BAC Information

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BAC

Clone NameB6Ng01-030E22
Chromosome3 (Build37)
Map Location 57,228,910 - 57,358,847
singlet/doubletdoublet
Overlap geneTm4sf4, Wwtr1
Upstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862
Downstream geneCommd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216, 4921539H07Rik, Tsc22d2, D3Ucla1, Eif2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030E22.bB6Ng01-030E22.g
ACCDH860254DH860255
length1,096937
definitionDH860254|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E22, 5' end.DH860255|Mus musculus domesticus DNA, BAC clone: B6Ng01-030E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,357,744 - 57,358,847)(57,228,910 - 57,229,852)
sequence
gaattcatagtttgaggcaggtttgggctgcctagtgagaaagactctta
tctcaaaacagaacaaaacaaaaagaaaagagaaactgggaggccgaggc
ctttgctgccttcagacttgataatggtgtaggagttgggaaacaccttt
tcttttccttgagctgttctttgaactatttggcagagataactgcaaga
ctgtgtcatctcattggaatttttcttggtactgtttgaaatagatacac
tccttctaaataaccatttttccccccagcctctgaaaattcacattgtc
tctgctcttgtgagggttatacacattctgccagctggggaagacactgg
caagaatgggcttgtcgcctgaggtactgaagcgtaccagtggccaacgt
tgactccagtggcagtgtcttagaatttgctcatttggttttctttgctg
cggagggtgcagctcataaaaagcttctccaaactgtcttaaccgtaggc
ctttaccacaaacatggctcaggggatatgaaaaagcaaggagaacctga
cctgggcgtgaaacctttgtaaatctcatagatgacaagctcacgtggcc
tcaagggctatgcaacatggatgtctccagttggcttgacatcacatttg
acacttgtggtctgagagtgccctctctagccacagtgcttctccttagg
ctgttacggtgaattcccttttcccggcttagctgtaaggcacctgtcat
gtgtttctctctcaagcctcttcacctttatgagcatcaggaagatggta
ttgacatcaaatttttgggttcatctgcttcatttcattgcttggcataa
atatggggttgacttcctcacatatgactccttacccccacagtgaaatg
agggtagtggttttaaatttggattgtagtcagagaagtgacaataaagt
tcttgccagataaatactgatgtccactttaatgtggaatttctgataaa
cattggatgaatttttgcatggagtacctcccaatgccgggcgagtggtg
ggtactgtgctttaatccagccttgggaggacaaggcggggggatt
gaattcagcagtatccaataagtccgtggaattgcttctctattaaggaa
agcaaggccatctggataagcctgtgtttcaggctttccgtgaacaagac
caaggaagagccaagcagatcacttagtgtttgggagtcataacattaat
caggatattagtgggttatgagagtgatgtatataatgcccagggaatac
ttctttatttgggcagagacattatgaaattaaaggggcagtgctgagca
ctgcttgtcccagccttctcttcaattgcaacaacttgaatgtcttgtct
gtgctggtggattattaacagaggttattggtctccatggcaaaacaatt
gaacgatcgcacaaaacgtaatctcatttatggggttggaaaaaaaagag
agagagagagacatagagtcagggatataaatatccattgccactgaagg
cctgccgtagttgagaagtgaagtgtctccaaggttcaaagaactctgat
atttggtcccacttttcttattgaccccggtacagccactggaacgtgct
gctgcaatccctgaggagaaccgtcaagctggtggcgacgagcctttgat
ctctgtgctttcctgtgaccccccagcatgtgtactgggggctgtgccag
gtgcctggggggcaccctcattcccctggctgtgtttggccttcctggca
aatatcctgttgttctttcctggaggaaaagtggtgaacgacaaaagcca
cctttcggatgaggtctggtacttcggagaatattgggaagttgagtctt
ggtgagtagagaaccttaacattccccacgaaggcaaatctcgtctgtcc
ttattgcaggagatgccattttgaagctacactatatgcgatgaaagtag
tgccctaatatacttccccttatattccggcttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_57357744_57358847
seq2: B6Ng01-030E22.b_42_1137 (reverse)

seq1  AATCCACCCGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTA-CCA  49
      ||||| |||||||   ||||||||| ||| |||||||||    ||| |||
seq2  AATCCCCCCGCCTTGTCCTCCCAAG-GCT-GGATTAAAGCACAGTACCCA  48

seq1  CCACT-GCCCGGCA-TGGGATGTACT-CATGCAAAAAATTCATCCAATGT  96
      ||||| |||||||| ||||| ||||| ||||| |||||||||||||||||
seq2  CCACTCGCCCGGCATTGGGAGGTACTCCATGC-AAAAATTCATCCAATGT  97

seq1  TTATCAGAAATT-CACATTTAAGTGGACATCAGTATTTTATCTGGCAAGA  145
      |||||||||||| |||||| ||||||||||||||| ||||||||||||||
seq2  TTATCAGAAATTCCACATTAAAGTGGACATCAGTA-TTTATCTGGCAAGA  146

seq1  ACTTTTATTGTTCACCTTCTTCTTGACTACAATCCAAATTTAAAAACCAC  195
      || ||||||| ||| |||||   |||||||||||||||||| ||||||||
seq2  AC-TTTATTG-TCA-CTTCT--CTGACTACAATCCAAATTT-AAAACCAC  190

seq1  TTACCCTCATTTTCACTGTTGGGGGTAAGGAGTCATATGTGAGGAAGTCA  245
       |||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  -TACCCTCA-TTTCACTG-TGGGGGTAAGGAGTCATATGTGAGGAAGTCA  237

seq1  ACCCCATATTTATGCCAAGCAATGAAATGAAGCAGATGAACCCAAAAATT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATATTTATGCCAAGCAATGAAATGAAGCAGATGAACCCAAAAATT  287

seq1  TGATGTCAATACCATCTTCCTGATGCTCATAAAGGTGAAGAGGCTTGAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCAATACCATCTTCCTGATGCTCATAAAGGTGAAGAGGCTTGAGA  337

seq1  GAGAAACACATGACAGGTGCCTTACAGCTAAGCCGGGAAAAGGGAATTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACACATGACAGGTGCCTTACAGCTAAGCCGGGAAAAGGGAATTCA  387

seq1  CCGTAACAGCCTAAGGAGAAGCACTGTGGCTAGAGAGGGCACTCTCAGAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAACAGCCTAAGGAGAAGCACTGTGGCTAGAGAGGGCACTCTCAGAC  437

seq1  CACAAGTGTCAAATGTGATGTCAAGCCAACTGGAGACATCCATGTTGCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTGTCAAATGTGATGTCAAGCCAACTGGAGACATCCATGTTGCAT  487

seq1  AGCCCTTGAGGCCACGTGAGCTTGTCATCTATGAGATTTACAAAGGTTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGAGGCCACGTGAGCTTGTCATCTATGAGATTTACAAAGGTTTC  537

seq1  ACGCCCAGGTCAGGTTCTCCTTGCTTTTTCATATCCCCTGAGCCATGTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCAGGTCAGGTTCTCCTTGCTTTTTCATATCCCCTGAGCCATGTTT  587

seq1  GTGGTAAAGGCCTACGGTTAAGACAGTTTGGAGAAGCTTTTTATGAGCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAAGGCCTACGGTTAAGACAGTTTGGAGAAGCTTTTTATGAGCTG  637

seq1  CACCCTCCGCAGCAAAGAAAACCAAATGAGCAAATTCTAAGACACTGCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCGCAGCAAAGAAAACCAAATGAGCAAATTCTAAGACACTGCCA  687

seq1  CTGGAGTCAACGTTGGCCACTGGTACGCTTCAGTACCTCAGGCGACAAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCAACGTTGGCCACTGGTACGCTTCAGTACCTCAGGCGACAAGC  737

seq1  CCATTCTTGCCAGTGTCTTCCCCAGCTGGCAGAATGTGTATAACCCTCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTGCCAGTGTCTTCCCCAGCTGGCAGAATGTGTATAACCCTCAC  787

seq1  AAGAGCAGAGACAATGTGAATTTTCAGAGGCTGGGGGGAAAAATGGTTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGAGACAATGTGAATTTTCAGAGGCTGGGGGGAAAAATGGTTAT  837

seq1  TTAGAAGGAGTGTATCTATTTCAAACAGTACCAAGAAAAATTCCAATGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGAGTGTATCTATTTCAAACAGTACCAAGAAAAATTCCAATGAG  887

seq1  ATGACACAGTCTTGCAGTTATCTCTGCCAAATAGTTCAAAGAACAGCTCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACAGTCTTGCAGTTATCTCTGCCAAATAGTTCAAAGAACAGCTCA  937

seq1  AGGAAAAGAAAAGGTGTTTCCCAACTCCTACACCATTATCAAGTCTGAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGAAAAGGTGTTTCCCAACTCCTACACCATTATCAAGTCTGAAG  987

seq1  GCAGCAAAGGCCTCGGCCTCCCAGTTTCTCTTTTCTTTTTGTTTTGTTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAAGGCCTCGGCCTCCCAGTTTCTCTTTTCTTTTTGTTTTGTTCT  1037

seq1  GTTTTGAGATAAGAGTCTTTCTCACTAGGCAGCCCAAACCTGCCTCAAAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGATAAGAGTCTTTCTCACTAGGCAGCCCAAACCTGCCTCAAAC  1087

seq1  TATGAATTC  1104
      |||||||||
seq2  TATGAATTC  1096

seq1: chr3_57228910_57229852
seq2: B6Ng01-030E22.g_67_1003

seq1  GAATTCAGCAGTATCCAATAAGTCCGTGGAATTGCTTCTCTATTAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGTATCCAATAAGTCCGTGGAATTGCTTCTCTATTAAGGAA  50

seq1  AGCAAGGCCATCTGGATAAGCCTGTGTTTCAGGCTTTCCGTGAACAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCCATCTGGATAAGCCTGTGTTTCAGGCTTTCCGTGAACAAGAC  100

seq1  CAAGGAAGAGCCAAGCAGATCACTTAGTGTTTGGGAGTCATAACATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGAGCCAAGCAGATCACTTAGTGTTTGGGAGTCATAACATTAAT  150

seq1  CAGGATATTAGTGGGTTATGAGAGTGATGTATATAATGCCCAGGGAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATATTAGTGGGTTATGAGAGTGATGTATATAATGCCCAGGGAATAC  200

seq1  TTCTTTATTTGGGCAGAGACATTATGAAATTAAAGGGGCAGTGCTGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTGGGCAGAGACATTATGAAATTAAAGGGGCAGTGCTGAGCA  250

seq1  CTGCTTGTCCCAGCCTTCTCTTCAATTGCAACAACTTGAATGTCTTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTCCCAGCCTTCTCTTCAATTGCAACAACTTGAATGTCTTGTCT  300

seq1  GTGCTGGTGGATTATTAACAGAGGTTATTGGTCTCCATGGCAAAACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGTGGATTATTAACAGAGGTTATTGGTCTCCATGGCAAAACAATT  350

seq1  GAACGATCGCACAAAACGTAATCTCATTTATGGGGTTGGAAAAAAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGATCGCACAAAACGTAATCTCATTTATGGGGTTGGAAAAAAAAGAG  400

seq1  AGAGAGAGAGACATAGAGTCAGGGATATAAATATCCATTGCCACTGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGACATAGAGTCAGGGATATAAATATCCATTGCCACTGAAGG  450

seq1  CCTGCCGTAGTTGAGAAGTGAAGTGTCTCCAAGGTTCAAAGAACTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGTAGTTGAGAAGTGAAGTGTCTCCAAGGTTCAAAGAACTCTGAT  500

seq1  ATTTGGTCCCACTTTTCTTATTGACCCCGGTACAGCCACTGGAACGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCCCACTTTTCTTATTGACCCCGGTACAGCCACTGGAACGTGCT  550

seq1  GCTGCAATCCCTGAGGAGAACCGTCAAGCTGGTGGCGACGAGCCTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAATCCCTGAGGAGAACCGTCAAGCTGGTGGCGACGAGCCTTTGAT  600

seq1  CTCTGTGCTTTCCTGTGACCCCCCAGCATGTGTACTGGGGGCTGTGCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCTTTCCTGTGACCCCCCAGCATGTGTACTGGGGGCTGTGCCAG  650

seq1  GTGCCTGGGGGGCACCCTCATTCCCCTGGCTGTGTTTGGCC-TCCTGGCA  699
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGCCTGGGGGGCACCCTCATTCCCCTGGCTGTGTTTGGCCTTCCTGGCA  700

seq1  AATATCCTGTTGTTCTTTCCTGGAGGAAAAGTGGTGAACGACAAAAGCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCTGTTGTTCTTTCCTGGAGGAAAAGTGGTGAACGACAAAAGCCA  750

seq1  CCTTTCGGATGAGGTCTGGTACTTCGGAGGAATATTGGGAAGTGGAGTCT  799
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  CCTTTCGGATGAGGTCTGGTACTTCGGA-GAATATTGGGAAGTTGAGTCT  799

seq1  TGGTGAGTAGAGAAACCTTAACATT-CCCACGAAGGCAAATCCTCGTCTG  848
      |||||||||||| |||||||||||| ||||||||||||||| ||||||||
seq2  TGGTGAGTAGAG-AACCTTAACATTCCCCACGAAGGCAAAT-CTCGTCTG  847

seq1  TCCTTATTGCAGGAGATGCCATTTTGAAGCTTACAACCTATATGCGATGA  898
      |||||||||||||||||||||||||||||| ||||  |||||||||||| 
seq2  TCCTTATTGCAGGAGATGCCATTTTGAAGC-TACA--CTATATGCGATG-  893

seq1  AAAGTAGTGCCCTAATATACTTCCCCTTTCTATTCGCGGCTGGGG-  943
      |||||||||||||||||||||||||| || ||||| ||||| ||| 
seq2  AAAGTAGTGCCCTAATATACTTCCCC-TTATATTC-CGGCTTGGGG  937