BAC Information

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BAC

Clone NameB6Ng01-026F11
Chromosome3 (Build37)
Map Location 57,432,700 - 57,484,285
singlet/doubletdoublet
Overlap geneCommd2, Gm410
Upstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1
Downstream geneEG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik, Tsc22d2, D3Ucla1, Eif2a, 2810407C02Rik, 4932431H17Rik, LOC666680, LOC100040251, Siah2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026F11.bB6Ng01-026F11.g
ACCDH857413DH857414
length1,086269
definitionDH857413|Mus musculus domesticus DNA, BAC clone: B6Ng01-026F11, 5' end.DH857414|Mus musculus domesticus DNA, BAC clone: B6Ng01-026F11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,432,700 - 57,433,800)(57,484,017 - 57,484,285)
sequence
gaattctttgtatgttctgtttatttttttatttttttgtcaaacatgtg
actcacaaatgtgtgatgactaaagaaactttttattctaggcatctatg
ttggagtcagagacaaacacctactagctgtgcctggaagataagttaac
ctttactcagtgaccttcatccagacatgtacacctgggaccatctactt
cttatgatatgactaactgcatttttggcttctgtaacctgcttatgcag
acattcaaggactattgtgaggtagcctgactatctaatcttggcagagc
agaatagctcctggattgcttgtgtagatactcaaggtattcttgtgagt
ttccccttaaaaatcctcccctcaccccttttggcatggcaatttcaagt
ttgtctcagagattgttgtcctgctagcagtaatgaataaatctctaaat
tattattatttttgagacagggtctaacagccctgtctaacagccctggc
tgtcctgggactcacagagatctgcctgcctctgccttctgagtgactgg
attaaaggtttgtgccaccaggcctggttaaattttcattataatttgat
tgagtctttccccagggatcaggaacaccataacaaatacagcctgccat
tctgtgttgcctttgtatactgctgatattgtctttaaaatttaattttt
agattttttaaaattttatgcgtatgtgttttctacctgcatgtatatat
gagtctgaagagattaggagaagggggtgttagttcccttaaaaggggag
ttacagatggttgtgagcagcatgtgggttctaggaactgaactgaaacc
ctctgaaagagaagttctcatacactgagctatctctccagcctctccac
ttaattatttcttctttatttcctaagagtgctttgcagttgtcatcata
cagattgtttcatttctacgcatattattcttctgccatagactacacac
cgctttcttcaggttgatcatttctgtgctgcgataaacattgacaacag
catttcaggaggaggattatttcttttggcttacag
agacccacatccatttgtgttgtctgtttttaataaaatattttccacct
cattgctaatgtacacatactatttttagtgtgtttgcatctactttttg
aagacaaaaaggaaatatgatcttgaaatagaatacatttgtttggactg
aagagttgaacctttgagtttgtttgtggtttttgtttccaaagggaaaa
atctaatctttttgttggtgttttgttgttagtgattgttggtcagtggg
tgtggggacagagggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57432700_57433800
seq2: B6Ng01-026F11.b_44_1129

seq1  GAATTCTTTGTATGTTCTGTTTATTTTTTTATTTTTTTGTCAAACATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATGTTCTGTTTATTTTTTTATTTTTTTGTCAAACATGTG  50

seq1  ACTCACAAATGTGTGATGACTAAAGAAACTTTTTATTCTAGGCATCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAATGTGTGATGACTAAAGAAACTTTTTATTCTAGGCATCTATG  100

seq1  TTGGAGTCAGAGACAAACACCTACTAGCTGTGCCTGGAAGATAAGTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTCAGAGACAAACACCTACTAGCTGTGCCTGGAAGATAAGTTAAC  150

seq1  CTTTACTCAGTGACCTTCATCCAGACATGTACACCTGGGACCATCTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCAGTGACCTTCATCCAGACATGTACACCTGGGACCATCTACTT  200

seq1  CTTATGATATGACTAACTGCATTTTTGGCTTCTGTAACCTGCTTATGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGATATGACTAACTGCATTTTTGGCTTCTGTAACCTGCTTATGCAG  250

seq1  ACATTCAAGGACTATTGTGAGGTAGCCTGACTATCTAATCTTGGCAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAAGGACTATTGTGAGGTAGCCTGACTATCTAATCTTGGCAGAGC  300

seq1  AGAATAGCTCCTGGATTGCTTGTGTAGATACTCAAGGTATTCTTGTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCTCCTGGATTGCTTGTGTAGATACTCAAGGTATTCTTGTGAGT  350

seq1  TTCCCCTTAAAAATCCTCCCCTCACCCCTTTTGGCATGGCAATTTCAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTAAAAATCCTCCCCTCACCCCTTTTGGCATGGCAATTTCAAGT  400

seq1  TTGTCTCAGAGATTGTTGTCCTGCTAGCAGTAATGAATAAATCTCTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCAGAGATTGTTGTCCTGCTAGCAGTAATGAATAAATCTCTAAAT  450

seq1  TATTATTATTTTTGAGACAGGGTCTAACAGCCCTGTCTAACAGCCCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTTTTGAGACAGGGTCTAACAGCCCTGTCTAACAGCCCTGGC  500

seq1  TGTCCTGGGACTCACAGAGATCTGCCTGCCTCTGCCTTCTGAGTGACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGGACTCACAGAGATCTGCCTGCCTCTGCCTTCTGAGTGACTGG  550

seq1  ATTAAAGGTTTGTGCCACCAGGCCTGGTTAAATTTTCATTATAATTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTTTGTGCCACCAGGCCTGGTTAAATTTTCATTATAATTTGAT  600

seq1  TGAGTCTTTCCCCAGGGATCAGGAACACCATAACAAATACAGCCTGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTTCCCCAGGGATCAGGAACACCATAACAAATACAGCCTGCCAT  650

seq1  TCTGTGTTGCCTTTGTATACTGCTGATATTGTCTTTAAAATTTAATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTGCCTTTGTATACTGCTGATATTGTCTTTAAAATTTAATTTTT  700

seq1  AGATTTTTTAAAATTTTATGCGTATGTGTTTTCTACCTGCATGTATATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTAAAATTTTATGCGTATGTGTTTTCTACCTGCATGTATATAT  750

seq1  GAGTCTGAAGAGATTAGGAGAAGGGGGTGTTAGTTCCCTTAAAAGGGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGAAGAGATTAGGAGAAGGGGGTGTTAGTTCCCTTAAAAGGGGAG  800

seq1  TTACAGATGGTTGTGAGCAGCATGTGGGTTCTAGGAACTGAACTGAAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATGGTTGTGAGCAGCATGTGGGTTCTAGGAACTGAACTGAAACC  850

seq1  CTCTGAAAGAGAAAGTTCTCATACACTGAGCTATCTCTCCAGCCTCTCCA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAGAG-AAGTTCTCATACACTGAGCTATCTCTCCAGCCTCTCCA  899

seq1  CTTAATTATTTCTTCTTTAATTTTCCTAAGAAGTGCTTTGCAGTTGTCAT  950
      |||||||||||||||||||  ||||||||| |||||||||||||||||||
seq2  CTTAATTATTTCTTCTTTA--TTTCCTAAG-AGTGCTTTGCAGTTGTCAT  946

seq1  CATACAGATTGTTTCATTTCCTACGCATATTATTCTTCTTGCCATAGAAC  1000
      ||||||||||||||||||| |||||||||||||||||| |||||||| ||
seq2  CATACAGATTGTTTCATTT-CTACGCATATTATTCTTC-TGCCATAG-AC  993

seq1  TAACAACACCGCTTTCTTTCAAGGTTGATCATTTCTGTTGCTGCGATAAA  1050
      ||   |||||||||||||   |||||||||||||||| ||||||||||||
seq2  TA--CACACCGCTTTCTT--CAGGTTGATCATTTCTG-TGCTGCGATAAA  1038

seq1  CATTGACCAACAGCAATTTCAGGAGGAGGATTTATTTCTTTTGGCTTACA  1100
      |||||| ||||||| ||||||||||||||| |||||||||||||||||||
seq2  CATTGA-CAACAGC-ATTTCAGGAGGAGGA-TTATTTCTTTTGGCTTACA  1085

seq1  G  1101
      |
seq2  G  1086

seq1: chr3_57484017_57484285
seq2: B6Ng01-026F11.g_73_341 (reverse)

seq1  CACTCCCTCTGTCCCCACACCCACTGACCAACAATCACTAACAACAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTCTGTCCCCACACCCACTGACCAACAATCACTAACAACAAAAC  50

seq1  ACCAACAAAAAGATTAGATTTTTCCCTTTGGAAACAAAAACCACAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAAAAAGATTAGATTTTTCCCTTTGGAAACAAAAACCACAAACAA  100

seq1  ACTCAAAGGTTCAACTCTTCAGTCCAAACAAATGTATTCTATTTCAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGGTTCAACTCTTCAGTCCAAACAAATGTATTCTATTTCAAGAT  150

seq1  CATATTTCCTTTTTGTCTTCAAAAAGTAGATGCAAACACACTAAAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCCTTTTTGTCTTCAAAAAGTAGATGCAAACACACTAAAAATAG  200

seq1  TATGTGTACATTAGCAATGAGGTGGAAAATATTTTATTAAAAACAGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTACATTAGCAATGAGGTGGAAAATATTTTATTAAAAACAGACAA  250

seq1  CACAAATGGATGTGGGTCT  269
      |||||||||||||||||||
seq2  CACAAATGGATGTGGGTCT  269