BAC Information

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BAC

Clone NameB6Ng01-025D08
Chromosome3 (Build37)
Map Location 111,433,287 - 111,434,464
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043190, LOC668712
Downstream geneLOC625585, EG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025D08.bB6Ng01-025D08.g
ACCDH856627DH856628
length8011,161
definitionDH856627|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D08, 5' end.DH856628|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagatagatgccgacaacccaaataacccaattaacagtgg
gaatctagaatggccaagaaatgcctaaagaaatattcactgtccttagt
aatcagggaagtgcaaatcaaaatgactctgactttccatcttacatcag
tctgaatgtctaagataaatatctcaggtgttagtccatgctagcaagaa
agtggagcaaggagaacattccttcattgtgggtggaagtgcaaacttgt
acaaacacttaggaaattaattcgataatttctcagaaaatgggcattgt
tatacctcaagacacagctgtgcaactcattgtcatatacctaaaatata
aacccactatactatagagacatttccccaactatgttcacagcagcttt
attcataataggcagaaactggaaacaacctacatggttctcaactaaaa
atcatacagaaaatggggtacatttacaaaatggaatatgattcagctat
taaaagcaaaagcatcatgatttttgcaggtatatggttgagacttcaga
ttatcattctgagagggaacccaatctcaaaatgacatacatagcatgta
ctcacttataagtaggtattagccataaaatacaggatacccatgctaca
ctccacagactcaaagaaggtatacaagaacgaagacccaaaggagggtg
gttgaatctcacttagaagggggtataatatagttgtaggaggcagacag
aggagagaattgggtgagagatcctatgggggagggaatgtgggtagttt
c

gaattctgttccttagaactcaataagatgtaaaacatttctgccattgg
gattaaacttgttgacttatcatgccttactggaacactgtctgccttcc
ttatatggtgattccatttaaatgcatttcatttatgtttatattttagg
aagcttctatgatagtttcagaagaccattcatgtttgctgtctctccgt
ttttccatttttcctgtcctctttacccttcttttaatcacacagctttg
tttatgttttgtcaaaatggctctctatacaaggcttgaacatgtataac
actagtaggcattcaatgtgttctttaatccttaatatataatctgtttt
cagaaacagctttattcactagagagctccattcatcaagtgaacatgtc
attctgtaccaagtaagagagtatagttaccctgaatttttccataagaa
tgttctactttcatatatatcagccttcatttcattcttggcatctatta
tataatattacatggggaaatgtagtatatgaggtttacctgaaagacat
atatcccagcactcatggtagtgtctctcgaaccactcctcccaactcat
ctttggttctgttcatttccattcagttaaacattgtgttgtgtaaattt
tcctggtaagacaaaaaataaactgctcttcacagatgaaattatatata
ttcgagaaaagcccaactttgtaaactagagtttccctcatattacttat
taggggcaattaataagaatatggaaacctcaaagataggtgcttcacca
aaacacccactcccaaatggataatattgcccgagagctgcttctttgga
gcaataagtatcacttgtagaaagcctaatcgattggaggattcactcac
ctatatagctattattggacacattccctagaattctggtatcttgtgaa
tctagtgtgtttcaggactttctatttgtgagttatttatattataaacg
tacgtgagcaacataatgggaagagtcatgtaaatgatattttatcccaa
catatttctagtggttattctgaataaataggaaaggtaatattttttct
tcttaactaataactaagattgatgatgtttacaatggttataaaggctg
tttttacatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111433287_111434464
seq2: B6Ng01-025D08.g_70_1230

seq1  GAATTCTGTTCCTTAGAACTCAATAAGATGTAAAACATTTCTGCCATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCCTTAGAACTCAATAAGATGTAAAACATTTCTGCCATTGG  50

seq1  GATTAAACTTGTTGACTTATCATGCCTTACTGGAACACTGTCTGCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACTTGTTGACTTATCATGCCTTACTGGAACACTGTCTGCCTTCC  100

seq1  TTATATGGTGATTCCATTTAAATGCATTTCATTTATGTTTATATTTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGGTGATTCCATTTAAATGCATTTCATTTATGTTTATATTTTAGG  150

seq1  AAGCTTCTATGATAGTTTCAGAAGACCATTCATGTTTGCTGTCTCTCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTATGATAGTTTCAGAAGACCATTCATGTTTGCTGTCTCTCCGT  200

seq1  TTTTCCATTTTTCCTGTCCTCTTTACCCTTCTTTTAATCACACAGCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTTTTCCTGTCCTCTTTACCCTTCTTTTAATCACACAGCTTTG  250

seq1  TTTATGTTTTGTCAAAATGGCTCTCTATACAAGGCTTGAACATGTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTTGTCAAAATGGCTCTCTATACAAGGCTTGAACATGTATAAC  300

seq1  ACTAGTAGGCATTCAATGTGTTCTTTAATCCTTAATATATAATCTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAGGCATTCAATGTGTTCTTTAATCCTTAATATATAATCTGTTTT  350

seq1  CAGAAACAGCTTTATTCACTAGAGAGCTCCATTCATCAAGTGAACATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAGCTTTATTCACTAGAGAGCTCCATTCATCAAGTGAACATGTC  400

seq1  ATTCTGTACCAAGTAAGAGAGTATAGTTACCCTGAATTTTTCCATAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTACCAAGTAAGAGAGTATAGTTACCCTGAATTTTTCCATAAGAA  450

seq1  TGTTCTACTTTCATATATATCAGCCTTCATTTCATTCTTGGCATCTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTACTTTCATATATATCAGCCTTCATTTCATTCTTGGCATCTATTA  500

seq1  TATAATATTACATGGGGAAATGTAGTATATGAGGTTTACCTGAAAGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTACATGGGGAAATGTAGTATATGAGGTTTACCTGAAAGACAT  550

seq1  ATATCCCAGCACTCATGGTAGTGTCTCTCGAACCACTCCTCCCAACTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCAGCACTCATGGTAGTGTCTCTCGAACCACTCCTCCCAACTCAT  600

seq1  CTTTGGTTCTGTTCATTTCCATTCAGTTAAACATTGTGTTGTGTAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTCTGTTCATTTCCATTCAGTTAAACATTGTGTTGTGTAAATTT  650

seq1  TCCTGGTAAGACAAAAAATAAACTGCTCTTCACAGATGAAATTATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTAAGACAAAAAATAAACTGCTCTTCACAGATGAAATTATATATA  700

seq1  TTCGAGAAAAGCCCAACTTTGTAAACTAGAGTTTCCCTCATATTACTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGAAAAGCCCAACTTTGTAAACTAGAGTTTCCCTCATATTACTTAT  750

seq1  TAGGGGCAATTAATAAGAATATGGAAACCTCAAAGATAGGTGCTTCACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCAATTAATAAGAATATGGAAACCTCAAAGATAGGTGCTTCACCA  800

seq1  AAACACCCACTCCCAAATGGATAATATTGCCCGAGAGCTGCTTCTTTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCCACTCCCAAATGGATAATATTGCCCGAGAGCTGCTTCTTTGGA  850

seq1  GCAATAAGTATCACTTGTAGAAAGCCTAATCGATTGGAGGATTCACTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAGTATCACTTGTAGAAAGCCTAATCGATTGGAGGATTCACTCAC  900

seq1  CTATATAGCTATTATTGGACACATTCCCCTAGAATTCTGGTATCTTGTGA  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTATATAGCTATTATTGGACACATT-CCCTAGAATTCTGGTATCTTGTGA  949

seq1  ATCTAGTGTGTTTCAGGAACTTTCTATTTGTGAGTTATTTATATTATAAA  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCTAGTGTGTTTCAGG-ACTTTCTATTTGTGAGTTATTTATATTATAAA  998

seq1  CGTACGTGAGCAAACATAATGGAAAGAGTCAATGTAAATGATA-TTTATC  1049
      ||||||||||| |||||||||| ||||||| |||||||||||| ||||||
seq2  CGTACGTGAGC-AACATAATGGGAAGAGTC-ATGTAAATGATATTTTATC  1046

seq1  ACAACATTAATTTCTAAGGTGTTTATTCTGATTAAATAGGAAAGTTAATA  1099
       ||||||  |||||||  ||| ||||||||| |||||||||||| |||||
seq2  CCAACAT--ATTTCTA--GTGGTTATTCTGAATAAATAGGAAAGGTAATA  1092

seq1  -TTTTTCTTCTTAAACTAATAAACTAAAGATTTGATGATGTTTTACAATG  1148
       ||||||||||| ||||||| |||| |||| ||||||||| |||||||||
seq2  TTTTTTCTTCTT-AACTAAT-AACT-AAGA-TTGATGATG-TTTACAATG  1137

seq1  GATAAATAAAGGACATGTTTTTATACATAT  1178
      | |  |||||||   ||||||  |||||||
seq2  GTT--ATAAAGG--CTGTTTT--TACATAT  1161


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