BAC Information

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BAC

Clone NameB6Ng01-030G23
Chromosome3 (Build37)
Map Location 133,766,128 - 133,767,018
singlet/doubletsinglet
Overlap geneLOC100039168
Upstream geneInts12, 9130221D24Rik, Ppa2, E130014J05Rik, EG620205
Downstream geneLOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1, LOC100039234, Tacr3, LOC229837
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030G23.bB6Ng01-030G23.g
ACCDH860345DH860346
length1,181896
definitionDH860345|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G23, 5' end.DH860346|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gattctcaactgaggaatactgaacggctgagaagcacctgaaaaaatat
tcaaaatcattaatcatcagggaaatgcaaatcaaaacaaccctgagatt
tcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
ggtgctggtgaggatgtagagaaagaggaacactcctccattgttggtgg
gattgcaagctggtacaaccactctggaaatcagtttggcagttcctcag
aaatttggacatagtactatctgagaacccagcagtaccactcctgggcg
tatacccagaaggtgctccaacatatagcaaggacacatgctccactatg
ttcatagcagacttatttataataggcagatgccggaaataacccaaatg
tcctttaacagaggaatggatacagaaaatatgatacctttacacaatgg
agtactactcagctattaaaaacgttgacctcatgaaattcttaggcaaa
ttaatggaactagaaaatatcatcctgaatgaggtaaccagttgcaaaag
aacacatgtgatatgcactcactgataagtggatattagcctaaaagctt
agaatacacaagatacaattcacagaccacatgaagctcaagaagaagga
agactaaagtgtggatgcttcagtccttctcagaagggggaaacaaaaac
tcacgggatgaaatatggagactgaaggaaaggccatccagagactgccc
cacctggggttccatccaatgtccagacaccaaacggaaacactattgtg
gatgtcaagaagtgcttgctgacaggagcctgatatagctgtcttctgag
gggctcttccagtgcctgaaaaatacagaaggtgggtgttctcagccagt
cattggactgagcacaggtctccaatggagagtagagaaggtctgaggag
ctgagaagtttgcagccccatagaggacacatatgacacttgagtgtctt
tagacagtgatgatgagctttctattcgctcacctctctctatatggaaa
atttataatactgttattttgccttggcttttctatctcctctgaaacta
ccggtgacatgaccttcaggatgccatctataccggctgttcctcgatct
tccttgattgagaaagccagtgatatggtaa
gaattcattttggaatccaataaggaagtaaagacacaacatctcttact
tatttctgcaatcattcatgttggcaagtgaacaattaccttgggagaaa
gtgaaaccataactactaaaataaacccttaggtggaaagagcaatgaag
tggcattgggagacttgaaaactttgtatgcagatcttttaaaaattttt
gtcatacatagttcaatttctaaatagaacttgctattaattgtattgtg
tgatataaagcacataaaggcagtgagcccggatgatctttgctgcagag
agagaattccgaatatagaagcatggatgtagccagctttgagtctaaaa
atggaaaatgtggatgacttctttccatgaagtctgtttacttaccatgt
aagaggcaaagttattacctctgcagaattaaataggaggttcttcaagt
ttgttgagagacaagttattaaaatggtcatttatgagatgtagaggggg
gattgaccactaaaatatagaacttccaggtggcacaaaaaatagctttc
ataaatccaagtcactgtagctgtatattttcttcagaatggttgcacag
ggttgctgtgtaggtaaaaagctagactcacctggaattaggattccata
agaaaagaatgactggggctaagaggggaagcaactggtatgtgtgtcag
ggagtaggtagtcatggagacaatgctcccaggtcaagagagtgagatgc
aatgctgggtagaaacacttcattacaagactggaagtagttttaagaaa
agacatatgcttgttgaccaaactgggaggagtgtcatttaaaagtagat
aagatgatggaaaccatactggcaaatgacaaacgctggtgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_133766128_133767018
seq2: B6Ng01-030G23.g_68_963

seq1  GAATTCATTTTGGAATCCAATAAGGAAGTAAAGACACAACATCTCTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTGGAATCCAATAAGGAAGTAAAGACACAACATCTCTTACT  50

seq1  TATTTCTGCAATCATTCATGTTGGCAAGTGAACAATTACCTTGGGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGCAATCATTCATGTTGGCAAGTGAACAATTACCTTGGGAGAAA  100

seq1  GTGAAACCATAACTACTAAAATAAACCCTTAGGTGGAAAGAGCAATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACCATAACTACTAAAATAAACCCTTAGGTGGAAAGAGCAATGAAG  150

seq1  TGGCATTGGGAGACTTGAAAACTTTGTATGCAGATCTTTTAAAAATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGGGAGACTTGAAAACTTTGTATGCAGATCTTTTAAAAATTTTT  200

seq1  GTCATACATAGTTCAATTTCTAAATAGAACTTGCTATTAATTGTATTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACATAGTTCAATTTCTAAATAGAACTTGCTATTAATTGTATTGTG  250

seq1  TGATATAAAGCACATAAAGGCAGTGAGCCCGGATGATCTTTGCTGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAAAGCACATAAAGGCAGTGAGCCCGGATGATCTTTGCTGCAGAG  300

seq1  AGAGAATTCCGAATATAGAAGCATGGATGTAGCCAGCTTTGAGTCTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTCCGAATATAGAAGCATGGATGTAGCCAGCTTTGAGTCTAAAA  350

seq1  ATGGAAAATGTGGATGACTTCTTTCCATGAAGTCTGTTTACTTACCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAATGTGGATGACTTCTTTCCATGAAGTCTGTTTACTTACCATGT  400

seq1  AAGAGGCAAAGTTATTACCTCTGCAGAATTAAATAGGAGGTTCTTCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCAAAGTTATTACCTCTGCAGAATTAAATAGGAGGTTCTTCAAGT  450

seq1  TTGTTGAGAGACAAGTTATTAAAATGGTCATTTATGAGATGTAGAGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAGAGACAAGTTATTAAAATGGTCATTTATGAGATGTAGAGGGGG  500

seq1  GATTGACCACTAAAATATAGAACTTCCAGGTGGCACAAAAAATAGCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACCACTAAAATATAGAACTTCCAGGTGGCACAAAAAATAGCTTTC  550

seq1  ATAAATCCAAGTCACTGTAGCTGTATATTTTCTTCAGAATGGTTGCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCAAGTCACTGTAGCTGTATATTTTCTTCAGAATGGTTGCACAG  600

seq1  GGTTGCTGTGTAGGTAAAAAGCTAGACTCACCTGGAATTAGGATTCCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGTGTAGGTAAAAAGCTAGACTCACCTGGAATTAGGATTCCATA  650

seq1  AGAAAAGAATGACTGGGGCTAGGAGGGGAAGCAACTGGTATGTGTGTCAG  700
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAAAAGAATGACTGGGGCTAAGAGGGGAAGCAACTGGTATGTGTGTCAG  700

seq1  GGAGTAGGTAGTCATGGAGACAATGCTCCCAGGTCAGGAGAGTGAGATGC  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGAGTAGGTAGTCATGGAGACAATGCTCCCAGGTCAAGAGAGTGAGATGC  750

seq1  AATGCTGGGTAG-AACACTTCATTACAAGACTGGAAGTAGTTTTAAGGAA  799
      |||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  AATGCTGGGTAGAAACACTTCATTACAAGACTGGAAGTAGTTTTAAGAAA  800

seq1  AGACATATGCTTG-TGACCAAACTGGGA-GAGTGTCATTAAAAAGTTAGA  847
      ||||||||||||| |||||||||||||| |||||||||| ||||| ||||
seq2  AGACATATGCTTGTTGACCAAACTGGGAGGAGTGTCATTTAAAAG-TAGA  849

seq1  TTAGGATGATGG-AACCATAACTGGC-AATGGCAAACGC---TGTTGTG  891
       || |||||||| |||||| |||||| |||| |||||||   |||||||
seq2  -TAAGATGATGGAAACCAT-ACTGGCAAATGACAAACGCTGGTGTTGTG  896