BAC Information

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BAC

Clone NameB6Ng01-026D05
Chromosome3 (Build37)
Map Location 13,788,288 - 13,789,399
singlet/doubletsinglet
Overlap gene0710005M24Rik
Upstream geneEG668033, LOC668037, LOC100039823, LOC100039861, LOC100041679, LOC100041667, LOC100039882
Downstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026D05.bB6Ng01-026D05.g
ACCDH857313DH857314
length1,0951,074
definitionDH857313|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D05, 5' end.DH857314|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagcatctgaaacactcaattaatctcagctacatactgagat
tctatgctaccttaacaggttttttaaaccctatgaactttgacatatat
cttctatgtactagaacatttatttattctttacttgcaccatcctccct
atttgaggaagtgttattctctagcatatgcattcaggcacaagttagat
agagagtttgaacatctagtaagaatagattgacagaaggtctagggcaa
aatgacaagttcagataatcacttttggcaatatatttattctattgcca
atccctgaagaacatcataaacctcacgggaacttctcagtcagaaaact
tgtagaaaagatctaaagaatgctgctggttttaaagagcagttttagca
ggacatgattatataactctattaccatttgaactgatgaaaagcaatgc
aaagatgttagcttttatttcatgtttaagagtctattatcagcatgctt
gcttgcggtgataggctagcaagttcagattctcaagatataaatgaaaa
cttcatccttcagctactttgagcactgctggcaatagacacataaacat
tttaactagtaaatctctaaatgtgccctggtctttgaatctatcaataa
atcattctagacatttctgtccctgaaaaattgtcttatgaagtcctgta
tttgtgattttctaacatatgttacatttattatattatactatgttatg
ttagttatattatattacattatatgatatgatatgatattatatagaca
tcctaagggattacaaatttcaggatgccatactgaaattataatagtga
cttttgcttttggaaaaaaaatctatacacacaatgtggaagggcttgaa
tagcacagaagaattataagaaattcatcattggagagtcttcagactct
ccattcttttctgtggcttgtataaatatcacaattccatgtagtagctt
gtatacatttattataagtaaattttctcatgcattttctcaatatttta
gatatccctgcacatcaaaaaaagtattttctgtcttaccttatt
gaattccagtctccagtttctggctatccaagcaaaggtggcatgggctc
cgtcttgtggagtgagaatcagggtaaggcagacattaattagaactgcc
cacatgccccatgcagcaattacaacagcatattttccatgcaagactaa
aaataagtggtagatttttaagtaagttggaatcaaggtttctctttcca
tatcctatagattaaatcattactccatagatactagaatatagaaatga
cacaaaacttgaccagtttgtagtcaattagctgactggaagtctagatt
gtttaagaatttccttgaccctccagaaattcaaataaccccattaaaaa
tggggtacagagctaaacaaaaaattctcaagtgaggaataccaaagggc
tgagaagcacctgaaaaaatgttcagcatccttactcatcagagaaatgc
aaatcaaaacaaccctgagattccacctcactccagtcagaatggctaag
atctaaacttcaggtgacagcagatgctggcaaggatgtggagaaagagg
aatactcctccattgcccatgggattgtaatcttgtacaaccactctgga
aatcagtctggcagttcctcagaaaattggacatagtactaccggaagat
cccgcaaaacctctcctagacatatatccagaagatgttccaactggtaa
taaggacacatgctccactatcttcatagcagccttatttataaaagcca
gaagctggaaagaacccagatttccctcaacagaggaatagatacagaaa
atgtggtatatttacacaatggagtattattcagctattaaaacaatgaa
tttatgaaattcttgggcaatggatgtgtctggaggatatcatccttagt
gagtaacccaatcaccaaagaggtcatttgtatgcactcactgatagacc
tcagaaacttagagtatcaaagatacatttgcaaacacagaaatcatgag
acgagaccaagtgtgaatctacttcctcttagaaagggacaaacactcat
ggaggagttaaagacaaagtctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13788288_13789399
seq2: B6Ng01-026D05.b_44_1138

seq1  GAATTCTCAGCATCTGAAACACTCAATTAATCTCAGCTACATACTGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCATCTGAAACACTCAATTAATCTCAGCTACATACTGAGAT  50

seq1  TCTATGCTACCTTAACAGGTTTTTTAAACCCTATGAACTTTGACATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTACCTTAACAGGTTTTTTAAACCCTATGAACTTTGACATATAT  100

seq1  CTTCTATGTACTAGAACATTTATTTATTCTTTACTTGCACCATCCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATGTACTAGAACATTTATTTATTCTTTACTTGCACCATCCTCCCT  150

seq1  ATTTGAGGAAGTGTTATTCTCTAGCATATGCATTCAGGCACAAGTTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGGAAGTGTTATTCTCTAGCATATGCATTCAGGCACAAGTTAGAT  200

seq1  AGAGAGTTTGAACATCTAGTAAGAATAGATTGACAGAAGGTCTAGGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTTGAACATCTAGTAAGAATAGATTGACAGAAGGTCTAGGGCAA  250

seq1  AATGACAAGTTCAGATAATCACTTTTGGCAATATATTTATTCTATTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAGTTCAGATAATCACTTTTGGCAATATATTTATTCTATTGCCA  300

seq1  ATCCCTGAAGAACATCATAAACCTCACGGGAACTTCTCAGTCAGAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGAAGAACATCATAAACCTCACGGGAACTTCTCAGTCAGAAAACT  350

seq1  TGTAGAAAAGATCTAAAGAATGCTGCTGGTTTTAAAGAGCAGTTTTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAAAGATCTAAAGAATGCTGCTGGTTTTAAAGAGCAGTTTTAGCA  400

seq1  GGACATGATTATATAACTCTATTACCATTTGAACTGATGAAAAGCAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGATTATATAACTCTATTACCATTTGAACTGATGAAAAGCAATGC  450

seq1  AAAGATGTTAGCTTTTATTTCATGTTTAAGAGTCTATTATCAGCATGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTTAGCTTTTATTTCATGTTTAAGAGTCTATTATCAGCATGCTT  500

seq1  GCTTGCGGTGATAGGCTAGCAAGTTCAGATTCTCAAGATATAAATGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCGGTGATAGGCTAGCAAGTTCAGATTCTCAAGATATAAATGAAAA  550

seq1  CTTCATCCTTCAGCTACTTTGAGCACTGCTGGCAATAGACACATAAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCTTCAGCTACTTTGAGCACTGCTGGCAATAGACACATAAACAT  600

seq1  TTTAACTAGTAAATCTCTAAATGTGCCCTGGTCTTTGAATCTATCAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTAGTAAATCTCTAAATGTGCCCTGGTCTTTGAATCTATCAATAA  650

seq1  ATCATTCTAGACATTTCTGTCCCTGAAAAATTGTCTTATGAAGTCCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTAGACATTTCTGTCCCTGAAAAATTGTCTTATGAAGTCCTGTA  700

seq1  TTTGTGATTTTCTAACATATGTTACATTTATTATATTATACTATGTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATTTTCTAACATATGTTACATTTATTATATTATACTATGTTATG  750

seq1  TTAGTTATATTATATTACATTATATGATATGATATGATATTATATAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTATATTATATTACATTATATGATATGATATGATATTATATAGACA  800

seq1  TCCTAAGGGATTACAAATTTCAGGATGCCATACTGAAATTATAATAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGGGATTACAAATTTCAGGATGCCATACTGAAATTATAATAGTGA  850

seq1  CTTTTGCTTTTGGAAAAAAAATCTATACACACAATGTGGAAGGGCTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTTTTGGAAAAAAAATCTATACACACAATGTGGAAGGGCTTGAA  900

seq1  TAGCACAGAAGGAATTATAAGAAATTCATCATTGGAGAGTCTTCAGGACT  950
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  TAGCACAGAA-GAATTATAAGAAATTCATCATTGGAGAGTCTTCA-GACT  948

seq1  CTCCATTCTTTTCTGTGGCTTGTATAAAATATCACAATTCCATGTTAGTA  1000
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  CTCCATTCTTTTCTGTGGCTTGTAT-AAATATCACAATTCCATG-TAGTA  996

seq1  GCTTGTAATAACATTTTATTTATAAGTAAATTTTCCTCATGCATTTTCTC  1050
      |||||||   ||||||   ||||||||||||||| |||||||||||||||
seq2  GCTTGTA--TACATTT--ATTATAAGTAAATTTT-CTCATGCATTTTCTC  1041

seq1  AAATATTTTAAGATATTCCCTTGCACATTAAAAAAAAAAGTATTTTCCTG  1100
       |||||||| ||||||  || |||||||    |||||||||||||| |||
seq2  -AATATTTT-AGATAT--CCCTGCACAT---CAAAAAAAGTATTTT-CTG  1083

seq1  TCTTACCTTATT  1112
      ||||||||||||
seq2  TCTTACCTTATT  1095