BAC Information

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BAC

Clone NameB6Ng01-025N24
Chromosome3 (Build37)
Map Location 63,718,217 - 63,718,901
singlet/doubletsinglet
Overlap geneE130311K13Rik
Upstream geneLOC676984, LOC666967, Mme, Plch1, LOC100040836
Downstream geneSlc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025N24.bB6Ng01-025N24.g
ACCDH857087DH857088
length7011,048
definitionDH857087|Mus musculus domesticus DNA, BAC clone: B6Ng01-025N24, 5' end.DH857088|Mus musculus domesticus DNA, BAC clone: B6Ng01-025N24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtatgaaccaagggtggccttgaactccttatcttccagtccc
tacttaccaagtgctgggattacaggtgcatgctaccatgcccaactcca
aatttactatcaaggcagaatactctctcatgcaatgaggagttagaagg
cagggtagtttgagaattggcgagttcaggggctccgcgatgtcctaaag
atcgttcctttctgacatctgtgctgccgtcctcatctctgttttaaggg
aaatcctcttatctaactaccggatggaaataactgtatttattacgaga
aatggtggtcttacctcttggatcagtggtcctaactcagcagtggctag
aaagatgactggagaaaaagagtgatctcagaaaagaatgttttttttaa
attcctttattataaagttgataaaactgaaaaacaaaatgtcaaatatt
ggctgtcctagacactaatatacagtcgatactttaaacttcctctttca
gacattagcactatagggctggtaaatgtagctcagtattgatgtggctg
gctaggaccagatatcctgaaggccctgaagttcaatccctgggcaccta
ggtacaggggaggcagaaagaaccaggccaacattagtcttgcatatata
tcctcctttctatctgggtacttttaacaaggtgtgccactactttctaa
a
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcatggaaatgcaaatcaacacaaccgtgagat
tccatctcacaccggtcagaatggctaagatcaaaaattcaggtgacagc
agatgcctgtgaggatgtggagaaagaggaacactcctccattgttagtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaacattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaactcagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttgcacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcataggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaatc
ttagtatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaatgaagaccaacgtgtggacactttgccccttcttagaattggga
acagaacacccatggaaggagttacagagacaaagtttggagctttgacg
aaaggatggaacatctagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatacagctgtctcttgtgagactatgccgggccctagcaaa
cacagaagtggatgctcatagtcatctattggatagatcacagggctccc
aatggaaggaactagaaaatgtatccaatggagctaaagggatctgcacc
ctatagtgggtaccaatatgtcctacctgttgcctcagagtccttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63718217_63718901
seq2: B6Ng01-025N24.b_33_733

seq1  GAATTCTGTATGAACCAAGGGTGGCCTTGAACTCCTTATCTTCCAGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATGAACCAAGGGTGGCCTTGAACTCCTTATCTTCCAGTCCC  50

seq1  TACTTACCAAGTGCTGGGATTACAGGTGCATGCTACCATGCCCAACTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCAAGTGCTGGGATTACAGGTGCATGCTACCATGCCCAACTCCA  100

seq1  AATTTACTATCAAGGCAGAATACTCTCTCATGCAATGAGGAGTTAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTATCAAGGCAGAATACTCTCTCATGCAATGAGGAGTTAGAAGG  150

seq1  CAGGGTAGTTTGAGAATTGGCGAGTTCAGGGGCTCCGCGATGTCCTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTAGTTTGAGAATTGGCGAGTTCAGGGGCTCCGCGATGTCCTAAAG  200

seq1  ATCGTTCCTTTCTGACATCTGTGCTGCCGTCCTCATCTCTGTTTTAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTCCTTTCTGACATCTGTGCTGCCGTCCTCATCTCTGTTTTAAGGG  250

seq1  AAATCCTCTTATCTAACTACCGGATGGAAATAACTGTATTTATTACGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTCTTATCTAACTACCGGATGGAAATAACTGTATTTATTACGAGA  300

seq1  AATGGTGGTCTTACCTCTTGGATCAGTGGTCCTAACTCAGCAGTGGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGGTCTTACCTCTTGGATCAGTGGTCCTAACTCAGCAGTGGCTAG  350

seq1  AAAGATGACTGGAGAAAAAGAGTGATCTCAG-AAAGAATG-TTTTTTTAA  398
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  AAAGATGACTGGAGAAAAAGAGTGATCTCAGAAAAGAATGTTTTTTTTAA  400

seq1  ATTCCTTTATTATAAAGTTGATAAAACTGAAAAAC-AAATGTCAAATA-T  446
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  ATTCCTTTATTATAAAGTTGATAAAACTGAAAAACAAAATGTCAAATATT  450

seq1  GGCTGTCCTAGACAACTAATATAACAGTCGATAC-TTAAACTTCCTC-TT  494
      ||||||||||||| |||||||| ||||||||||| |||||||||||| ||
seq2  GGCTGTCCTAGAC-ACTAATAT-ACAGTCGATACTTTAAACTTCCTCTTT  498

seq1  CAGACATTAGCACTATAGGGCTGGT-AATGTAGCTCAGTAATGATGT-GC  542
      ||||||||||||||||||||||||| |||||||||||||| |||||| ||
seq2  CAGACATTAGCACTATAGGGCTGGTAAATGTAGCTCAGTATTGATGTGGC  548

seq1  T-GCTA-GACCAGAGTACCTG-AGGCCCTG-AGTTCAATCCCT-GGCACT  587
      | |||| |||||||   |||| |||||||| |||||||||||| ||||| 
seq2  TGGCTAGGACCAGATATCCTGAAGGCCCTGAAGTTCAATCCCTGGGCACC  598

seq1  AGGGTACA-GGGAGGCAG-AAGAACAAGGCAAAACATTAGTTCTGCATAT  635
        |||||| ||||||||| |||||| ||||  |||||||||  |||||||
seq2  TAGGTACAGGGGAGGCAGAAAGAACCAGGC-CAACATTAGTCTTGCATAT  647

seq1  ATA--CATCTTTCTA-CTGGGTAACTTTTTACA--GTGTGTCACTACTTT  680
      |||  |  ||||||| |||||| |||||| |||  ||||| |||||||||
seq2  ATATCCTCCTTTCTATCTGGGT-ACTTTTAACAAGGTGTGCCACTACTTT  696

seq1  CTAAA  685
      |||||
seq2  CTAAA  701