagtgtttataaatctgtgtatgtttagtgaaattta
ggaaaaagtgttttaaagaagtttgaaacattaaaattttaaagatttat
ttatcttattttgtgtatatgacttttttttgcatatgtgtatgtgcacc
atgtgtgtgcctaatatacatgcggtcagtagtgggcactgtatccctgg
acctaaagttatagatggtatgagcctccagtgagtgctggcttataatc
agtagaagaaagcacaatcagatgtacaagagctcatgtattcttgacac
tcactggttgaggcagactgatagggtagttagtttcaggcatctggtta
tattaggaagaacctatg
cggaattaagaaaatacattggttttcctcggtttctccctgctatagag
gagagcagaggagaggagtggaatgaaatggaggataggggagaggaaga
aaagaagagagagaagagtggagaggatcttaaagagaggagaggagagg
agaggagaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117078220_117079292
seq2: B6Ng01-023J07.b_54_1121

seq1  GCACCCCATATGGGTGATCATACTGTCTCTAGAATAAATCCTCACCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCCATATGGGTGATCATACTGTCTCTAGAATAAATCCTCACCTTTT  50

seq1  CCTCATATTCAGTTTCTAAGAAATCTGTCGTGACTGAATTGTTCTACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATATTCAGTTTCTAAGAAATCTGTCGTGACTGAATTGTTCTACAAC  100

seq1  ATTTAATTACACCATGGTATCTAGATCTTGGCCCTTCTTGTCACATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTACACCATGGTATCTAGATCTTGGCCCTTCTTGTCACATTATA  150

seq1  TAGCCACGAATTCATAGCCCAGTGAATCCCTGACACTACTTCAGACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACGAATTCATAGCCCAGTGAATCCCTGACACTACTTCAGACATAT  200

seq1  GGAAATAGCATGGACACAAAATACAGTCTAAGTTATTTTTATCAAAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGCATGGACACAAAATACAGTCTAAGTTATTTTTATCAAAGTTG  250

seq1  ATAGAAATAAAAGTTATTTTCTAATACGCTGTAAAGTGAGGGGAATGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATAAAAGTTATTTTCTAATACGCTGTAAAGTGAGGGGAATGATA  300

seq1  TGTTTAATGTGACATTTAAATTTCAGGCAACTATTTGCCTTTGCAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATGTGACATTTAAATTTCAGGCAACTATTTGCCTTTGCAAATAT  350

seq1  TATTCAGAGAGACTCTTTAATCCTTAAAATGTCATAAAATGGCAAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAGAGACTCTTTAATCCTTAAAATGTCATAAAATGGCAAAAGCC  400

seq1  ACGTTATACAAATATTTTTAATTTGTGCAATCTGTGCTGAGTTCTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTATACAAATATTTTTAATTTGTGCAATCTGTGCTGAGTTCTTTGAA  450

seq1  AGTTAAGTAAAACTGGCATATTAATCAGAGTAAATTAAGTAATACTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTAAAACTGGCATATTAATCAGAGTAAATTAAGTAATACTTCAG  500

seq1  GGAAAGCAGATGGCACCTTGGTCTTAATGTCATTCGAACACTGAAACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAGATGGCACCTTGGTCTTAATGTCATTCGAACACTGAAACCAA  550

seq1  CTGCTATATTGATCAGAGAGAAGGGGATTTGATTTGGTGAAAATAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATATTGATCAGAGAGAAGGGGATTTGATTTGGTGAAAATAAAAAT  600

seq1  GTTTTTGCTCTTGGCCCTTATTATGTAACTTTCAAATTAGAATTTTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGCTCTTGGCCCTTATTATGTAACTTTCAAATTAGAATTTTTGAT  650

seq1  ATGTATGCACATATATTCAAACATAAATATACAGCCATACATAAGAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCACATATATTCAAACATAAATATACAGCCATACATAAGAAAGA  700

seq1  GGTACCTACATTCCAGTGTTTATAAATCTGTGTATGTTTAGTGAAATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTACATTCCAGTGTTTATAAATCTGTGTATGTTTAGTGAAATTTA  750

seq1  GGAAAAAGTGTTTTAAAGAAGTTTGAAACATTAAAATTTTAAAGATTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGTGTTTTAAAGAAGTTTGAAACATTAAAATTTTAAAGATTTAT  800

seq1  TTATCTTATTTTGTGTATATGACTTTTTTTTGCATATGTGTATGTGCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTATTTTGTGTATATGACTTTTTTTTGCATATGTGTATGTGCACC  850

seq1  ATGTGTGTGCCTAATATACAGGCGGTCAGTAGTGGGCACTGTATCCCTGG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATGTGTGTGCCTAATATACATGCGGTCAGTAGTGGGCACTGTATCCCTGG  900

seq1  ACCTAAAGTTATAGATGGTTATGAGCCTCCAGGTGAGTGCTGGCTTTATA  950
      |||||||||||||||||| |||||||||||| |||||||||||| |||||
seq2  ACCTAAAGTTATAGATGG-TATGAGCCTCCA-GTGAGTGCTGGC-TTATA  947

seq1  ATCAGTAGAAGAAAGCACCATTCAGGATGGTACAAGAGCTCATGTATTCC  1000
      ||||||||||||||||| || ||| ||| |||||||||||||||||||| 
seq2  ATCAGTAGAAGAAAGCA-CAATCA-GAT-GTACAAGAGCTCATGTATTCT  994

seq1  TGACACTCACT-GCTGAGGCAGACTGATAGGG-AGTTAGTTCAGGGCAAT  1048
      ||||||||||| | |||||||||||||||||| ||||||||   ||| ||
seq2  TGACACTCACTGGTTGAGGCAGACTGATAGGGTAGTTAGTTTCAGGC-AT  1043

seq1  CTGGTTTAATTAGGAAGAACCTATG  1073
      ||||||  |||||||||||||||||
seq2  CTGGTTATATTAGGAAGAACCTATG  1068