BAC Information

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BAC

Clone NameB6Ng01-029M03
Chromosome3 (Build37)
Map Location 112,024,559 - 112,025,711
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668712, LOC625585
Downstream geneEG229746, LOC668717, Utp14B-ps, EG433643, OTTMUSG00000022462, LOC668723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029M03.bB6Ng01-029M03.g
ACCDH859866DH859867
length1,142339
definitionDH859866|Mus musculus domesticus DNA, BAC clone: B6Ng01-029M03, 5' end.DH859867|Mus musculus domesticus DNA, BAC clone: B6Ng01-029M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagatacgtcagaaagcaatatgatatttttctccatttctgc
tgcaaaaccaataattcctcttcttggtttatatctttgactggataata
tacagaattctccatagagacagagccaaggggataatacatacaaataa
tctctatggtagcattctacagtcacccttaaggacagaaaaatagggag
acttaggaccattcataaaagagtttactacatattagaacttatgcata
tcacttgtagagtgcaaaatatactgtattattatacctcatccaatgtg
aatgctgtataaataattgttgtatacaatgtttaggaaacattgatgaa
agtaattctgtttatgtccagtaaaggataattctttcataataactacc
tgcacttggttgtggttcagaatttgttaaagcagattagttgctttatg
tatgtgcggagtgaaggatgggaggatggagagagacttaagtcaactca
tatccacctattgattggctcatgggtttatgtaaattagtaagtcatca
atctacaagacactctgtcagagcagagacatctggccagaaagtgttat
tatcatgttgaggcataattcctcaggaaaattcagctttataattacta
actttcaactgattggatgaagccaggattgtagaaagtaatctacttaa
agtcaattgattataggtgttatccacatctagaaaatgccttcacagca
gcaccaagattagtgcttaatcaaacgactgagtattatagcttacctaa
gctgacacattaagcccctgttacagtttttttcattaacaactttgtac
ccataagtaacaacttgatttatgaattgtttcttacagtactcctgatt
aaaccaggggttttctgacactagacaaacactctattactgagctacaa
atataaccctctctctactttgtgtttcaagccaaagtctcactatatta
ctcagttggttttacctcactcaatagtacaagccttaaactgattatcc
ctgcctaatctgcttaaggatttgataaaaatttcacatcccatttaaat
aataactttctatcactgaacatttctatctccctatctctg

actcagccaacaatggaccccaatggtggagtttggggaaggactgaagg
agctgaaggtgttagcaaacccacaggaagaacaatatctaccaaccaga
ccctccaaagatcccaggaactaaaccaccaccaaaagagtacacatgga
gggacccatgcctccaagctgcataggtagcagaggattacctcatctgg
cctcagtgggacaggagccccttggacctatggaggctagaagacccagc
atagggaaatgatatggcactgcggtaggagatgtggaagggagagggaa
gcaccctcatagaaacagggggaatgggggaggggatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112024559_112025711
seq2: B6Ng01-029M03.b_42_1183

seq1  GAATTCAAAGATACGTCAGAAAGCAATATGATATTTTTCTCCATTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATACGTCAGAAAGCAATATGATATTTTTCTCCATTTCTGC  50

seq1  TGCAAAACCAATAATTCCTCTTCTTGGTTTATATCTTTGACTGGATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACCAATAATTCCTCTTCTTGGTTTATATCTTTGACTGGATAATA  100

seq1  TACAGAATTCTCCATAGAGACAGAGCCAAGGGGATAATACATACAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATTCTCCATAGAGACAGAGCCAAGGGGATAATACATACAAATAA  150

seq1  TCTCTATGGTAGCATTCTACAGTCACCCTTAAGGACAGAAAAATAGGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATGGTAGCATTCTACAGTCACCCTTAAGGACAGAAAAATAGGGAG  200

seq1  ACTTAGGACCATTCATAAAAGAGTTTACTACATATTAGAACTTATGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGACCATTCATAAAAGAGTTTACTACATATTAGAACTTATGCATA  250

seq1  TCACTTGTAGAGTGCAAAATATACTGTATTATTATACCTCATCCAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTAGAGTGCAAAATATACTGTATTATTATACCTCATCCAATGTG  300

seq1  AATGCTGTATAAATAATTGTTGTATACAATGTTTAGGAAACATTGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTATAAATAATTGTTGTATACAATGTTTAGGAAACATTGATGAA  350

seq1  AGTAATTCTGTTTATGTCCAGTAAAGGATAATTCTTTCATAATAACTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTCTGTTTATGTCCAGTAAAGGATAATTCTTTCATAATAACTACC  400

seq1  TGCACTTGGTTGTGGTTCAGAATTTGTTAAAGCAGATTAGTTGCTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTGGTTGTGGTTCAGAATTTGTTAAAGCAGATTAGTTGCTTTATG  450

seq1  TATGTGCGGAGTGAAGGATGGGAGGATGGAGAGAGACTTAAGTCAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCGGAGTGAAGGATGGGAGGATGGAGAGAGACTTAAGTCAACTCA  500

seq1  TATCCACCTATTGATTGGCTCATGGGTTTATGTAAATTAGTAAGTCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACCTATTGATTGGCTCATGGGTTTATGTAAATTAGTAAGTCATCA  550

seq1  ATCTACAAGACACTCTGTCAGAGCAGAGACATCTGGCCAGAAAGTGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAAGACACTCTGTCAGAGCAGAGACATCTGGCCAGAAAGTGTTAT  600

seq1  TATCATGTTGAGGCATAATTCCTCAGGAAAATTCAGCTTTATAATTACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTTGAGGCATAATTCCTCAGGAAAATTCAGCTTTATAATTACTA  650

seq1  ACTTTCAACTGATTGGATGAAGCCAGGATTGTAGAAAGTAATCTACTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAACTGATTGGATGAAGCCAGGATTGTAGAAAGTAATCTACTTAA  700

seq1  AGTCAATTGATTATAGGTGTTATCCACATCTAGAAAATGCCTTCACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATTGATTATAGGTGTTATCCACATCTAGAAAATGCCTTCACAGCA  750

seq1  GCACCAAGATTAGTGCTTAATCAAACGACTGAGTATTATAGCTTACCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAGATTAGTGCTTAATCAAACGACTGAGTATTATAGCTTACCTAA  800

seq1  GCTGACACATTAAGCCCCTGTTACAGTTTTTTTCATTAACAACTTTGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACACATTAAGCCCCTGTTACAGTTTTTTTCATTAACAACTTTGTAC  850

seq1  CCATAAGTAACAACTTGATTTATGAATTGTTTCTTACAGTACTCCTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGTAACAACTTGATTTATGAATTGTTTCTTACAGTACTCCTGATT  900

seq1  AAACCAGGGGTTTTCTGAACACTAGACAAACACTCTATTACTGAGCTACA  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAACCAGGGGTTTTCTG-ACACTAGACAAACACTCTATTACTGAGCTACA  949

seq1  AATATAACCCTCTCTCTACTTTGTGTTTCAAGCCAAAGTCTCACTATATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAACCCTCTCTCTACTTTGTGTTTCAAGCCAAAGTCTCACTATATT  999

seq1  ACTCAGGTTGGTTTTTACCTCACTCAATAGTACAAAGCCTTAAACTGATT  1050
      ||||| ||||| ||||||||||||||||||||| ||||||||||||||||
seq2  ACTCA-GTTGG-TTTTACCTCACTCAATAGTAC-AAGCCTTAAACTGATT  1046

seq1  ATCCCCTGCCTTAATCTGCTAAGGAATTTAGATAAAAATTTTAAACAT-C  1099
      || ||||||| ||||||||| | | |||| |||||||||||   |||| |
seq2  AT-CCCTGCC-TAATCTGCTTAAGGATTT-GATAAAAATTT--CACATCC  1091

seq1  CATTTAATATATAACTTTCTTATTCAACTGAACATTTTCTATCT-CCTAT  1148
      |||||||   ||||||||| |||   |||||||| ||||||||| |||||
seq2  CATTTAAATAATAACTTTC-TAT--CACTGAACA-TTTCTATCTCCCTAT  1137

seq1  CTCTG  1153
      |||||
seq2  CTCTG  1142


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