BAC Information

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BAC

Clone NameB6Ng01-031L15
Chromosome3 (Build37)
Map Location 16,226,100 - 16,226,769
singlet/doubletsinglet
Overlap geneLOC100040034
Upstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3
Downstream geneLOC100040059, EG383936, LOC622737
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031L15.bB6Ng01-031L15.g
ACCDH861259DH861260
length9141,181
definitionDH861259|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L15, 5' end.DH861260|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagtacatattgtggctttggtctgatttgggaataaggtgcg
ctatgagggctggttagtcaatgatgggcaaccagatcccggatcatacc
aatctaagacaggggtacatgccaaaaggcagtggtcgttgatattacac
cacagagccatgtttatttgctgtatgtaacttgcgatgatggaattgga
tggttagagaagatctggtagttgaactctttattgctttttattaatat
taataacagggaggagatgtagcctcccataagcctgaaacaggctaagc
cagaacctgaccttgctgccactaaggagattatctaaggtggagccttc
ctctctagatcactctattgttctgccactgccactattcctcctcaaga
tactgctacctgctgagaggcccctagctattctggagattacgccctgt
tctgcctggcatcccctgcagctggttccaggctccaagaatgaaatggc
aggaatggaatccccccccctctcttttataaggcatgttccccgacatt
aaaatttgaaccttgatcagaaccctgtcttggttccattagtttccgtt
gcttagtttccctctttttcagctccggcctgctattcaggtgtaccagt
ccttgtgagccgctggacagctcacaacagttatgctgttttttttttca
gtttgcatatatggtggattacgctgacagattttcacatgttaaaaaat
accttcatcgctgagatgaagctaacttgatcttggtatattgacatgtt
cttgaatctggtttgcaaatgttttaatatgtattttcgaatatgttcat
gaggatgttggtgtgtacttatttgtttatgaatcttttttgttttgttt
gttttgtttggttt
gaattccgattactggaccaaggacatgctattttggaagaaaaactctg
tttttgtattgatagggaaggagaataaactctggcttccttctagagtg
atatggatcagatatgataggggagtaccacctgaagatctcaaaacatt
agaaaaatccaactagacaggtaaattgatctgttgattccttgacatag
gaacagttcagtaattgccctccttcatttggcatgaatgaagatttatt
acatttggttatccataagcttaactcataaaaagacagttgtctttcac
ctgctcctacaaagaagaatatttcatccttatctgatctgtgcaccctg
cacaatccatatgaaaatcttaatggtactaatactttgattgtgagatt
taaatgttacagaatgtacagatttggcagagatgctgaactgaactgct
tggcaccctgcttcctgatgcccataatcagggattgctgctgattccac
atcatcttgcctttcagacagatccagtcagaacttgagttaagccctga
gccttctaagcatacagaaaatggatagcagatgctaaagatagctttct
taagtctagcaggttttctaattttcctatcattctccacccatttaaag
agtttgaagtcacctcaatcagcaagaaaccatggagagaccttagccta
actccttatatttgggcgtctggttacagatattttatatactagatagg
ttgtcattttaagggataatttgggaatgatcataatcttgaacatggag
gaaatagatgggatggcacaatcttacattggtataaacctttgtaattg
atgtaaacttgaagtaataatttcattatatgggtacagaatttatatat
gatatagattagaggtttttattggtatgaattgatacaaatttaaatta
atattattatcttagaaagcactctggttatgcaattctttaatatattt
acatagatatcctcaaactcgaaatcacagtggactttaggttttcatat
atgatacgtgacatgagcaagttgctattcgaatcctcattcctcagtga
ttcaacttacttcaggtgagtgccatgaggcaagtacttgaggaattgac
tttttttatcgagaaatcttctcttaaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16226100_16226769
seq2: B6Ng01-031L15.b_46_641

seq1  GAATTCTAAGTACATATTGTGGCTTTGGTCTGATTTGGGCATAAGGTGCA  50
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  GAATTCTAAGTACATATTGTGGCTTTGGTCTGATTTGGGAATAAGGTGCG  50

seq1  CTATGAGGGCCGTTTAGTCAGTGATGGGCAACCAGATCCTGAATCACACC  100
      |||||||||| | ||||||| |||||||||||||||||| | |||| |||
seq2  CTATGAGGGCTGGTTAGTCAATGATGGGCAACCAGATCCCGGATCATACC  100

seq1  AATCTAAGACAGGGGTACATGCCAAAAGGCAGTGGTCATTGATATTACAC  150
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATCTAAGACAGGGGTACATGCCAAAAGGCAGTGGTCGTTGATATTACAC  150

seq1  CACAGAGCCATGCTTGTGTGAATTATAACACAAACTTGCTTCATGTAACT  200
      |||||||||||| ||                  | |||||  ||||||||
seq2  CACAGAGCCATGTTT------------------ATTTGCTGTATGTAACT  182

seq1  TCCGATGACGGAATTGGATGGTTAGAGTGGATCTGAGATCCTAAGGCAGG  250
      | |||||| ||||||||||||||||||  |||||                
seq2  TGCGATGATGGAATTGGATGGTTAGAGAAGATCT----------------  216

seq1  CACGGCAGGTAGCCACCATAATTCCCAGGCAGGACTATGGAGCATAAATA  300
             |||||         ||        | |||              
seq2  -------GGTAG---------TT--------GAACT--------------  228

seq1  AATTTTATGCCTTGGTCCAGCTTTTTATTAATATTAATAACAGGGAGGAG  350
         |||||           |||||||||||||||||||||||||||||||
seq2  --CTTTAT----------TGCTTTTTATTAATATTAATAACAGGGAGGAG  266

seq1  ATGTAGCCTCCCATAAGCTTGAAAGAGGCTAAGCCAGGACCTGACCTTGC  400
      |||||||||||||||||| ||||| |||||||||||| ||||||||||||
seq2  ATGTAGCCTCCCATAAGCCTGAAACAGGCTAAGCCAGAACCTGACCTTGC  316

seq1  TGCCACTAAGGAGATTATCTAGGATGGAGCCTTCCTCCCTAGAACACTCT  450
      ||||||||||||||||||||| | ||||||||||||| ||||| ||||||
seq2  TGCCACTAAGGAGATTATCTAAGGTGGAGCCTTCCTCTCTAGATCACTCT  366

seq1  ATTGTTCTGCCACTGCCGTTGTTCCTCTTCAAGATACTGCTACCTGCTGA  500
      |||||||||||||||||  | |||||| ||||||||||||||||||||||
seq2  ATTGTTCTGCCACTGCCACTATTCCTCCTCAAGATACTGCTACCTGCTGA  416

seq1  GAGGCCCCAGAACTATTCTGGAGATTACGCCCTATTCTGCACATCATCAC  550
      ||||||||  | ||||||||||||||||||||| ||||||    |||| |
seq2  GAGGCCCC-TAGCTATTCTGGAGATTACGCCCTGTTCTGCCTGGCATCCC  465

seq1  CTGCAGCTGGTTCCAAGCTCCAAGGATGAATTGGCGGGAATGGACTCCCC  600
      ||||||||||||||| |||||||| ||||| |||| |||||||| |||||
seq2  CTGCAGCTGGTTCCAGGCTCCAAGAATGAAATGGCAGGAATGGAATCCCC  515

seq1  C-----TTCTTTTATAAGGCATGTTCCCCAACA-------TTGAACCTTG  638
      |      |||||||||||||||||||||| |||       ||||||||||
seq2  CCCCCTCTCTTTTATAAGGCATGTTCCCCGACATTAAAATTTGAACCTTG  565

seq1  AGCAGACTAGTATGTCTTGGTTCCATTA-TTTC  670
      | ||||  |   |||||||||||||||| ||||
seq2  ATCAGA--ACCCTGTCTTGGTTCCATTAGTTTC  596