BAC Information

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BAC

Clone NameB6Ng01-026D15
Chromosome3 (Build37)
Map Location 140,880,365 - 141,055,676
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC621343, 4930590L14Rik, Pdha2
Downstream geneUnc5c, LOC100039923, Bmpr1b, Gabarapl2-ps3, Pdlim5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026D15.bB6Ng01-026D15.g
ACCDH857333DH857334
length4401,009
definitionDH857333|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D15, 5' end.DH857334|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,055,237 - 141,055,676)(140,880,365 - 140,881,382)
sequence
gaattctccttataattgcaatgataccacctgaatgtgcctgtgcacac
agtgatggcaaagctcattatttctgacagtatctctcacttctagcaaa
gtatcggccacatggagcttggaagatgagatgtctctttccataatatc
ctgccccttcttaacgcgctctacatagggcttctttctgatccttacat
tcctgagttctctactgctgtatcatttcccattacccttctctttgttg
ggatgctaactcaacaccttccaagattcctctgtctcttgggtgcatct
taataatgcacctcaccctcagatacagataacttacttcaagatggagt
tctgtttcacatgcagattctgtgtgtaattttcaggacaaagcaaaggc
tttgtttggtaagttctttgtgtgtgtgtgtgtgtgtgtg
gaattcattcttactgattcacagaaaacccccattgatatgtacagaca
tactaaatatatttattgctactgtttttcaacgcggaatataaacgttt
gtgctattatatagatgaatttgaagttgaaggtacagtggtaaatgctg
tctagccatgaagcttatatctatttgcaagagaaacagataagtctcat
ttgcttttttgtttctctgagttcagaaagccaatttgacttgtttctga
ttcccatgttgggaaactgaggactatgtagattagatgagaggaggaaa
ttacaaacatagttgaagaaagtaaagtgtctattcttattccatcttct
agaaatgctgtcttctatgcaccctcttcttgctaagcaatagacgtgca
atggggacacgtaggacttttccttattttagctcatatgaccttgttgt
gctacaatctctcccagcttctccggcatggtttagaaaaaaagagattc
atcatcattgaatgacacacgaacagctgttacagaggccatgaaatgaa
agtgccacgttccaggtaatagttagaacgacagtttgtctttattagaa
tcaatgatgaacaaattaaaaatagagcagtgtcaaacagcaacacacaa
actaaaacacttactttgaaaagttgcattgtctccttcaatttggtaat
acagctgagttgaaaagcaccctgggaaataggaaaatccggatctcata
actatgcaatctattatgaatatgaatgcagtatctccaagcaacctgag
tgagacaatgcagcaatatacgttttatggagccaagtgagaattgttcc
gttcctatggacccactgtatatctgggctctaagatggtgaatgtatct
ggcactgagacctaaaggacagaagggggagtgtcagagacagttttact
agaagcacagaagatatcacccacatggtaatgtggaatgtactggggga
tgggggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141055237_141055676
seq2: B6Ng01-026D15.b_45_484 (reverse)

seq1  CACACACACACACACACACACAAAGAACTTACCAAACAAAGCCTTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACAAAGAACTTACCAAACAAAGCCTTTGCTT  50

seq1  TGTCCTGAAAATTACACACAGAATCTGCATGTGAAACAGAACTCCATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGAAAATTACACACAGAATCTGCATGTGAAACAGAACTCCATCTT  100

seq1  GAAGTAAGTTATCTGTATCTGAGGGTGAGGTGCATTATTAAGATGCACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAGTTATCTGTATCTGAGGGTGAGGTGCATTATTAAGATGCACCC  150

seq1  AAGAGACAGAGGAATCTTGGAAGGTGTTGAGTTAGCATCCCAACAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACAGAGGAATCTTGGAAGGTGTTGAGTTAGCATCCCAACAAAGAG  200

seq1  AAGGGTAATGGGAAATGATACAGCAGTAGAGAACTCAGGAATGTAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTAATGGGAAATGATACAGCAGTAGAGAACTCAGGAATGTAAGGAT  250

seq1  CAGAAAGAAGCCCTATGTAGAGCGCGTTAAGAAGGGGCAGGATATTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAGCCCTATGTAGAGCGCGTTAAGAAGGGGCAGGATATTATGG  300

seq1  AAAGAGACATCTCATCTTCCAAGCTCCATGTGGCCGATACTTTGCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACATCTCATCTTCCAAGCTCCATGTGGCCGATACTTTGCTAGAA  350

seq1  GTGAGAGATACTGTCAGAAATAATGAGCTTTGCCATCACTGTGTGCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGATACTGTCAGAAATAATGAGCTTTGCCATCACTGTGTGCACAG  400

seq1  GCACATTCAGGTGGTATCATTGCAATTATAAGGAGAATTC  440
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTCAGGTGGTATCATTGCAATTATAAGGAGAATTC  440

seq1: chr3_140880365_140881382
seq2: B6Ng01-026D15.g_68_1075

seq1  GAATTCATTCTTACTGATTCACAGAAAACCCCCATTGATATGTACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTACTGATTCACAGAAAACCCCCATTGATATGTACAGACA  50

seq1  TACTAAATATATTTATTGCTACTGTTTTTCAACGCGGAATATAAACGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATATATTTATTGCTACTGTTTTTCAACGCGGAATATAAACGTTT  100

seq1  GTGCTATTATATAGATGAATTTGAAGTTGAAGGTACAGTGGTAAATGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATTATATAGATGAATTTGAAGTTGAAGGTACAGTGGTAAATGCTG  150

seq1  TCTAGCCATGAAGCTTATATCTATTTGCAAGAGAAACAGATAAGTCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCATGAAGCTTATATCTATTTGCAAGAGAAACAGATAAGTCTCAT  200

seq1  TTGCTTTTTTGTTTCTCTGAGTTCAGAAAGCCAATTTGACTTGTTTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTTGTTTCTCTGAGTTCAGAAAGCCAATTTGACTTGTTTCTGA  250

seq1  TTCCCATGTTGGGAAACTGAGGACTATGTAGATTAGATGAGAGGAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGTTGGGAAACTGAGGACTATGTAGATTAGATGAGAGGAGGAAA  300

seq1  TTACAAACATAGTTGAAGAAAGTAAAGTGTCTATTCTTATTCCATCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACATAGTTGAAGAAAGTAAAGTGTCTATTCTTATTCCATCTTCT  350

seq1  AGAAATGCTGTCTTCTATGCACCCTCTTCTTGCTAAGCAATAGACGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTGTCTTCTATGCACCCTCTTCTTGCTAAGCAATAGACGTGCA  400

seq1  ATGGGGACACGTAGGACTTTTCCTTATTTTAGCTCATATGACCTTGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGACACGTAGGACTTTTCCTTATTTTAGCTCATATGACCTTGTTGT  450

seq1  GCTACAATCTCTCCCAGCTTCTCCGGCATGGTTTAGAAAAAAAGAGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAATCTCTCCCAGCTTCTCCGGCATGGTTTAGAAAAAAAGAGATTC  500

seq1  ATCATCATTGAATGACACACGAACAGCTGTTACAGAGGCCATGAAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATTGAATGACACACGAACAGCTGTTACAGAGGCCATGAAATGAA  550

seq1  AGTGCCACGTTCCAGGTAATAGTTAGAACGACAGTTTGTCTTTATTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACGTTCCAGGTAATAGTTAGAACGACAGTTTGTCTTTATTAGAA  600

seq1  TCAATGATGAACAAATTAAAAATAGAGCAGTGTCAAACAGCAACACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGATGAACAAATTAAAAATAGAGCAGTGTCAAACAGCAACACACAA  650

seq1  ACTAAAACACTTACTTTGAAAAGTTGCATTGTCTCCTTCAATTTGGTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACACTTACTTTGAAAAGTTGCATTGTCTCCTTCAATTTGGTAAT  700

seq1  ACAGCTGAGTTGAAAAGCACCCTGGGAAATAGGAAAATCCGGATCTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGAGTTGAAAAGCACCCTGGGAAATAGGAAAATCCGGATCTCATA  750

seq1  ACTATGCAATCTATTATGAATATGAATGCAGTATCTCCAAGCAACCTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCAATCTATTATGAATATGAATGCAGTATCTCCAAGCAACCTGAG  800

seq1  TGAGACAATGCAGGCAATATACGTTTTATGGAGCCAAGTGAGAATTGTTC  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGAGACAATGCA-GCAATATACGTTTTATGGAGCCAAGTGAGAATTGTTC  849

seq1  CGTTCCTATGGACCCACTGTATATCTGGGCTCTAAGATGGTTGAAATGTA  900
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  CGTTCCTATGGACCCACTGTATATCTGGGCTCTAAGATGGT--GAATGTA  897

seq1  TCTGGCACTGAGAACCTAAAAGGACAGAAAGGGGGAGTGTCAGAGACAGT  950
      |||||||||||| |||| ||||||||| ||||||||||||||||||||||
seq2  TCTGGCACTGAG-ACCT-AAAGGACAG-AAGGGGGAGTGTCAGAGACAGT  944

seq1  TTTAACTTAGAAGCACAGAAGATATCACCCACATTGGTAATGTGAGAATG  1000
      ||||   |||||||||||||||||||||||||| |||||||||| |||||
seq2  TTTA--CTAGAAGCACAGAAGATATCACCCACA-TGGTAATGTG-GAATG  990

seq1  TACTGGGGGATGGGGGGG  1018
      ||||||||||||||||||
seq2  TACTGGGGGATGGGGGGG  1008