BAC Information

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BAC

Clone NameB6Ng01-025P22
Chromosome3 (Build37)
Map Location 41,059,220 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025P22.bB6Ng01-025P22.g
ACCDH857164DH857165
length953115
definitionDH857164|Mus musculus domesticus DNA, BAC clone: B6Ng01-025P22, 5' end.DH857165|Mus musculus domesticus DNA, BAC clone: B6Ng01-025P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaaaggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcagaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctcgataagtttcagtgtctctggttttatgtgtagttccttaa
tcaacttagatttgaccttagtacaaggagatagaaatgggtcaattcac
attcttctacatgataaccaccagttgtgtcagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gactataggtgtgtggattcatctctgggtcttcaattctgtttaattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtagtacagttttaggtccggcatggtgatttcaccagaggttcttt
tatccttgagaagagtatttgctatcctaggttttttgttattccagatg
aatctgctgattgcccttactaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctttagagacttgaagttcttatcata
cagatctttcacttccttagttaggagtcacgccaaggtattttatatta
ttt
aaaatactcaacaagctgaagtgcccaagtgtgaatgccttagtcccact
tgagagagaaaaaaaagcaaacataagtggggagagagggagggacttgg
gagggaaagtggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059220_41059737
seq2: B6Ng01-025P22.b_49_567 (reverse)

seq1  GAATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCA  50
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  GAATCCACACACCTATAGTCACTTGATCTTTGACAAGGGAGCTAAAACCA  50

seq1  TCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGG  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGACACAACTGG  100

seq1  TTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTAC  150
      | ||||||||||||||||||| ||||||| ||| | ||||||||||||||
seq2  TGGTTATCATGTAGAAGAATGTGAATTGACCCATTTCTATCTCCTTGTAC  150

seq1  TAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACAC  200
      ||||||||||||||||| ||| |||||||  |||||||||||||||||||
seq2  TAAGGTCAAATCTAAGTTGATTAAGGAACTACACATAAAACCAGAGACAC  200

seq1  TGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACA  250
      |||||||||| ||||||||||| ||||||||||| ||||||||||  |||
seq2  TGAAACTTATCGAGGAGAAAGTAGGGAAAAGCCTCGAAGATATGGGTACA  250

seq1  GGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAG  300
      ||||||||||||||| |||||||||||||||||| |||||||||||  ||
seq2  GGGGAAAAATTCCTGAATAGAACAGCAATGGCTTCTGCTGTAAGATCAAG  300

seq1  AATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAG  350
      ||| || |||||||||||||| ||| |||||||||||||||| |||||||
seq2  AATCGATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAAGCAAAAG  350

seq1  ACACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTT  399
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACCGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTT  400

seq1  ACCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACT  449
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  ACCTATCCCAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACT  450

seq1  CAAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCT  499
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  CAAGAAGGTGGACTCCAGAAAATCAAATAACCCCTTTAAAAAATGGGGCT  500

seq1  CAGAGCTAAACAAAGAATT  518
      ||||||| |||||||||||
seq2  CAGAGCTGAACAAAGAATT  519