BAC Information

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BAC

Clone NameB6Ng01-025F11
Chromosome3 (Build37)
Map Location 69,407,718 - 69,533,721
singlet/doubletdoublet
Overlap geneRpl32-ps, Nmd3
Upstream geneSchip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4, Arl14, Ppm1l, LOC667309, B3galnt1
Downstream geneLOC100041334, 1110032A04Rik, Gm414, LOC100041384, LOC625868, LOC670542
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025F11.bB6Ng01-025F11.g
ACCDH856721DH856722
length4031,048
definitionDH856721|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F11, 5' end.DH856722|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,407,718 - 69,408,126)(69,532,681 - 69,533,721)
sequence
caccatgtgttcaacccagggacgtgtaagaggggagagaaacttcagtt
tcagattgccaaatttaagtaacttagaactgtgacataaatctctacat
tttaattctaacactagctgttgtttgtgtgccttgcctcatactgagtt
ggcctgtctgtcataattgtaagcgctcactcacttttcagagtagagat
gtgtgtcacgacactatgagcgatcataggaaagaaaccagggccctgcc
tgccactctgccataacttggaacatgtttcatagatatgtaaggatctc
actgagacttaatgatgcttaaagacaggatatttgcttagttcacacaa
ttaaaacaaacaatccaccactacctacagactccagaagaaaagcgtgc
acc
gaattcactttcagaagaacatatgggtaagcatggtggtacatacacct
tttttccagcactcagaagtaaaagcaggagatctctgaattccaaacca
gcctagtctactaagctctaggccaccaagtactaactacctagtgagaa
cctatcttaaacaaaaacaaaacctttatttaaagagactattgaacaca
ccaattctgagcaattgtagctagtcacctaatcatgtcagaagaccaaa
agataacaaaagactaagacttagattgtattcttccttttaagccattt
agtccataaaataatttaaccctagtccctcattctcactacgtgtactt
taaccatgtttagaaaaagtgagcagcttacctctttctgaattgtcaat
ttaactttaagtctcttggaatggggctcagtccaaacaaagcctgcatc
gacaagccgaaccttcaataggggaaaaaaagaaatataagtccccacca
gagaggtggaaagatgactgactatctcattaataagcagactctcaaca
gagatgcttaaaccagcagctaataggaatagatgtagagacccacagcc
aaacattaggcagagagcacactaaaattggagctctaccaggtccttcc
catgaagctcagggaacccctggaaaggggtgggggactgtaggagccag
aggtaagacaccaggagaacatggcccacagaatcaactgagcaagctca
caggggctcacacagactgaagcagcaatcatgaaagctgcatggggcta
cctggggctgcactaggtcctatacatatcttatatagcttggtgtttct
gtgggacttctaacagtaggagtgtgaagtgttttgtctgttcttggggc
ccttttcctcctactggttactctgcccagccttgaggagatatgtgcct
agtattactgtatctgtactctttcatgttcggctgacatcatgggaagc
tgatcttttctgaaagaaatggaggagtgcatctgggaaatggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_69407718_69408126
seq2: B6Ng01-025F11.b_33_441

seq1  GAATTCCACCATGTGTTCAACCCAGGGACGTGTAAGAGGGGAGAGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCATGTGTTCAACCCAGGGACGTGTAAGAGGGGAGAGAAACT  50

seq1  TCAGTTTCAGATTGCCAAATTTAAGTAACTTAGAACTGTGACATAAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTCAGATTGCCAAATTTAAGTAACTTAGAACTGTGACATAAATCT  100

seq1  CTACATTTTAATTCTAACACTAGCTGTTGTTTGTGTGCCTTGCCTCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTTAATTCTAACACTAGCTGTTGTTTGTGTGCCTTGCCTCATAC  150

seq1  TGAGTTGGCCTGTCTGTCATAATTGTAAGCGCTCACTCACTTTTCAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGGCCTGTCTGTCATAATTGTAAGCGCTCACTCACTTTTCAGAGT  200

seq1  AGAGATGTGTGTCACGACACTATGAGCGATCATAGGAAAGAAACCAGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTGTGTCACGACACTATGAGCGATCATAGGAAAGAAACCAGGGC  250

seq1  CCTGCCTGCCACTCTGCCATAACTTGGAACATGTTTCATAGATATGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCCACTCTGCCATAACTTGGAACATGTTTCATAGATATGTAAG  300

seq1  GATCTCACTGAGACTTAATGATGCTTAAAGACAGGATATTTGCTTAGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCACTGAGACTTAATGATGCTTAAAGACAGGATATTTGCTTAGTTC  350

seq1  ACACAATTAAAACAAACAATCCACCACTACCTACAGACTCCAGAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTAAAACAAACAATCCACCACTACCTACAGACTCCAGAAGAAAA  400

seq1  GCGTGCACC  409
      |||||||||
seq2  GCGTGCACC  409

seq1: chr3_69532681_69533721
seq2: B6Ng01-025F11.g_68_1099 (reverse)

seq1  ATGCACTCCTCCATTTCCTTTCAGAAAAGATCAGGCTTCCCATGGATGTC  50
      |||||||||||||||| |||||||||||||||| ||||||||| ||||||
seq2  ATGCACTCCTCCATTT-CTTTCAGAAAAGATCA-GCTTCCCAT-GATGTC  47

seq1  AGCCGAACATGGAATAGAGTAACAAGATACAGTAATACTAGGCACATATC  100
      |||||||||||  | ||||||   ||||||||||||||||||||||||||
seq2  AGCCGAACATG--AAAGAGTA--CAGATACAGTAATACTAGGCACATATC  93

seq1  TCCCTCAAGGCTGGGCAGAGTAACCCAGTAGGAGGAAAAGGGCCCCAAGA  150
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  T-CCTCAAGGCTGGGCAGAGTAA-CCAGTAGGAGGAAAAGGGCCCCAAGA  141

seq1  ACAGACAAAACACTTCACACTCCTACTGTTAGAAGTCCCACAGAAACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAAAACACTTCACACTCCTACTGTTAGAAGTCCCACAGAAACACC  191

seq1  AAGCTATATAAGATATGTATAGGACCTAGTGCAGCCCCAGGTAGCCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATATAAGATATGTATAGGACCTAGTGCAGCCCCAGGTAGCCCCAT  241

seq1  GCAGCCTTCATGATTGCTGCTTCAGTCTGTGTGAGCCCCTGTGAGCTTGC  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTTCATGATTGCTGCTTCAGTCTGTGTGAGCCCCTGTGAGCTTGC  291

seq1  TCAGTTGATTCTGTGGGCCATGTTCTCCTGGTGTCTTACCTCTGGCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGATTCTGTGGGCCATGTTCTCCTGGTGTCTTACCTCTGGCTCCT  341

seq1  ACAGTCCCCCACCCCTTTCCAGGGGTTCCCTGAGCTTCATGGGAAGGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCCCCACCCCTTTCCAGGGGTTCCCTGAGCTTCATGGGAAGGACC  391

seq1  TGGTAGAGCTCCAATTTTAGTGTGCTCTCTGCCTAATGTTTGGCTGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGCTCCAATTTTAGTGTGCTCTCTGCCTAATGTTTGGCTGTGGG  441

seq1  TCTCTACATCTATTCCTATTAGCTGCTGGTTTAAGCATCTCTGTTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACATCTATTCCTATTAGCTGCTGGTTTAAGCATCTCTGTTGAGAG  491

seq1  TCTGCTTATTAATGAGATAGTCAGTCATCTTTCCACCTCTCTGGTGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTATTAATGAGATAGTCAGTCATCTTTCCACCTCTCTGGTGGGGA  541

seq1  CTTATATTTCTTTTTTTCCCCTATTGAAGGTTCGGCTTGTCGATGCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTCTTTTTTTCCCCTATTGAAGGTTCGGCTTGTCGATGCAGGC  591

seq1  TTTGTTTGGACTGAGCCCCATTCCAAGAGACTTAAAGTTAAATTGACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGGACTGAGCCCCATTCCAAGAGACTTAAAGTTAAATTGACAAT  641

seq1  TCAGAAAGAGGTAAGCTGCTCACTTTTTCTAAACATGGTTAAAGTACACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGAGGTAAGCTGCTCACTTTTTCTAAACATGGTTAAAGTACACG  691

seq1  TAGTGAGAATGAGGGACTAGGGTTAAATTATTTTATGGACTAAATGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGAATGAGGGACTAGGGTTAAATTATTTTATGGACTAAATGGCTT  741

seq1  AAAAGGAAGAATACAATCTAAGTCTTAGTCTTTTGTTATCTTTTGGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGAATACAATCTAAGTCTTAGTCTTTTGTTATCTTTTGGTCTT  791

seq1  CTGACATGATTAGGTGACTAGCTACAATTGCTCAGAATTGGTGTGTTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATGATTAGGTGACTAGCTACAATTGCTCAGAATTGGTGTGTTCAA  841

seq1  TAGTCTCTTTAAATAAAGGTTTTGTTTTTGTTTAAGATAGGTTCTCACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCTTTAAATAAAGGTTTTGTTTTTGTTTAAGATAGGTTCTCACTA  891

seq1  GGTAGTTAGTACTTGGTGGCCTAGAGCTTAGTAGACTAGGCTGGTTTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTAGTACTTGGTGGCCTAGAGCTTAGTAGACTAGGCTGGTTTGGA  941

seq1  ATTCAGAGATCTCCTGCTTTTACTTCTGAGTGCTGGAAAAAAGGTGTATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGATCTCCTGCTTTTACTTCTGAGTGCTGGAAAAAAGGTGTATG  991

seq1  TACCACCATGCTTACCCATATGTTCTTCTGAAAGTGAATTC  1041
      |||||||||||||||||||||||||||||||||||||||||
seq2  TACCACCATGCTTACCCATATGTTCTTCTGAAAGTGAATTC  1032