MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-025I20
Chromosome	3 (Build37)
Map Location	30,806,416 - 30,807,576
singlet/doublet	singlet
Overlap gene	Phc3
Upstream gene	Evi1, Mds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7, Tloc1, Gpr160
Downstream gene	LOC100040809, Prkci, Skil, Cldn11, Slc7a14, LOC625125, Kcnmb2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Evi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14013 MGI:95457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mds1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17251 MGI:1329024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040727 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100040734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040749 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Arpm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76652 MGI:1923902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mynn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80732 MGI:1931415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71827 MGI:1919077
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930558O21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68307 MGI:1915557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E230002P03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320352 MGI:2443864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Samd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75953 MGI:1923203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tloc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69276 MGI:1916526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr160 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 33 ESTs, 3 Proteins

name	Phc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241915 MGI:2181434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040809 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Prkci (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18759 MGI:99260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Skil (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20482 MGI:106203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cldn11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18417 MGI:106925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc7a14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241919 MGI:3040688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625125 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	Kcnmb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72413 MGI:1919663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Evi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679704 GeneID:14013 MGI:95457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ecotropic viral integration site 1 transcript_id : NM_007963.1

name	Mds1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130468 GeneID:17251 MGI:1329024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myelodysplasia syndrome 1 homolog (human) transcript_id : NM_021442.2

name	LOC100040727 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250862 GeneID:100040727
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040727 transcript_id : XM_001475142.1

name	Arpm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376348 GeneID:76652 MGI:1923902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin related protein M1 transcript_id : NM_029690.2

name	Mynn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41056112 GeneID:80732 MGI:1931415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myoneurin transcript_id : NM_030557.2

name	Lrrc34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625842 GeneID:71827 MGI:1919077
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 34 transcript_id : NM_027941.1

name	4930558O21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286819 GeneID:68307 MGI:1915557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930558O21 gene transcript_id : NM_026668.2

name	Samd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802080 GeneID:75953 MGI:1923203
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sterile alpha motif domain containing 7 transcript_id : NM_029489.2

name	Tloc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370366 GeneID:69276 MGI:1916526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocation protein 1 transcript_id : NM_027016.2

name	Gpr160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369476 GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 3 Proteins product : G protein-coupled receptor 160, transcript variant 4 transcript_id : XM_977547.1

name	Gpr160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369478 GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 30 ESTs, 3 Proteins product : G protein-coupled receptor 160, transcript variant 3 transcript_id : XM_896590.2

name	Gpr160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250831 GeneID:71862 MGI:1919112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, 3 Proteins product : G protein-coupled receptor 160, transcript variant 1 transcript_id : XM_130823.7

name	Phc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24025667 GeneID:241915 MGI:2181434
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polyhomeotic-like 3 (Drosophila) transcript_id : NM_153421.1

name	Prkci (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778988 GeneID:18759 MGI:99260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, iota transcript_id : NM_008857.3

name	Skil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84875516 GeneID:20482 MGI:106203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SKI-like transcript_id : NM_011386.2

name	Skil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84875519 GeneID:20482 MGI:106203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SKI-like transcript_id : NM_001039090.1

name	Cldn11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130649 GeneID:18417 MGI:106925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 11 transcript_id : NM_008770.2

name	Slc7a14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254250 GeneID:241919 MGI:3040688
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 transcript_id : NM_172861.2

name	Kcnmb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560079 GeneID:72413 MGI:1919663
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium large conductance calcium-activated channel, subfamily M, beta member 2 transcript_id : NM_028231.2

name	Evi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679705 CCDS:CCDS17281.1 GeneID:14013 MGI:95457
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0042127 - regulation of cell proliferation [Evidence IMP] codon_start : 1 product : ecotropic viral integration site 1 protein_id : NP_031989.1

name	Mds1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946816 GeneID:17251 MGI:1329024
definition	codon_start : 1 product : myelodysplasia syndrome 1 protein homolog protein_id : NP_067417.1

name	LOC100040727 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250863 GeneID:100040727
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475192.1

name	Arpm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037457 CCDS:CCDS17283.1 GeneID:76652 MGI:1923902
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : actin related protein M1 protein_id : NP_083966.1

name	Mynn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41056113 CCDS:CCDS17284.1 GeneID:80732 MGI:1931415
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : myoneurin protein_id : NP_085034.2

name	Lrrc34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625843 GeneID:71827 MGI:1919077
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 34 protein_id : NP_082217.1

name	4930558O21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286820 GeneID:68307 MGI:1915557
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68307 protein_id : NP_080944.2

name	Samd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037437 CCDS:CCDS17285.1 GeneID:75953 MGI:1923203
definition	codon_start : 1 product : sterile alpha motif domain containing 7 protein_id : NP_083765.1

name	Tloc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930429 CCDS:CCDS17286.1 GeneID:69276 MGI:1916526
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : translocation protein 1 protein_id : NP_081292.1

name	Gpr160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51707593 GeneID:71862 MGI:1919112
definition	codon_start : 1 product : G protein-coupled receptor 160 isoform 1 protein_id : XP_130823.3

name	Gpr160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82889098 GeneID:71862 MGI:1919112
definition	codon_start : 1 product : G protein-coupled receptor 160 isoform 3 protein_id : XP_901683.1

name	Gpr160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369477 GeneID:71862 MGI:1919112
definition	codon_start : 1 product : G protein-coupled receptor 160 isoform 4 protein_id : XP_982641.1

name	Phc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24025668 CCDS:CCDS17288.1 GeneID:241915 MGI:2181434
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007275 - development [Evidence IEA] codon_start : 1 exception : mismatches in translation function : developmental regulator note : polyhomeotic 3 product : polyhomeotic-like 3 protein_id : NP_700470.1

name	Prkci (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778989 CCDS:CCDS17289.1 GeneID:18759 MGI:99260
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS]; GO:0000133 - polarisome [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0004700 - atypical protein kinase C activity [Evidence IEA] [Evidence ISS]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005543 - phospholipid binding [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007015 - actin filament organization [Evidence IMP]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence ISS]; GO:0045197 - establishment and/or maintenance of epithelial cell polarity [Evidence ISS]; GO:0035089 - establishment of apical/basal cell polarity [Evidence IMP]; GO:0042462 - eye photoreceptor cell development [Evidence IMP]; GO:0045216 - intercellular junction assembly and maintenance [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0016044 - membrane organization and biogenesis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006612 - protein targeting to membrane [Evidence ISS]; GO:0046903 - secretion [Evidence ISS]; GO:0016192 - vesicle-mediated transport [Evidence ISS] codon_start : 1 note : protein kinase C, lambda product : protein kinase C, iota protein_id : NP_032883.2

name	Skil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84875517 GeneID:20482 MGI:106203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; ski/sno related product : SKI-like isoform a protein_id : NP_035516.2

name	Skil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84875520 GeneID:20482 MGI:106203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; ski/sno related product : SKI-like isoform b protein_id : NP_001034179.1

name	Cldn11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679186 CCDS:CCDS17290.1 GeneID:18417 MGI:106925
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence TAS] [Evidence ISS] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008366 - axon ensheathment [Evidence IMP]; GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS]; GO:0007155 - cell adhesion [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : oligodendrocyte transmembrane protein; oligodendrocyte-specific protein product : claudin 11 protein_id : NP_032796.1

name	Slc7a14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370304 CCDS:CCDS17291.1 GeneID:241919 MGI:3040688
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 7, member 14 protein_id : NP_766449.1

name	LOC100040734 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040734
definition	number : 2 pseudo : _no_value

name	LOC100040734 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040734
definition	number : 1 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 1 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 2 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 3 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 4 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 5 pseudo : _no_value

name	LOC100040749 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040749
definition	number : 6 pseudo : _no_value

name	LOC100040809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040809
definition	number : 1 pseudo : _no_value

name	LOC100040809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040809
definition	number : 2 pseudo : _no_value

name	E230002P03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250865 GeneID:320352 MGI:2443864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : RIKEN cDNA E230002P03 gene transcript_id : XR_002334.2

name	LOC625125 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250832 GeneID:625125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : hypothetical LOC625125 pseudo : _no_value transcript_id : XR_031683.1

clone name	MSMg01-075M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172A09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527P05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-103M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-084P02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159E21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317P02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-025I20.b	B6Ng01-025I20.g
ACC	DH856868	DH856869
length	1,134	1,050
definition	DH856868\|Mus musculus domesticus DNA, BAC clone: B6Ng01-025I20, 5' end.	DH856869\|Mus musculus domesticus DNA, BAC clone: B6Ng01-025I20, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccatgagaagacagagttacacacaattagagttctgttgtcact gggtgtgagagctcacaacagaggctgagaagccaatgtgctacaaggcc tggagctcacccttgaagaagtcaaaaaaccattacacaagaggaatcag gcaacatatcctatttctcatgcaaaagaactgcattgctaggttttaca cctcatggactcatctttgcataacatagttccacatacagggagagagg aataaaatgttttgctataaataataatctggaaatattttctcaaactt cagattaagctttcattcccactataccttttctgaatttgcatgcctca tgtatatctaacagtactttcactgttcccccaggattgctgtattaaca tgttataatgttgctgacatacatcatgctgctcaacttataacatcaac ttcaaagtttaatatcactagacttctatttttcatttctattttctaac aatctgtatagcccagggtggtcttaaacgtattatcctgatttcccgat acatgctaggattacaggaaagtaccataatacacacacacacacgcaca cgcacatacacacacactcttttaaatggagctgggaacggaacccagag ctctagggatggctggcaagtgctctcctcctgaacacttcagcacatct ctggctctcctcagctgacttttggaaagaaaacaagctgtcactggaat tacaaagctgcagggtagtctcctgccagggaccggcgccctcaacctag ggcaagcgctcgccacctgacccttgactgcttctcttgtctacagcaca cgtgctcagccaccttacccgtcactcccctttctttgtaagcgaacctc aagtcagtatgaagtacagaacccatagaagagatatgcaagacatgacg gcttccttcaaatagtaagtatggaagttagctaagaacagcacctacag ctttaagcctttttttgtatattcaatcagattccaagaagctaggactc agatgaggaaaaaagagaacggcctgccgtaccctgatacaccgctttcc tgatgatctctttcactgtaatcccctctggcca	gaattcagtccctattgcactgggacacgtacaaaccagagcatacatct tggtctttgtgccagccattcccaagtctatgtcctttccttggcatctg ttacctttcacaacttaaatgaccgacaaaagccatgtgttgaaaactcg ggaggtactggagcctataagaggtagggcctgatggaaggaaggactgt aggagagtgcccttgaggaggctattgggaccttgtccccaacctctcct ttcccagtcaccaggaggggaacagcactccttcacatactcactaccat gatattttgccttgccacaggtctaaaggcacaagggctttctgcatggg gagtgagacctatgaaactataagcctgatacatctttattccttttaaa ttgattatttatggtactttgtcatcaagagggcttgggaagacaattca gtggttaaagtgcctgccaagcaactgggagagctggagtttgtatcccc agattctgaaaggatcccaggtggcttggagacctgcctgtgattctagc ttcaggaggcagagatgagagatctccagagcaaggtggccagcaagact aagctgcatcttgaagctctgggtttgattaagaggccctgcctcaaaga ataaggtaggaggatgtgatggtttgtatatgctcagcccagggagtggc actattagaggtgtagccctgttggagtaggtatgtcactgtgaacgtgg gctattataccctcatcctagctgcctggaagccagtattctgctagcag ccttcagatgaagattagaactcttcagctcctcctgcacatgcctgctt ggatgctgccatgctcctgccatgattactatggtgactgaacctttgac cctgagggccaccccattaaatgttgcctttataaacctaccttggtatg ttgctgtcccagcggataaacttaattaaaccagaatatcataactgatt ctgggcctagatgttgctcctgggtaaatacccctcgctctagctgatgc
quality values	Open. Hide. 53 43 32 32 50 61 32 23 61 61 61 55 61 61 55 61 50 38 55 61 55 61 61 55 61 52 17 14 23 19 11 13 28 14 12 32 41 59 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 28 23 30 23 30 26 32 59 61 59 61 61 59 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 61 61 59 61 61 61 61 59 61 59 61 52 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 55 59 59 59 61 59 59 59 61 59 61 61 61 61 61 59 30 55 59 59 59 59 52 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 59 59 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 59 61 61 59 59 59 61 59 61 61 61 61 59 59 61 52 59 55 55 59 59 59 59 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 61 59 59 59 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 59 59 61 61 59 61 43 52 41 35 23 49 61 59 61 61 59 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 49 61 59 52 61 59 59 61 55 55 55 52 61 61 61 61 61 61 52 49 55 55 49 52 41 52 19 24 19 8 25 17 55 55 55 61 55 52 52 55 52 55 52 55 49 55 43 55 50 55 50 47 47 61 49 61 55 61 55 61 55 61 55 55 43 47 38 39 49 41 50 50 61 61 61 26 30 61 47 47 61 47 61 43 43 61 61 61 61 55 38 38 38 50 53 52 50 61 53 53 50 61 50 50 53 43 61 47 50 53 61 50 50 61 61 32 43 61 61 27 31 42 32 32 50 40 61 61 43 43 50 53 53 50 53 52 35 29 27 24 33 33 52 50 53 39 42 45 52 50 61 61 53 61 53 53 42 22 50 45 45 61 61 48 53 52 40 50 36 35 45 15 42 57 47 47 53 22 33 31 47 22 53 53 53 53 38 50 53 40 43 45 43 28 22 13 47 50 53 38 47 43 50 42 34 26 30 57 50 38 38 45 40 42 25 9 30 57 34 50 42 45 50 33 37 35 32 50 30 35 23 11 34 35 34 18 25 25 31 32 30 42 53 52 45 33 38 41 38 36 32 39 7 18 23 16 28 18 27 36 42 45 38 27 30 47 14 14 32 36 16 38 53 27 50 36 53 6 12 34 31 36 43 32 42 41 32 32 32 33 38 53 21 31 20 23 32 30 32 22 48 31 38 35 21 24 29 33 22 20 17 10 34 33 14 36 33 25 40 31 23 53 33 23 17 23 22 21 31 39 41 13 10 8 5 8 6 5 10 13 10 6 14 12 14 37 20 29 31 15 27 20 44 25 11 25 20 31 6 7 5 21 12 32 20 22 9 29 20 22 14 15 38 34 21 36 16 23 7 13 12 41 23 8 29 13 20 14 29 15 29 13 29 29 19 29 20 14 20 29 28 30 19 41 33 39 30 23 18 33 10 10 8 22 8 11 29 26 18 45 47 27 29 12 10 12 20 31 28 15 34 13 20 9 11 43 29 13 14 43 34 20 13 13 14 17 19 28 11 17 12 29 23 27 31 51 13 19 10 7 8 10 16 30 51 18 14 15 8 5 7 6 8 5 16 5 19 28 36 27 10 7 5 7 10 19 13 20 17 23 15 9 24 13 19 12 9 11 10 13 12 22 20 5 6 18 10 14 12 5 23 5 13 11 10 15 10 7 6 5 12 22 8 9 32 9 9 23 6 5 16 15 8 10 17 23 18 11 5 5 5 12 8 9 12 11 6 7 21 18 11 7 25 7 23 10 7 6 15 13 5 5 28 7 33 14 19 7 6 14 9 10 17 10 8 5 5 5 15 7 9 11 31 26 18 18 14	Open. Hide. 43 37 28 47 14 10 10 6 11 11 11 10 14 11 19 52 55 37 37 41 52 52 43 49 40 49 43 49 36 52 43 52 43 43 43 52 52 43 39 61 52 52 52 59 52 59 43 59 49 41 27 30 19 36 36 59 55 59 61 61 61 59 59 49 45 59 59 52 61 61 59 59 59 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 59 59 52 52 59 61 61 61 61 61 59 61 61 61 61 61 59 59 59 59 59 59 59 52 45 45 52 59 61 59 59 59 49 59 52 49 50 43 43 52 52 52 43 59 59 41 59 59 59 59 59 59 52 59 59 59 59 49 59 59 61 59 61 59 59 59 59 59 52 59 52 41 49 43 34 49 36 41 36 59 41 59 59 52 49 59 59 52 59 59 59 59 59 59 52 59 59 43 59 59 59 41 59 59 43 59 61 59 59 43 59 61 52 61 59 59 61 61 61 61 61 59 61 59 52 59 61 52 61 55 61 61 61 61 61 52 55 61 55 55 61 61 61 61 61 55 52 52 37 52 49 52 55 55 61 61 55 61 61 61 52 52 52 49 49 52 55 43 52 52 43 33 36 36 41 55 55 52 55 55 52 49 49 52 52 55 61 61 61 55 55 52 49 52 49 55 52 52 52 52 49 52 52 55 55 52 52 55 55 55 52 52 61 61 61 61 61 61 61 61 61 61 55 61 55 61 55 52 61 55 55 61 55 61 55 52 61 52 52 55 50 50 55 61 61 55 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 55 61 61 55 61 55 55 61 55 55 55 61 55 55 55 61 50 55 50 55 49 55 49 43 47 47 49 43 61 55 61 61 61 61 61 50 61 61 61 61 61 55 55 55 50 55 55 55 55 61 55 55 55 55 61 61 61 55 55 61 61 50 61 61 61 61 61 61 61 61 55 55 50 37 49 34 55 37 50 50 50 55 61 61 55 55 61 61 50 61 55 43 50 43 47 53 39 43 50 61 47 47 50 50 50 53 53 53 61 61 61 61 61 53 47 47 50 50 50 52 53 53 50 47 50 50 61 37 61 50 45 50 50 50 50 43 53 52 53 61 61 28 61 61 53 50 53 50 33 43 40 61 61 50 50 50 39 33 36 53 34 39 53 52 37 50 42 53 29 47 61 50 53 50 47 33 53 31 41 39 50 50 46 43 50 52 61 52 45 45 45 53 50 50 45 53 53 53 33 53 23 19 43 40 23 38 28 47 35 61 45 30 16 38 52 29 47 35 39 35 42 53 45 43 39 24 61 28 38 47 42 43 61 34 61 50 52 53 38 42 45 45 53 53 47 50 40 38 53 42 53 52 47 45 34 52 52 41 39 47 46 53 31 52 52 53 50 47 42 47 47 39 45 30 53 24 45 28 45 26 57 20 47 21 53 47 32 50 45 52 40 53 14 28 42 24 37 37 30 47 25 8 32 21 35 17 46 26 6 47 20 14 20 7 11 20 23 32 37 23 57 39 47 19 32 45 28 34 32 43 37 45 39 14 17 25 47 42 16 31 39 43 23 30 38 38 28 32 50 47 24 33 28 20 13 23 18 28 16 21 31 25 22 35 46 46 34 42 30 41 39 52 25 9 34 45 12 43 31 20 21 29 24 45 26 34 27 31 27 24 29 27 33 25 42 57 57 39 34 29 24 28 30 19 11 9 23 57 31 17 33 27 33 23 23 14 16 12 22 30 42 42 32 21 37 32 27 25 32 33 24 25 25 27 19 7 18 19 23 36 17 33 32 17 27 27 20 40 57 37 53 28 27 10 37 16 31 38 14 9 19 5 4 5 6 18 34 21 45 19 14 22 21 21 12 11 10 19 23 15 53 53 28 30 12 20 44 18 37 40 27 40 23 17 15 30 15 11 11 21 10 22 17 16 27 14 41 15 36 30 17 23 19 25 13 31 29 24 16 29 29 23 12 11 29 19 5 24 9 17 29 8 10 17 28 34 33 27 20 18 10 13 9 10 17 32 10 26 12 12 16 30 20 17 29 13 29 17 17 33 29 27 15 19 48 21 41 19 8 11 13 10 11 7 15 5 17 9 14 25 29 18 34 6 21 43 20 21 21 17 15 26 19 9 7 9 14 8 6 6 14 18 19 26 27 23 17 9 5 7 18 7 39 7 27 30 10 36 18 29 21 16 23 29 14 5 22 8 8 16 18 17 33 25 18 11 28 35 7 24 28 19 10 11 12 21 23 23 13 23 38 27 16 31 29 29 8 10 5 6 10 5 30 10 11 12 5 13 15 30 13 8 11 5 6 7 11 29 28 26 11 25 5 10 16 19 8 5 5 7 12 10 5 6 8 5 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_30806416_30807576
seq2: B6Ng01-025I20.b_43_1176

seq1  GAATTCCATGAGAAGACAGAGTTACACACAATTAGAGTTCTGTTGTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAGAAGACAGAGTTACACACAATTAGAGTTCTGTTGTCACT  50

seq1  GGGTGTGAGAGCTCACAACAGAGGCTGAGAAGCCAATGTGCTACAAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGAGAGCTCACAACAGAGGCTGAGAAGCCAATGTGCTACAAGGCC  100

seq1  TGGAGCTCACCCTTGAAGAAGTCAAAAAACCATTACACAAGAGGAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTCACCCTTGAAGAAGTCAAAAAACCATTACACAAGAGGAATCAG  150

seq1  GCAACATATCCTATTTCTCATGCAAAAGAACTGCATTGCTAGGTTTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATATCCTATTTCTCATGCAAAAGAACTGCATTGCTAGGTTTTACA  200

seq1  CCTCATGGACTCATCTTTGCATAACATAGTTCCACATACAGGGAGAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGGACTCATCTTTGCATAACATAGTTCCACATACAGGGAGAGAGG  250

seq1  AATAAAATGTTTTGCTATAAATAATAATCTGGAAATATTTTCTCAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGTTTTGCTATAAATAATAATCTGGAAATATTTTCTCAAACTT  300

seq1  CAGATTAAGCTTTCATTCCCACTATACCTTTTCTGAATTTGCATGCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAGCTTTCATTCCCACTATACCTTTTCTGAATTTGCATGCCTCA  350

seq1  TGTATATCTAACAGTACTTTCACTGTTCCCCCAGGATTGCTGTATTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCTAACAGTACTTTCACTGTTCCCCCAGGATTGCTGTATTAACA  400

seq1  TGTTATAATGTTGCTGACATACATCATGCTGCTCAACTTATAACATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAATGTTGCTGACATACATCATGCTGCTCAACTTATAACATCAAC  450

seq1  TTCAAAGTTTAATATCACTAGACTTCTATTTTTCATTTCTATTTTCTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTTTAATATCACTAGACTTCTATTTTTCATTTCTATTTTCTAAC  500

seq1  AATCTGTATAGCCCAGGGTGGTCTTAAACGTATTATCCTGATTTCCCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTATAGCCCAGGGTGGTCTTAAACGTATTATCCTGATTTCCCGAT  550

seq1  ACATGCTAGGATTACAGGAAAGTACCATAATACACACACACACACGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTAGGATTACAGGAAAGTACCATAATACACACACACACACGCACA  600

seq1  CGCACATACACACACACTCTTTTAAATGGAGCTGGGAACGGAACCCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACATACACACACACTCTTTTAAATGGAGCTGGGAACGGAACCCAGAG  650

seq1  CTCTAGGGATGGCTGGCAAGTGCTCTCCTCCTGAACACTTCAGCACATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGGATGGCTGGCAAGTGCTCTCCTCCTGAACACTTCAGCACATCT  700

seq1  CTGGCTCTCCTCAGCTGACTTTTGGAAAGAAAACAAGCTGTCACTGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTCCTCAGCTGACTTTTGGAAAGAAAACAAGCTGTCACTGGAAT  750

seq1  TACAAAGCTGCAGGGTAGTCTCCTGCCAGGGACCGGCGCCCTCAACCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCTGCAGGGTAGTCTCCTGCCAGGGACCGGCGCCCTCAACCTAG  800

seq1  GGCAAGCGCTCGCCACCTGACCCTTGACTGCTTCTCTTGTCTACAGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCGCTCGCCACCTGACCCTTGACTGCTTCTCTTGTCTACAGCACA  850

seq1  CGTGCTCAGCCACCTTACCCGTCACTCCCCTATCATAGTAAGCGAACCTC  900
      ||||||||||||||||||||||||||||||| || | |||||||||||||
seq2  CGTGCTCAGCCACCTTACCCGTCACTCCCCTTTCTTTGTAAGCGAACCTC  900

seq1  AAGGTCAGGTAATGAAGTACAGAACCCAAAGAAGAGATAATGCAAGACAT  950
      || |||||   ||||||||||||||||| ||||||||| |||||||||||
seq2  AA-GTCAG--TATGAAGTACAGAACCCATAGAAGAGAT-ATGCAAGACAT  946

seq1  GACGGCTTCCTTACAAATAGTAAAGTTATGGAAGTTAGCTTAAGAACAGC  1000
      |||||||||||| ||||||||||   ||||||||||||| ||||||||||
seq2  GACGGCTTCCTT-CAAATAGTAA--GTATGGAAGTTAGC-TAAGAACAGC  992

seq1  ACCTAACAGCTTTAAAGCCTTTTTTGTTATATTCAAATCAGTATTCCAAA  1050
      |||| |||||||| |||||||||||  ||||||| |||||| ||||||| 
seq2  ACCT-ACAGCTTT-AAGCCTTTTTTTGTATATTC-AATCAG-ATTCCAA-  1037

seq1  GGAAGCTAGGACTCAGATGAGGAGAGAGAGAGAAGCGGCTAGCCCGTACC  1100
       |||||||||||||||||||||| | | |||||| ||||  | |||||||
seq2  -GAAGCTAGGACTCAGATGAGGA-AAAAAGAGAA-CGGCCTG-CCGTACC  1083

seq1  CTGGAATACAGCCGCTTTCCCTGATGATTCTCCTTTCCACTGTAAACTCA  1150
      |||  ||||| ||||||| |||||||| ||||  || |||||||| |   
seq2  CTG--ATACA-CCGCTTT-CCTGATGA-TCTC--TTTCACTGTAATC---  1123

seq1  CCCTCTGGCCA  1161
      |||||||||||
seq2  CCCTCTGGCCA  1134

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BAC

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Alignment Information