BAC Information

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BAC

Clone NameB6Ng01-024L11
Chromosome3 (Build37)
Map Location 150,102,420 - 150,222,685
singlet/doubletdoublet
Overlap geneLOC100040455, LOC100040463, LOC623554
Upstream geneLOC100040620, LOC100040633
Downstream geneEltd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024L11.bB6Ng01-024L11.g
ACCDH856266DH856267
length1,1261,087
definitionDH856266|Mus musculus domesticus DNA, BAC clone: B6Ng01-024L11, 5' end.DH856267|Mus musculus domesticus DNA, BAC clone: B6Ng01-024L11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,102,420 - 150,103,542)(150,221,599 - 150,222,685)
sequence
gaattctttacaaaccctctctgtgcatcatttgttattcgcactcatat
cctgagatgcatttctctgctctgagattttgctctccttttggtcagat
gttacagagattcattcactttttgatctagaaagaacttaaatatcttg
tcccttttaaatattcctgtaagaagcatttccattgctgtttcatctct
gtaatatatcagctctgaagaaaagaaggcacaataaccatatcacctaa
tctttacatcactctccaaagagtacttgctagatagtataactcccttt
ttggggtacagtgtttgagtagatggtgatgggtctaggtacatcaatat
atctcattcctcttcttcatagggtggtaggtgaaagaaaactcactcac
gccaaataagtcagaaaagaaagaaaatagtgatgggccctttctgaaaa
tgtaaatatcagcaataccatcaacaaaattaatgggaagatcaagttcc
acatgtcattacaaacattgtcattacaaatatgcttcatagttgacaat
tcaaaatacaataaatagacgcaattacacaatcagaggaataaatggac
aaagagtggggagatagtttctctgggtattgataattgtaaacttggtt
gcatttagagtcaccagggaacgatgaccctagaatgtgacagctcatgc
ttaagggaaaattaaaactaaggccagaagattcagcttaagcatatgtg
gtgccattgcatagtttggagatcttgacctaaacacaaagggaaaaatg
tctgaacatcaacttttgtcttttaatccgggactgtagattcacgttag
cagccaccaacactcttggcactgtgtcttttgtaaaatcgcaaacatat
cctgtccctcctgaggcatgatatatcctttatgtcctttaatacgtttg
ccatatattttggcacaagaatggagtgaagtgacaaaaagtcaatactt
tttataagaaagaaacattaataacattcaaatactcaggaagaatagac
aaataatacagcatttcttagggttaaaaacagatccggtggcgtggcaa
gaaaaatgccagttttgtattcttaa
gaattcatccgatctttattggatttataattagtcatatatgattttta
aaaatgtattcctgaaattataaagccaacaagctattctttcttcttaa
tctaaattatattaaatgtggagctgttttgttttaattgaaaaagaatt
ctaagagagtaagtccactaagaagtataggctatgatacacatggactt
tttaaattaagcacaatcacaagcaatcacaacaataaaacagacaaata
gcagatatgtcatagttttacttcagtctacaaatttgtaattttaggaa
ccaaatgcattttttttttcgagacagggtttctctgtatagccctggct
gtcctggaactcactttggagaccagactagcctccaactcagaaatacg
cctgcctctgcctcctgagtgctgggattaaaggcgtgcaccaccacgcc
tggcttacatttgtttttttacactgctcaaaactgctaaataattcatt
tgataccaaaatatgtatttaattttaaattttctacaaggtcacgacca
acatgaacccccctgggaagagcttaaagcttttgttctggaggagccag
ctatttacagtgtgaagtcatttactagatttgttacattgggtcatcaa
tttaatatttataaacaaaaccagtgataaaatgtgttcatgtatttcaa
cttaagcaacataaattgaatatccagagcatggcaaactcctttcttaa
ggatgagtgctgctaagatgcacactactatgagcaattgaataaactaa
ataagttagtgcaaatgaacaattccaaaacaaagtgtatactggatgcg
accattgtccccacttttataatgagtaatgttttgtgtctctttccttg
agtccacttttctactggacatagtgacaatagccattataccagccact
tgaggctgaggcatgattaacatacgtgcctaggctacagacacttccac
tgttagacctgacattttatggaggccacattctgaaaataaaatacagt
aatgacaaaaatggtctttttcaatctatcagtatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150102420_150103542
seq2: B6Ng01-024L11.b_42_1167

seq1  GAATTCTTTACAAACCCTCTCTGTGCATCATTTGTTATTCGCACTCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACAAACCCTCTCTGTGCATCATTTGTTATTCGCACTCATAT  50

seq1  CCTGAGATGCATTTCTCTGCTCTGAGATTTTGCTCTCCTTTTGGTCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATGCATTTCTCTGCTCTGAGATTTTGCTCTCCTTTTGGTCAGAT  100

seq1  GTTACAGAGATTCATTCACTTTTTGATCTAGAAAGAACTTAAATATCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGAGATTCATTCACTTTTTGATCTAGAAAGAACTTAAATATCTTG  150

seq1  TCCCTTTTAAATATTCCTGTAAGAAGCATTTCCATTGCTGTTTCATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTAAATATTCCTGTAAGAAGCATTTCCATTGCTGTTTCATCTCT  200

seq1  GTAATATATCAGCTCTGAAGAAAAGAAGGCACAATAACCATATCACCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATATCAGCTCTGAAGAAAAGAAGGCACAATAACCATATCACCTAA  250

seq1  TCTTTACATCACTCTCCAAAGAGTACTTGCTAGATAGTATAACTCCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACATCACTCTCCAAAGAGTACTTGCTAGATAGTATAACTCCCTTT  300

seq1  TTGGGGTACAGTGTTTGAGTAGATGGTGATGGGTCTAGGTACATCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTACAGTGTTTGAGTAGATGGTGATGGGTCTAGGTACATCAATAT  350

seq1  ATCTCATTCCTCTTCTTCATAGGGTGGTAGGTGAAAGAAAACTCACTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTCCTCTTCTTCATAGGGTGGTAGGTGAAAGAAAACTCACTCAC  400

seq1  GCCAAATAAGTCAGAAAAGAAAGAAAATAGTGATGGGCCCTTTCTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATAAGTCAGAAAAGAAAGAAAATAGTGATGGGCCCTTTCTGAAAA  450

seq1  TGTAAATATCAGCAATACCATCAACAAAATTAATGGGAAGATCAAGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATATCAGCAATACCATCAACAAAATTAATGGGAAGATCAAGTTCC  500

seq1  ACATGTCATTACAAACATTGTCATTACAAATATGCTTCATAGTTGACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCATTACAAACATTGTCATTACAAATATGCTTCATAGTTGACAAT  550

seq1  TCAAAATACAATAAATAGACGCAATTACACAATCAGAGGAATAAATGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATACAATAAATAGACGCAATTACACAATCAGAGGAATAAATGGAC  600

seq1  AAAGAGTGGGGAGATAGTTTCTCTGGGTATTGATAATTGTAAACTTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGGGGAGATAGTTTCTCTGGGTATTGATAATTGTAAACTTGGTT  650

seq1  GCATTTAGAGTCACCAGGGAACGATGACCCTAGAATGTGACAGCTCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAGAGTCACCAGGGAACGATGACCCTAGAATGTGACAGCTCATGC  700

seq1  TTAAGGGAAAATT-AAACTAAGGCCAGAAGATTCAGCTTAAGCATATGTG  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGAAAATTAAAACTAAGGCCAGAAGATTCAGCTTAAGCATATGTG  750

seq1  GTGCCATTGCATAG-TTGGAGATCTTGACCTAAACACAAAGGGAAAAATG  798
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGCCATTGCATAGTTTGGAGATCTTGACCTAAACACAAAGGGAAAAATG  800

seq1  TCTGAACATCAACATTTTGTCTTTGAATCC-GGACTGTAGATTCAACGTT  847
      ||||||||||||| |||||||||| ||||| ||||||||||||| |||||
seq2  TCTGAACATCAAC-TTTTGTCTTTTAATCCGGGACTGTAGATTC-ACGTT  848

seq1  AGCAGCCACCAACACTCTTGGCACTGTGTCTTTTGTAGAATCGCAGACCA  897
      ||||||||||||||||||||||||||||||||||||| ||||||| | ||
seq2  AGCAGCCACCAACACTCTTGGCACTGTGTCTTTTGTAAAATCGCA-AACA  897

seq1  TATCCTGTCCCTCCTGAGGCATGATA-AACCTTTATGTCCTTTAATAACG  946
      |||||||||||||||||||||||||| | ||||||||||||||||| |||
seq2  TATCCTGTCCCTCCTGAGGCATGATATATCCTTTATGTCCTTTAAT-ACG  946

seq1  TTTGCCATATATTTTGGCACAAGAAT-GAGTGAAGTGACAAAAAGTCAAT  995
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTGCCATATATTTTGGCACAAGAATGGAGTGAAGTGACAAAAAGTCAAT  996

seq1  ACTTTTTAATAAGAAGAAAACATAAATAACATTCAAATA-GCAAGAAAGA  1044
      ||||||| |||||||  |||||| |||||||||||||||  || |||  |
seq2  ACTTTTT-ATAAGAAAGAAACATTAATAACATTCAAATACTCAGGAAGAA  1045

seq1  TGAACAAAT-ATACAGCATTTCTTAGGGTTAAAAACAGATTCGGTGCTGT  1093
      |  |||||| |||||||||||||||||||||||||||||| |||||  ||
seq2  TAGACAAATAATACAGCATTTCTTAGGGTTAAAAACAGATCCGGTGGCGT  1095

seq1  GGCATGAAAAATGCCAGTTTTGTA-TCTTAA  1123
      |||| ||||||||||||||||||| ||||||
seq2  GGCAAGAAAAATGCCAGTTTTGTATTCTTAA  1126

seq1: chr3_150221599_150222685
seq2: B6Ng01-024L11.g_69_1155 (reverse)

seq1  TAATACTGAATGAATTG--AAAGACATTTTTTGTCATTACTGTATTTTAT  48
      |||||||| ||  ||||  ||||||  |||||||||||||||||||||||
seq2  TAATACTG-ATAGATTGAAAAAGACCATTTTTGTCATTACTGTATTTTAT  49

seq1  TTTCAGAATGT-GCCTCATTAAATTGTCAGGTCTAACAGTGAAGTTGTTC  97
      ||||||||||| |||||  |||| ||||||||||||||||| |  || ||
seq2  TTTCAGAATGTGGCCTCCATAAAATGTCAGGTCTAACAGTGGAAGTG-TC  98

seq1  TGTAGCCTAGGCACGTATGTTAATCATGCCTCAGCCTCAAGTGGCTGGTA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTAGGCACGTATGTTAATCATGCCTCAGCCTCAAGTGGCTGGTA  148

seq1  TTAATGGCTATTGTCACTATGTCCAGTAGAAAAGTGGACTCAAGGAAAGA  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TAATGGCTATTGTCACTATGTCCAGTAGAAAAGTGGACTCAAGGAAAGA  197

seq1  GACACAAAACATTACTCATTATAAAAGTGGGGACAATGGTCGCATCCAGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAAACATTACTCATTATAAAAGTGGGGACAATGGTCGCATCCAGT  247

seq1  ATACACTTTGTTTTGGAATTGTTCATTTGCACTAACTTATTTAGTTTATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTTTGTTTTGGAATTGTTCATTTGCACTAACTTATTTAGTTTATT  297

seq1  CAATTGCTCATAGTAGTGTGCATCTTAGCAGCACTCATCCTTAAGAAAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTCATAGTAGTGTGCATCTTAGCAGCACTCATCCTTAAGAAAGG  347

seq1  AGTTTGCCATGCTCTGGATATTCAATTTATGTTGCTTAAGTTGAAATACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCCATGCTCTGGATATTCAATTTATGTTGCTTAAGTTGAAATACA  397

seq1  TGAACACATTTTATCACTGGTTTTGTTTATAAATATTAAATTGATGACCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACATTTTATCACTGGTTTTGTTTATAAATATTAAATTGATGACCC  447

seq1  AATGTAACAAATCTAGTAAATGACTTCACACTGTAAATAGCTGGCTCCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAACAAATCTAGTAAATGACTTCACACTGTAAATAGCTGGCTCCTC  497

seq1  CAGAACAAAAGCTTTAAGCTCTTCCCAGGGGGGTTCATGTTGGTCGTGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAAAAGCTTTAAGCTCTTCCCAGGGGGGTTCATGTTGGTCGTGAC  547

seq1  CTTGTAGAAAATTTAAAATTAAATACATATTTTGGTATCAAATGAATTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGAAAATTTAAAATTAAATACATATTTTGGTATCAAATGAATTAT  597

seq1  TTAGCAGTTTTGAGCAGTGTAAAAAAACAAATGTAAGCCAGGCGTGGTGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGTTTTGAGCAGTGTAAAAAAACAAATGTAAGCCAGGCGTGGTGG  647

seq1  TGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGTATTTCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGTATTTCTG  697

seq1  AGTTGGAGGCTAGTCTGGTCTCCAAAGTGAGTTCCAGGACAGCCAGGGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAGGCTAGTCTGGTCTCCAAAGTGAGTTCCAGGACAGCCAGGGCT  747

seq1  ATACAGAGAAACCCTGTCTCGAAAAAAAAAATGCATTTGGTTCCTAAAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAAACCCTGTCTCGAAAAAAAAAATGCATTTGGTTCCTAAAAT  797

seq1  TACAAATTTGTAGACTGAAGTAAAACTATGACATATCTGCTATTTGTCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTTGTAGACTGAAGTAAAACTATGACATATCTGCTATTTGTCTG  847

seq1  TTTTATTGTTGTGATTGCTTGTGATTGTGCTTAATTTAAAAAGTCCATGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTTGTGATTGCTTGTGATTGTGCTTAATTTAAAAAGTCCATGT  897

seq1  GTATCATAGCCTATACTTCTTAGTGGACTTACTCTCTTAGAATTCTTTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATAGCCTATACTTCTTAGTGGACTTACTCTCTTAGAATTCTTTTT  947

seq1  CAATTAAAACAAAACAGCTCCACATTTAATATAATTTAGATTAAGAAGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAAACAAAACAGCTCCACATTTAATATAATTTAGATTAAGAAGAA  997

seq1  AGAATAGCTTGTTGGCTTTATAATTTCAGGAATACATTTTTAAAAATCAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCTTGTTGGCTTTATAATTTCAGGAATACATTTTTAAAAATCAT  1047

seq1  ATATGACTAATTATAAATCCAATAAAGATCGGATGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTAATTATAAATCCAATAAAGATCGGATGAATTC  1087