BAC Information

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BAC

Clone NameB6Ng01-029F22
Chromosome3 (Build37)
Map Location 21,888,405 - 21,889,544
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665094, LOC100040325, 7530428D23Rik, LOC100039465
Downstream geneLOC100040353, Tbl1xr1, LOC545506, LOC675593, LOC100040378, LOC623751
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029F22.bB6Ng01-029F22.g
ACCDH859588DH859589
length1,1301,156
definitionDH859588|Mus musculus domesticus DNA, BAC clone: B6Ng01-029F22, 5' end.DH859589|Mus musculus domesticus DNA, BAC clone: B6Ng01-029F22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctagtaaaaaacaacggcatctatttgtctcaatgttaacca
cgtaaacttggccctttaaaaaattacatgtgggtttttttttcattttg
tgtgtatgtgcaagtcataaggcaactttgtggaatcatttatttcctcc
cctctacatgggcaccaaatgaactcaagctcagcttgtcaggttttcgt
gataagtaactttacaccctgaaccacccctctcccctcttcaatgggct
agttttacatgcaacttttttttttctttttagcacttatgcctcagagt
tagtattgaggggagtatacaaaaggacccttctgtactatgttagacca
atgacctgaagttactattccctcaccacccgaaccccatactctgactt
ttcccctagtaaataaaatgataattgctggacagtgaaaccaagcaaaa
ttacataaacataccaagctataggagacatttcctgctaaagattcctt
aagtttggccatctagcttttcctgcatgcacacccatccaacaagtaag
tttcctctgagaaatgcctgcagcatcaatagcagccaatcagaatctct
aaggaatgtgacttagtcagttgctagactgagctgatttcattcaagcc
tcaaagcaaagaaatataatactacaattaatttgagttaatgaggtaga
tacaattgcctttagaagtttgtcttgctgattctaaacacctgtgagga
caggcattaaatatacatgagacatataaacagttcattaaatgctgtta
gtctgtttctgtagcacgtgttgattttctttattaacatgcactaacaa
gcttgatcatgacattttcttacacgtatacaacacacatgcacacgttg
ctttgtactcagatcccatgaatctaaggattaatttatattatctgaga
ctcttggggaccagcgatagagatatgtattgtgagagaatggatatgta
gcttagttggttgagtgtttgtctgcatagctgcacccttgcttcagtgc
agcattgtaggaggtggtgttgtatgcctgtaatccactttttgttaggt
aaggtagaagcatggcatcctcagctctca
gaattctcatctgaggaataccgagtggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaagtgcaaatcaaaacaacctgagatt
ccacttcactccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccagaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagatgctgaaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaaacacaaagg
aactcacacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaatttgctaaacacatgaaattcaaga
agaacgaagaccaaagtgtggacactttgccccttcttagaaatgggaac
aaaacacccattgaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgccatatgcagggatccatcccataatca
gctcccaaatgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactatgccggggcctagcaaaca
cagaattggatgggtcacacggctcccaatggaaggagctagagaagtac
ccaaggagctaaagggatctgcaaccctataggtggaacacatatgaact
aaccatactccggagcttcttgactctagctgctatgtatcaaaagaatg
gctagtgtcatcactgcaaaaaaaggctcaatggacttgcactgttatgt
cctcagatcaggaaacgctcagtgtcaaatcaagagttgggtgggttagt
ggattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_21888405_21889544
seq2: B6Ng01-029F22.b_46_1175 (reverse)

seq1  TGAG-GCTGAGGATGGCATGGCCTTCTTACCTCTACCTTACAAGAGTTGG  49
      |||| |||||||||| ||||  |||| ||||| ||||| |||| |  |||
seq2  TGAGAGCTGAGGATGCCATG--CTTC-TACCT-TACCTAACAAAAAGTGG  46

seq1  AATTACAGGCATACAACACCACTTCCTACAATGCTGGCACTGAAGCCAGG  99
       ||||||||||||||||||||| |||||||||||| |||||||||| |||
seq2  -ATTACAGGCATACAACACCACCTCCTACAATGCT-GCACTGAAGCAAGG  94

seq1  GTTGCACGCTATGCAGACAAACACTCAACCAACTAAGCTACATATCCATT  149
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  G-TGCA-GCTATGCAGACAAACACTCAACCAACTAAGCTACATATCCATT  142

seq1  CTCTTCACAATACATTATCTCTATCGCTGGTTCCCAAGGGTCTCAGATAA  199
      ||| |||||||||| |||||||||||||||| |||||| |||||||||||
seq2  CTC-TCACAATACA-TATCTCTATCGCTGGTCCCCAAGAGTCTCAGATAA  190

seq1  TATAAATTAATCCTTAGATTCATGGGATCTTGAGTACAAAGCAACGTGTG  249
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TATAAATTAATCCTTAGATTCATGGGATC-TGAGTACAAAGCAACGTGTG  239

seq1  CATGTGTGTTGTATACGTGTAAGAAAATGTCATGATCAAGCTTGTTAGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTTGTATACGTGTAAGAAAATGTCATGATCAAGCTTGTTAGTG  289

seq1  CATGTTAATAAAGAAAATCAACACGTGCTACAGAAACAGACTAACAGCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAATAAAGAAAATCAACACGTGCTACAGAAACAGACTAACAGCAT  339

seq1  TTAATGAACTGTTTATATGTCTCATGTATATTTAATGCCTGTCCTCACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAACTGTTTATATGTCTCATGTATATTTAATGCCTGTCCTCACAG  389

seq1  GTGTTTAGAATCAGCAAGACAAACTTCTAAAGGCAATTGTATCTACCTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAGAATCAGCAAGACAAACTTCTAAAGGCAATTGTATCTACCTCA  439

seq1  TTAACTCAAATTAATTGTAGTATTATATTTCTTTGCTTTGAGGCTTGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCAAATTAATTGTAGTATTATATTTCTTTGCTTTGAGGCTTGAAT  489

seq1  GAAATCAGCTCAGTCTAGCAACTGACTAAGTCACATTCCTTAGAGATTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGCTCAGTCTAGCAACTGACTAAGTCACATTCCTTAGAGATTCT  539

seq1  GATTGGCTGCTATTGATGCTGCAGGCATTTCTCAGAGGAAACTTACTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCTGCTATTGATGCTGCAGGCATTTCTCAGAGGAAACTTACTTGT  589

seq1  TGGATGGGTGTGCATGCAGGAAAAGCTAGATGGCCAAACTTAAGGAATCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGGTGTGCATGCAGGAAAAGCTAGATGGCCAAACTTAAGGAATCT  639

seq1  TTAGCAGGAAATGTCTCCTATAGCTTGGTATGTTTATGTAATTTTGCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGAAATGTCTCCTATAGCTTGGTATGTTTATGTAATTTTGCTTG  689

seq1  GTTTCACTGTCCAGCAATTATCATTTTATTTACTAGGGGAAAAGTCAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTGTCCAGCAATTATCATTTTATTTACTAGGGGAAAAGTCAGAG  739

seq1  TATGGGGTTCGGGTGGTGAGGGAATAGTAACTTCAGGTCATTGGTCTAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGTTCGGGTGGTGAGGGAATAGTAACTTCAGGTCATTGGTCTAAC  789

seq1  ATAGTACAGAAGGGTCCTTTTGTATACTCCCCTCAATACTAACTCTGAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTACAGAAGGGTCCTTTTGTATACTCCCCTCAATACTAACTCTGAGG  839

seq1  CATAAGTGCTAAAAAGAAAAAAAAAAGTTGCATGTAAAACTAGCCCATTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTGCTAAAAAGAAAAAAAAAAGTTGCATGTAAAACTAGCCCATTG  889

seq1  AAGAGGGGAGAGGGGTGGTTCAGGGTGTAAAGTTACTTATCACGAAAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGAGAGGGGTGGTTCAGGGTGTAAAGTTACTTATCACGAAAACC  939

seq1  TGACAAGCTGAGCTTGAGTTCATTTGGTGCCCATGTAGAGGGGAGGAAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGCTGAGCTTGAGTTCATTTGGTGCCCATGTAGAGGGGAGGAAAT  989

seq1  AAATGATTCCACAAAGTTGCCTTATGACTTGCACATACACACAAAATGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTCCACAAAGTTGCCTTATGACTTGCACATACACACAAAATGAA  1039

seq1  AAAAAAACCCACATGTAATTTTTTAAAGGGCCAAGTTTACGTGGTTAACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCCACATGTAATTTTTTAAAGGGCCAAGTTTACGTGGTTAACA  1089

seq1  TTGAGACAAATAGATGCCGTTGTTTTTTACTAGAGGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAAATAGATGCCGTTGTTTTTTACTAGAGGAATTC  1130