BAC Information

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BAC

Clone NameB6Ng01-027C07
Chromosome3 (Build37)
Map Location 132,465,868 - 132,599,021
singlet/doubletdoublet
Overlap geneLOC668858, Npnt
Upstream geneOlfr375-ps1, Dkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik
Downstream geneGstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik, EG620205, LOC100039168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027C07.bB6Ng01-027C07.g
ACCDH857971DH857972
length843471
definitionDH857971|Mus musculus domesticus DNA, BAC clone: B6Ng01-027C07, 5' end.DH857972|Mus musculus domesticus DNA, BAC clone: B6Ng01-027C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,465,868 - 132,466,711)(132,598,545 - 132,599,021)
sequence
gaattccagttgactagccagaagttctgatctggtgcttcaagaatttg
aaatcactttactctttttaacatcttattttgtattttgcttgagcctt
taattaaaatcattgtctcctaagccatcagaaaaaggctgggaacgtgg
cttagtccagtgcttaatacacgagcccggggatctgagtgtggatccac
agaggtcagatgagaagcagctgagagtcatggcgtgtgcccatgtctgc
aatcgcagcactgtaggctgcagagacccgaagggccctggagcttcctg
gtcaggccatccaaccgaatcagtgagccccgcctgggtcaccaaagacc
ctttcccaacaacaaggtagagagtgatagaagatactcaacatcaacct
ctgacctctacaggtgtgcatgcgcgcgcgcgcacacacacacacacaca
cacacagaaacagacagacagacagacagacagacagacagacagactta
gcaacctgacttgaaatgttcactatccataattgaacactaaaggaaaa
gagttagtactgctctatgccacttgagagtggggttggctcaaggcaat
gaggacaggaatatgctatcacccttctttctcaaccatcccaaaggact
catcttgtgaattactctcttttataatatacttaatcttgccagttttg
gtggcacttctcagtgtttaagatctattattactatcatcatcatattt
actactactactattattattattagaattatgtatatttggtgaatgca
gatacccatgatgtcagagacattgggtcttctcgagctggag
cataaatgataaaaggtatttgttgctaaactgacagtaattgtcccatg
cataatttttttcttttacttaattgaaaaactttttatataatatattg
tgatcatgttttttcttcccccaattactcccgatccttcctacctaccc
acccaactttatgttcttttatgttttcttttataaaaattaacatttat
ttttattatatacatataatatacattcacatgtatgattgttttgcata
cacatatgactaggcaacatgcccatgacttgtgttcatgtaagctagaa
ggggccatcagatcacctggaactggaatagcagaaggttgtgagctgtc
atgtaggtgctgggaatcaaacctgggtcctctagaagaacagccagtgc
tcttaatcgattagccatctttccagcctcagtttttaatttttaaaagt
atgtatgggggtggggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132465868_132466711
seq2: B6Ng01-027C07.b_43_885

seq1  GAATTCCAGTTGACTAGCCAGAAGTTCTGATCTGGTGCTTCAAGAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTGACTAGCCAGAAGTTCTGATCTGGTGCTTCAAGAATTTG  50

seq1  AAATCACTTTACTCTTTTTAACATCTTATTTTGTATTTTGCTTGAGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTTTACTCTTTTTAACATCTTATTTTGTATTTTGCTTGAGCCTT  100

seq1  TAATTAAAATCATTGTCTCCTAAGCCATCAGAAAAAGGCTGGGAACGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAATCATTGTCTCCTAAGCCATCAGAAAAAGGCTGGGAACGTGG  150

seq1  CTTAGTCCAGTGCTTAATACACGAGCCCGGGGATCTGAGTGTGGATCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCCAGTGCTTAATACACGAGCCCGGGGATCTGAGTGTGGATCCAC  200

seq1  AGAGGTCAGATGAGAAGCAGCTGAGAGTCATGGCGTGTGCCCATGTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCAGATGAGAAGCAGCTGAGAGTCATGGCGTGTGCCCATGTCTGC  250

seq1  AATCGCAGCACTGTAGGCTGCAGAGACCCGAAGGGCCCTGGAGCTTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCAGCACTGTAGGCTGCAGAGACCCGAAGGGCCCTGGAGCTTCCTG  300

seq1  GTCAGGCCATCCAACCGAATCAGTGAGCCCCGCCTGGGTCACCAAAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCCATCCAACCGAATCAGTGAGCCCCGCCTGGGTCACCAAAGACC  350

seq1  CTTTCCCAACAACAAGGTAGAGAGTGATAGAAGATACTCAACATCAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAACAACAAGGTAGAGAGTGATAGAAGATACTCAACATCAACCT  400

seq1  CTGACCTCTACAGGTGTGCATGCGCGCGCGCGCACACACACACACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCTACAGGTGTGCATGCGCGCGCGCGCACACACACACACACACA  450

seq1  CACACAGAAACAGACAGACAGACAGACAGACAGACAGACAGACAGACTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAACAGACAGACAGACAGACAGACAGACAGACAGACAGACTTA  500

seq1  GCAACCTGACTTGAAATGTTCACTATCCATAATTGAACACTAAAGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGACTTGAAATGTTCACTATCCATAATTGAACACTAAAGGAAAA  550

seq1  GAGTTAGTACTGCTCTATGCCACTTGAGAGTGGGGTTGGCTCAAGGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGTACTGCTCTATGCCACTTGAGAGTGGGGTTGGCTCAAGGCAAT  600

seq1  GAGGACAGGAATATGCGATCACCCTTCTTTCTCAACCATCCCAAAGGACT  650
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGGACAGGAATATGCTATCACCCTTCTTTCTCAACCATCCCAAAGGACT  650

seq1  CATCTTGTGAATTACTCTCTTTTATAATATACTTAATCTTGCCAGTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTGAATTACTCTCTTTTATAATATACTTAATCTTGCCAGTTTTG  700

seq1  GTGGCACTTCTCAGTGTTTAAGATCTATTATTACTATCATCATCATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTTCTCAGTGTTTAAGATCTATTATTACTATCATCATCATATTT  750

seq1  ACTACTACTACTATTATTATTATTAGAATTATGTATATTTGGTGAATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACTACTATTATTATTATTAGAATTATGTATATTTGGTGAATGCA  800

seq1  GATACCCACAGATGTCAGAGACATTGGGTCTCCTCGAGCTGGAG  844
      ||||||||  ||||||||||||||||||||| ||||||||||||
seq2  GATACCCA-TGATGTCAGAGACATTGGGTCTTCTCGAGCTGGAG  843

seq1: chr3_132598545_132599021
seq2: B6Ng01-027C07.g_67_543 (reverse)

seq1  TCTCTCCCCACCCCCATACATACTTTTAAAAATTAAAAACTGAGGCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCACCCCCATACATACTTTTAAAAATTAAAAACTGAGGCTGGA  50

seq1  AAGATGGCTAATCGATTAAGAGCACTGGCTGTTCTTCTAGAGGACCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCTAATCGATTAAGAGCACTGGCTGTTCTTCTAGAGGACCCAGG  100

seq1  TTTGATTCCCAGCACCTACATGACAGCTCACAACCTTCTGCTATTCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTCCCAGCACCTACATGACAGCTCACAACCTTCTGCTATTCCAGT  150

seq1  TCCAGGTGATCTGATGGCCCCTTCTAGCTTACATGAACACAAGTCATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTGATCTGATGGCCCCTTCTAGCTTACATGAACACAAGTCATGGG  200

seq1  CATGTTGCCTAGTCATATGTGTATGCAAAACAATCATACATGTGAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCCTAGTCATATGTGTATGCAAAACAATCATACATGTGAATGTA  250

seq1  TATTATATGTATATAATAAAAATAAATGTTAATTTTTATAAAAGAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATGTATATAATAAAAATAAATGTTAATTTTTATAAAAGAAAACA  300

seq1  TAAAAGAACATAAAGTTGGGTGGGTAGGTAGGAAGGATCGGGAGTAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAACATAAAGTTGGGTGGGTAGGTAGGAAGGATCGGGAGTAATTG  350

seq1  GGGGAAGAAAAAACATGATCACAATATATTATATAAAAAGTTTTTCAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGAAAAAACATGATCACAATATATTATATAAAAAGTTTTTCAATT  400

seq1  AAGTAAAAGAAAAAAATTATGCATGGGACAATTACTGTCAGTTTAGCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGAAAAAAATTATGCATGGGACAATTACTGTCAGTTTAGCAAC  450

seq1  AAATACCTTTTATCATTTATGGAATTC  477
      |||||||||||||||||||||||||||
seq2  AAATACCTTTTATCATTTATGGAATTC  477