BAC Information

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BAC

Clone NameB6Ng01-026I23
Chromosome3 (Build37)
Map Location 21,526,841 - 21,528,023
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665094, LOC100040325
Downstream gene7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506, LOC675593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026I23.bB6Ng01-026I23.g
ACCDH857570DH857571
length1,170977
definitionDH857570|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I23, 5' end.DH857571|Mus musculus domesticus DNA, BAC clone: B6Ng01-026I23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagtaattgtgagaaaattcctacaaaacaagactctcgtgac
atcaatttcttcaaaacatggaattgctcttgggatatgttgttgtattt
ttcccaggtgtaacagataggagtaaatttacctcagattatttgtatat
tgttatttgtttatatgcctcaatggaaaaccatgttttgccacatgtga
cttttctgccatgtgcaatttgtcctggtgattgtacactttactcagat
gacccttctgaaccctcagagtataaactgtctgatgctctgaataaagt
ggactattgcatgagatgatagttcacctcattcattggctccattctcc
cagatcctacttcatgagtggtaaacagctgagtgttttacctcctgatc
ctcaggcagcaggcaaagagagagagacagagacagagaaagacagagac
agagagacagagacatagaaaccgaggcagaaatgaggacaaagacaaag
acagaaacctcaatactcaaatccagtgaaacacctcctccaacaagacc
atacgttttaatccttctcaaatacttccaccaactatttgagaccacat
gttcaaacataagtacctgtaaggaccaatctcattcaaaccaccacaca
aggcaagcagcttacagacagctattcctatagccctgtgaagggtgctc
ttttatgtgacattattccattgtgtcaaattatggaaatagcaaaagtt
agttatttaaataagcatgtattaggaggttactactaaaaggcactgtt
tcgcttcctaagaactagggcagctgtctgtaggaatctcgaagcccgga
ggggagcccagagacacccacatgcacaatcagaaaacaaacctttgttc
acagcctcctgaaatcacaagagactcatatgcctgatacttaggtccta
cattttatgatgaagctcattttcccctcatgtgtaaatggatagcatat
cccagtatttggcttctgtttataaaaaaagggtcaaactggtttttaag
cttccttttttttttttcttctcccctctcccacactccacattctgggc
ctgggcatccctgtacttaaggcgaaaaaagtttgtacgacaatggcttc
tttcatgatggccactaggc

gaattctttgtttagctctgagctccattttttaatggggttatttgatt
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgagaatctttttcaaaaggggaaacaaagtaggtaacagaaat
caatggaataagagaactgggtggaagaggggatcttaagcagagaaggg
caggggtagggctggaaatcatatgtagtgagaacagaggagaaacgagg
gagatcatagggcgggggcaggctgtgcaatctctaggacttgccagaga
cctgggatagggagaggtcccagacagtctatggaggctactacagctga
gattcttagcagtggggaagatagatcctgaaatggccacttcctgtagc
taagcaggacaaccagtggaaggataagggcggcaaccacccacaaagcc
tttgacccaaaatgtgtcctgcctagaggatgtgcaaggacaaagacaga
gtagaaactgagggaatggccagtcaatgactgccgtaaattgaaaccca
tcccatgggcaagaatcaatccatgacacttttactgatactttttcgtg
cttgcagacaggaacatgttgggagaaagattgaaggacctgaagaggtc
tgggagtccacaggaagagtcaactcacctggactgttgggggctcccag
agaatgggctggacctaggccccatgcacatatgaaagcagataaacagc
ttggtcttcatatgggtccccaaacaattggagcaggggttgtccctgaa
cctgtttcctgccttcctctgtatcccatgcccctaggtggacagccttg
tctggcctcattggagaggatgtgcctagtccttctgggacttgatacag
ggggggagacaggctgacacccaaaaagggtttattctttacaaaaaaga
tgggaaggtaaatgggagaggactcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_21526841_21528023
seq2: B6Ng01-026I23.b_47_1216

seq1  GAATTCTAAGTAATTGTGAGAAAATTCCTACAAAACAAGACTCTCGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTAATTGTGAGAAAATTCCTACAAAACAAGACTCTCGTGAC  50

seq1  ATCAATTTCTTCAAAACATGGAATTGCTCTTGGGATATGTTGTTGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTCTTCAAAACATGGAATTGCTCTTGGGATATGTTGTTGTATTT  100

seq1  TTCCCAGGTGTAACAGATAGGAGTAAATTTACCTCAGATTATTTGTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGTGTAACAGATAGGAGTAAATTTACCTCAGATTATTTGTATAT  150

seq1  TGTTATTTGTTTATATGCCTCAATGGAAAACCATGTTTTGCCACATGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTGTTTATATGCCTCAATGGAAAACCATGTTTTGCCACATGTGA  200

seq1  CTTTTCTGCCATGTGCAATTTGTCCTGGTGATTGTACACTTTACTCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGCCATGTGCAATTTGTCCTGGTGATTGTACACTTTACTCAGAT  250

seq1  GACCCTTCTGAACCCTCAGAGTATAAACTGTCTGATGCTCTGAATAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTCTGAACCCTCAGAGTATAAACTGTCTGATGCTCTGAATAAAGT  300

seq1  GGACTATTGCATGAGATGATAGTTCACCTCATTCATTGGCTCCATTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTATTGCATGAGATGATAGTTCACCTCATTCATTGGCTCCATTCTCC  350

seq1  CAGATCCTACTTCATGAGTGGTAAACAGCTGAGTGTTTTACCTCCTGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTACTTCATGAGTGGTAAACAGCTGAGTGTTTTACCTCCTGATC  400

seq1  CTCAGGCAGCAGGCAAAGAGAGAGAGACAGAGACAGAGAAAGACAGAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCAGCAGGCAAAGAGAGAGAGACAGAGACAGAGAAAGACAGAGAC  450

seq1  AGAGAGACAGAGACATAGAAACCGAGGCAGAAATGAGGACAAAGACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGAGACATAGAAACCGAGGCAGAAATGAGGACAAAGACAAAG  500

seq1  ACAGAAACCTCAATACTCAAATCCAGTGAAACACCTCCTCCAACAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACCTCAATACTCAAATCCAGTGAAACACCTCCTCCAACAAGACC  550

seq1  ATACGTTTTAATCCTTCTCAAATACTTCCACCAACTATTTGAGACCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTTTTAATCCTTCTCAAATACTTCCACCAACTATTTGAGACCACAT  600

seq1  GTTCAAACATAAGTACCTGTAAGGACCAATCTCATTCAAACCACCACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAACATAAGTACCTGTAAGGACCAATCTCATTCAAACCACCACACA  650

seq1  AGGCAAGCAGCTTACAGACAGCTATTCCTATAGCCCTGTGAAGGGTGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGCAGCTTACAGACAGCTATTCCTATAGCCCTGTGAAGGGTGCTC  700

seq1  TTTTATGTGACATTATTCCATTGTGTCAAATTATGGAAATAGCAAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTGACATTATTCCATTGTGTCAAATTATGGAAATAGCAAAAGTT  750

seq1  AGTTATTTAAATAAGCATGTATTAGGAGGTTACTACTAAAAGGCACTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTAAATAAGCATGTATTAGGAGGTTACTACTAAAAGGCACTGTT  800

seq1  TCGCTTCCTAAGAACTAGGGCAGCTGTCTGTAGGAATCTCGAAGCCCGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTCCTAAGAACTAGGGCAGCTGTCTGTAGGAATCTCGAAGCCCGGA  850

seq1  GGGGAGCCCAGAGACACCCACATGCACAATCAGAAAACAAACCTTTGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCCCAGAGACACCCACATGCACAATCAGAAAACAAACCTTTGTTC  900

seq1  ACAGCCTCCTGAAATCACAAGAGACTCATATGCCTGATACTTAGGTCCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTCCTGAAATCACAAGAGACTCATATGCCTGATACTTAGGTCCTA  950

seq1  CATTTTATGATGAAGCTCATTTTCCACTCATGTGTATATGGTATAGCATA  1000
      ||||||||||||||||||||||||| |||||||||| |||| ||||||||
seq2  CATTTTATGATGAAGCTCATTTTCCCCTCATGTGTAAATGG-ATAGCATA  999

seq1  TCCCAGTTATTTTGGCTTCTGTTTAT-AAAATAGGGTCAAACTGTTTTTT  1049
      |||||||   |||||||||||||||| |||| |||||||||||| |||||
seq2  TCCCAGT--ATTTGGCTTCTGTTTATAAAAAAAGGGTCAAACTGGTTTTT  1047

seq1  AAGCTTTCTTTTTTTTTTTTTTCCTTCCTCCCCTC-CCCCCACTCCCACT  1098
      |||||| |||||||||||||   ||| |||||||| ||| ||||||   |
seq2  AAGCTTCCTTTTTTTTTTTT---CTT-CTCCCCTCTCCCACACTCCACAT  1093

seq1  TCTTGGCCCTGGCATTCCCCTGTACTT-AGGCATAAAAAGTTTGCACGAC  1147
      ||| ||||  |||||  |||||||||| ||||  |||||||||| |||| 
seq2  TCTGGGCCTGGGCAT--CCCTGTACTTAAGGCGAAAAAAGTTTGTACGA-  1140

seq1  CAATGGGCCTTTCTTTCCACTGATGGCCAACTAGGC  1183
      ||||||    |||||||   |||||||| |||||||
seq2  CAATGG---CTTCTTTC--ATGATGGCC-ACTAGGC  1170


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