BAC Information

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BAC

Clone NameB6Ng01-030L02
Chromosome3 (Build37)
Map Location 7,604,138 - 7,605,253
singlet/doubletsinglet
Overlap geneIl7
Upstream gene1700008P02Rik, LOC100039349, Olfr289-ps1, EG667801, Pkia, LOC667807, 3110050N22Rik
Downstream geneLOC620822, LOC633072, LOC545500, LOC620966, Stmn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030L02.bB6Ng01-030L02.g
ACCDH860518DH860519
length1,0441,105
definitionDH860518|Mus musculus domesticus DNA, BAC clone: B6Ng01-030L02, 5' end.DH860519|Mus musculus domesticus DNA, BAC clone: B6Ng01-030L02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttactggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatatggataggtaaagatcctttcccaatctgttggtggtctc
tttgtcttaagatggtgtcttttgccttgcagaaactttggagtttcatt
aggtcccatttgtcaattctcgatcttacagcacaagccattgctgttct
gttcaggaatttttcccctgtgcccatatcttcaagtcttttccccactt
tctcctctataagtttcagtgtctctggttttatgtgaagttccttgatc
cacttagatttgaccttagtacacggagataagtatggatcgattcgcat
tcttctacacgataacaaccagttgtgccagcaccaattgttgaaaatgc
tgtctttcttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttaaattctattccattggtc
tacttgtctgtctctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtctggcatggtgattccgccagaagttctttta
tccttgagaagattttttgctatcctaggttttttgttattccagacaaa
tttgcaaattgctccttccaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagataattttggcaagatagccatttttt
acaatgttgatcctgccatccatgagcatgggagatctttccctctttct
gagatcttccttaatttctttcttcagagatttgaagtttttatcataca
gatcttcacttccttagtaagaggcacgccaagatattttatattatttg
tgactattgaagaaaggtgtggtttccctatttccttctcagcctgttaa
ttctgtaaatagaaaggccatcgaacttgttgggttattttcat
gaattccaaagatatatctaaaagaaactgaacccagcaattaatgagca
gaggttagatggcccagcatgttacatgaggttgtttcagtgggatttaa
catctatgtctaataatttaaaaatacttctaagactggcacaggatgga
gctacacaatgaaacttctcacaattaaagcagtgcagcagccaggctaa
gattaggctttttgtttggtgtgtaggttgtatccacatttatgcagaac
agctaggataaaatcagaaatttctgagaggtatccgatggggaggagtg
acagctttgtagttgcatttatgttaaacatccctgaaagaaaacatatc
tacaataagataggtatgctatagtttattaaggtttcttaaagtcatat
ctcatttaacatacatgaaagatgtcatgtgaatgttcatttacacagaa
accatggtccccatgaaggtaaatcctgttttgttttttgttttttgttt
ctttctggaagagcaatgtgaagtgtggtcacctttttggtgcttgcact
atggcgattctttgtgatggactttacagagttttactttgccccctaaa
tcatgttcgcaaactctttcccttatgtcattattttgtgtatctatttt
cccaaagacctagattctgttcaagcatagctctctttaaattccttccc
tgttaggcaaagttcacacaatagactcgagacctctcagctggtgttta
tgactacatcaagtaagtcatgccaatcagagtgaactgtttaattaaaa
ggaaggagattttaaatggaatcatcactttggagtaaattattaagatg
gaaacttctggtacataaaaacgttagccacctatatcttcatgaatctt
gcttttatttttccctgactcagtttgttgaaaatatacttacatgattt
tcccaaattaacgttttaaaatccagtgttcagcatttttatgtgcatct
cctctattaaaggtctaacaatatttctctaacccagaatgacttggaaa
caacttaagaatgtaaggaattatcatagatgcaaattatcatctattaa
catgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7604138_7605253
seq2: B6Ng01-030L02.g_67_1170

seq1  GAATTCCAAAGATATATCTAAAAGAAACTGAACCCAGCAATTAATGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGATATATCTAAAAGAAACTGAACCCAGCAATTAATGAGCA  50

seq1  GAGGTTAGATGGCCCAGCATGTTACATGAGGTTGTTTCAGTGGGATTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAGATGGCCCAGCATGTTACATGAGGTTGTTTCAGTGGGATTTAA  100

seq1  CATCTATGTCTAATAATTTAAAAATACTTCTAAGACTGGCACAGGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATGTCTAATAATTTAAAAATACTTCTAAGACTGGCACAGGATGGA  150

seq1  GCTACACAATGAAACTTCTCACAATTAAAGCAGTGCAGCAGCCAGGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAATGAAACTTCTCACAATTAAAGCAGTGCAGCAGCCAGGCTAA  200

seq1  GATTAGGCTTTTTGTTTGGTGTGTAGGTTGTATCCACATTTATGCAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGGCTTTTTGTTTGGTGTGTAGGTTGTATCCACATTTATGCAGAAC  250

seq1  AGCTAGGATAAAATCAGAAATTTCTGAGAGGTATCCGATGGGGAGGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGATAAAATCAGAAATTTCTGAGAGGTATCCGATGGGGAGGAGTG  300

seq1  ACAGCTTTGTAGTTGCATTTATGTTAAACATCCCTGAAAGAAAACATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTGTAGTTGCATTTATGTTAAACATCCCTGAAAGAAAACATATC  350

seq1  TACAATAAGATAGGTATGCTATAGTTTATTAAGGTTTCTTAAAGTCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAAGATAGGTATGCTATAGTTTATTAAGGTTTCTTAAAGTCATAT  400

seq1  CTCATTTAACATACATGAAAGATGTCATGTGAATGTTCATTTACACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTAACATACATGAAAGATGTCATGTGAATGTTCATTTACACAGAA  450

seq1  ACCATGGTCCCCATGAAGGTAAATCCTGTTTTGTTTTTTGTTTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTCCCCATGAAGGTAAATCCTGTTTTGTTTTTTGTTTTTTGTTT  500

seq1  CTTTCTGGAAGAGCAATGTGAAGTGTGGTCACCTTTTTGGTGCTTGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGAAGAGCAATGTGAAGTGTGGTCACCTTTTTGGTGCTTGCACT  550

seq1  ATGGCGATTCTTTGTGATGGACTTTACAGAGTTTTACTTTGCCCCCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGATTCTTTGTGATGGACTTTACAGAGTTTTACTTTGCCCCCTAAA  600

seq1  TCATGTTCGCAAACTCTTTCCCTTATGTCATTATTTTGTGTATCTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCGCAAACTCTTTCCCTTATGTCATTATTTTGTGTATCTATTTT  650

seq1  CCCAAAGACCTAGATTCTGTTCAAGCATAGCTCTCTTTAAATTCCTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGACCTAGATTCTGTTCAAGCATAGCTCTCTTTAAATTCCTTCCC  700

seq1  TGTTAGGCAAAGTTCACACAATAGACTCGAGACCTCTCAGCTGGTGTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGCAAAGTTCACACAATAGACTCGAGACCTCTCAGCTGGTGTTTA  750

seq1  TGACTACATCAAGTAAGTCATGCCAATCAGAGTGAACTGTTTAATTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACATCAAGTAAGTCATGCCAATCAGAGTGAACTGTTTAATTAAAA  800

seq1  GGAAGGAGATTTTAAATGGAATCATCAC-TTGGAGTAAATAATTAAGATG  849
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  GGAAGGAGATTTTAAATGGAATCATCACTTTGGAGTAAATTATTAAGATG  850

seq1  GAAACTTCTGGTACATAAAAACGTTAAGCCACCTATATCTTCATGAATCT  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAAACTTCTGGTACATAAAAACGTT-AGCCACCTATATCTTCATGAATCT  899

seq1  TGCTTTCATTTTTCCCTGAACTCAGTTATGTTGAAAATATACTTACCATG  949
      |||||| ||||||||||| |||||||| ||||||||||||||||| ||||
seq2  TGCTTTTATTTTTCCCTG-ACTCAGTT-TGTTGAAAATATACTTA-CATG  946

seq1  ATTTTCCCAAATTAACGTTATAAAATCCCAGTGTTCAGCA-TTTTATGTG  998
      ||||||||||||||||||| |||||| ||||||||||||| |||||||||
seq2  ATTTTCCCAAATTAACGTTTTAAAAT-CCAGTGTTCAGCATTTTTATGTG  995

seq1  CATCTTCTCTATTTAAAAGTCTAAACAATATTTCTCTAAACCCAAGGAAT  1048
      ||||| ||||| ||||| |||| |||||||||||||| ||||||  ||| 
seq2  CATCTCCTCTA-TTAAAGGTCT-AACAATATTTCTCT-AACCCA--GAA-  1039

seq1  TGACATTGGAAACAACTTAAAGAATGTAAGGA--TATCATAGGATGCAAT  1096
      |||| ||||||||||||| |||||||||||||  ||||||| ||||||| 
seq2  TGAC-TTGGAAACAACTT-AAGAATGTAAGGAATTATCATA-GATGCAAA  1086

seq1  ATATCATACTATTATACATG  1116
       |||||| |||||| |||||
seq2  TTATCAT-CTATTA-ACATG  1104