BAC Information

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BAC

Clone NameB6Ng01-032B12
Chromosome3 (Build37)
Map Location 134,054,701 - 134,181,438
singlet/doubletdoublet
Overlap genenone
Upstream geneE130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199, Cxxc4, Ppia-ps3_1390.1
Downstream geneLOC100039234, Tacr3, LOC229837, LOC100039290, EG620439, Cenpe, Bdh2, C80638, 4933425K02Rik, Zcd2, Ube2d3, Manba
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032B12.bB6Ng01-032B12.g
ACCDH861528DH861529
length744408
definitionDH861528|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B12, 5' end.DH861529|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,180,689 - 134,181,438)(134,054,701 - 134,055,114)
sequence
gaattcttccactactcagtgatgcttatgtgggctttagggcctgagag
ttcttatgagatataaagggaagatataaaaagaactacagaaaacgttg
ttgcttggaatcttcaaatcgtatatctttctcatttatttccaatgatt
taaatggcaagtaggtttaagaagaaataaaataccttttggcaaacacc
caaaagtaatttcaaaattgaagttttaaattactccctaatatacaagt
ttttcttttgtattttagaaagggcaagaaaacagattataaaattaact
gggggacacatgaatttcttagaaaccaactttaccaattttgttctaga
aattctgctacatattttaagatttaaattagcaaaagctacttataaac
ttcttggaaaaggattagatacttttgtcctttggagaaaatatgcacag
cagcaggttgcacacgtccttaatgaagctactcgacattttctgttcac
tgtggcatgtttacagacaaaaatatctgtcagatccttcagggttctgg
tcaacctggattaaggttctatttatatcagagcatatactcagtgggcc
ttccaagcaaatgtcatggaaagaaattctcagatctatgctgtcatttt
tcaactatttatccatcatacatttacacaaaataatttgctggtaagta
atgattttgttactagaatttggtgatgacttgatttgaagagt
tgtaagttggaatgagtgaatattctattagacacacatgaacctatgag
ggaggaaagtggtatggtttgggtacagaagtccttcagcaactcacatt
gaactcttggactctaggtatagtactattttgggaagttctaaaacttt
aggataatggtctgtctggttgatgggcttctgttatggcaggctcatag
gctgccctcttacaggctagctctctttttccttgcctgctcacatctaa
caagctgagtttcaagctctcacaatcatagacagtgcctacatactcct
aacatgtcagaatggatccctttaaaccatgagtctaattaacttctctg
ttaaaacagaaaagttctatgttggaagaggaagtggatgaggattagga
ggaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_134180689_134181438
seq2: B6Ng01-032B12.b_45_788 (reverse)

seq1  ACTCTTCAAATTCAAGTTCATCAACCAAATTCTAGTAACAAAAATCATTA  50
      |||||||||| ||||| ||||| |||||||||||||||| ||||||||||
seq2  ACTCTTCAAA-TCAAG-TCATC-ACCAAATTCTAGTAAC-AAAATCATTA  46

seq1  CTTACCAGCAAATTATTTTTGTGTAAATGTATGATGGATAAAATAGTTGA  100
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  CTTACCAGCAAATTA-TTTTGTGTAAATGTATGATGGAT-AAATAGTTGA  94

seq1  AAAATGACAGCATAGATCTGAGAATTTCTTTCCATGACATTTGCTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACAGCATAGATCTGAGAATTTCTTTCCATGACATTTGCTTGGAA  144

seq1  GGCCCACTGAGTATATGCTCTGATATAAATAGAACCTTAATCCAGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACTGAGTATATGCTCTGATATAAATAGAACCTTAATCCAGGTTGA  194

seq1  CCAGAACCCTGAAGGATCTGACAGATATTTTTGTCTGTAAACATGCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCCTGAAGGATCTGACAGATATTTTTGTCTGTAAACATGCCACA  244

seq1  GTGAACAGAAAATGTCGAGTAGCTTCATTAAGGACGTGTGCAACCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAGAAAATGTCGAGTAGCTTCATTAAGGACGTGTGCAACCTGCTG  294

seq1  CTGTGCATATTTTCTCCAAAGGACAAAAGTATCTAATCCTTTTCCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATATTTTCTCCAAAGGACAAAAGTATCTAATCCTTTTCCAAGAA  344

seq1  GTTTATAAGTAGCTTTTGCTAATTTAAATCTTAAAATATGTAGCAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAAGTAGCTTTTGCTAATTTAAATCTTAAAATATGTAGCAGAATT  394

seq1  TCTAGAACAAAATTGGTAAAGTTGGTTTCTAAGAAATTCATGTGTCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACAAAATTGGTAAAGTTGGTTTCTAAGAAATTCATGTGTCCCCC  444

seq1  AGTTAATTTTATAATCTGTTTTCTTGCCCTTTCTAAAATACAAAAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATTTTATAATCTGTTTTCTTGCCCTTTCTAAAATACAAAAGAAAA  494

seq1  ACTTGTATATTAGGGAGTAATTTAAAACTTCAATTTTGAAATTACTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTATATTAGGGAGTAATTTAAAACTTCAATTTTGAAATTACTTTTG  544

seq1  GGTGTTTGCCAAAAGGTATTTTATTTCTTCTTAAACCTACTTGCCATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGCCAAAAGGTATTTTATTTCTTCTTAAACCTACTTGCCATTTA  594

seq1  AATCATTGGAAATAAATGAGAAAGATATACGATTTGAAGATTCCAAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTGGAAATAAATGAGAAAGATATACGATTTGAAGATTCCAAGCAA  644

seq1  CAACGTTTTCTGTAGTTCTTTTTATATCTTCCCTTTATATCTCATAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTTTTCTGTAGTTCTTTTTATATCTTCCCTTTATATCTCATAAGAA  694

seq1  CTCTCAGGCCCTAAAGCCCACATAAGCATCACTGAGTAGTGGAAGAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGGCCCTAAAGCCCACATAAGCATCACTGAGTAGTGGAAGAATTC  744

seq1: chr3_134054701_134055114
seq2: B6Ng01-032B12.g_68_481

seq1  GAATTCTGTAAGTTGGAATGAGTGAATATTCTATTAGACACACATGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAGTTGGAATGAGTGAATATTCTATTAGACACACATGAACC  50

seq1  TATGAGGGAGGAAAGTGGTATGGTTTGGGTACAGAAGTCCTTCAGCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGGAGGAAAGTGGTATGGTTTGGGTACAGAAGTCCTTCAGCAACT  100

seq1  CACATTGAACTCTTGGACTCTAGGTATAGTACTATTTTGGGAAGTTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGAACTCTTGGACTCTAGGTATAGTACTATTTTGGGAAGTTCTAA  150

seq1  AACTTTAGGATAATGGTCTGTCTGGTTGATGGGCTTCTGTTATGGCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAGGATAATGGTCTGTCTGGTTGATGGGCTTCTGTTATGGCAGGC  200

seq1  TCATAGGCTGCCCTCTTACAGGCTAGCTCTCTTTTTCCTTGCCTGCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGCTGCCCTCTTACAGGCTAGCTCTCTTTTTCCTTGCCTGCTCAC  250

seq1  ATCTAACAAGCTGAGTTTCAAGCTCTCACAATCATAGACAGTGCCTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACAAGCTGAGTTTCAAGCTCTCACAATCATAGACAGTGCCTACAT  300

seq1  ACTCCTAACATGTCAGAATGGATCCCTTTAAACCATGAGTCTAATTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAACATGTCAGAATGGATCCCTTTAAACCATGAGTCTAATTAACT  350

seq1  TCTCTGTTAAAACAGAAAAGTTCTATGTTGGAAGAGGAAGTGGATGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTAAAACAGAAAAGTTCTATGTTGGAAGAGGAAGTGGATGAGGA  400

seq1  TTAGGAGGAAGAGA  414
      ||||||||||||||
seq2  TTAGGAGGAAGAGA  414