BAC Information

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BAC

Clone NameB6Ng01-032E02
Chromosome3 (Build37)
Map Location 76,442,104 - 76,589,684
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneSerpini1, Golph4
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E02.bB6Ng01-032E02.g
ACCDH861645DH861646
length1,0861,011
definitionDH861645|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E02, 5' end.DH861646|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,442,104 - 76,443,207)(76,588,684 - 76,589,684)
sequence
gaattcagtcttataaaaatccagatgagtaaatgagtaatattctaatt
tgttcagtaaaaatagccaataacagagtttcagaagtgtgttccactgg
gttctgtatgtgccatgcttatgatccagcagaaactgttccacgcaacc
aaatctctccaaatagttctgggaaatgaaaacaaagtttatgtgaaatg
tgtagactagtgtaatttcatgaagtacaattcccagagaaaattccatc
tgaaaataataggtgagttgtactgattacttgaacaatacaaacatgat
tttctttaatcttcacaatgactctttttgatggaaaacattattatatg
cattttactaaagaggtaatcagggcttatgaaaagtgttccaaaactaa
tataagggtgctgctgagtgttacacctgggaatcattagactcatggtt
gattgtgctccccttttccagccctggcttctgactgcacagagccctca
ggatttttattaggttaaaaggaaggatttccaccctgtagtttgcgtgc
ttttgctatttgaaaatcaaaatcctattctaagacagcattctggtgta
gtcccaattcaagtaaaaacagattgtaagttgtaagtgcaaattttctg
gctgacattgacataaattaaacctctaatagaatgtgaaaaattcattt
gattccatttctggtatgggtggaatgcaatattgcctaggttataagca
atgattctactcagaagacagacaaaaacttttttttttcagtttctcct
tgtattttaggaaaaacaagtgtgttatccttgcaggctcagtggtagag
cccttacctaatgcaagcaaatcattgagttttaattcacagcaagaaag
aagaaaataaaatgtttttggttctaaattgttaatgccctacattgaat
atattttcacttattatacaagcaaatttaaaagacatatactagagtat
atagctcagatatatatgtaatatatgatataatatcttatacataattt
atatgtaccattctaaagatcataagattcatgata
gaattcactgaaacccttaggaacaaattttccaacatcttcagtgctgg
tcctgtttgactaagactctaaggaggatagaatgattatctgggtgaga
agttggattattattttagaatgtgattgtaaaacactgtttaaaaaatt
aagcactgcaatttggctatctaaatttaattatgagatatacttttaaa
taaagtatatttttaataaaagcatgtgaatatgctatgttttgtggact
aaattaattgcaggcaagcaagacacatatgatggggagaacaagaagaa
gaaagttccacaaatagaggaacttgattctttgtctatcctacagaaat
gtaagaagatgaaaatgaatgggatggatctacacatgggtagtttgaca
atgtggtaacatttgagaggtagaacttggtagcccctttctaccttgtg
tgaattgtgaattgtaatcctcattagaattaatagaccacacctgtctc
ataatgaaaaccatttgctatagcttagcatctctgtatgtttttcccag
tctctacttcatttcttctcatttatacagaactttcttcttcctttttc
tttatgtatcacattattctttctattttatttatctatcttttcttttt
tttttctatttatttatttgtttgagacagggattctctgtacagtccag
gctgtcctggaacttactttgcagtaagtttgcctcgaactcagaaatct
gcctgcctctgcctcccaagtgctgggattaaaggtgtgcaccaccacct
cccagctttatctatctttttctttgagacagagtctctctaaatagtta
attgtggttctggaactatgttgaccaggcttttcttgaatttacaaggt
ataatcacctctgctcccatagtcatgatatcaaaggcttgtagcatcat
gcccagctatatcttctatattttaaaatttattttttttatgttattta
atactataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76442104_76443207
seq2: B6Ng01-032E02.b_47_1132

seq1  GAATTCAGTCTTATAAAAATCCAGATGAGTAAATGAGTAATATTCTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTTATAAAAATCCAGATGAGTAAATGAGTAATATTCTAATT  50

seq1  TGTTCAGTAAAAATAGCCAATAACAGAGTTTCAGAAGTGTGTTCCACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTAAAAATAGCCAATAACAGAGTTTCAGAAGTGTGTTCCACTGG  100

seq1  GTTCTGTATGTGCCATGCTTATGATCCAGCAGAAACTGTTCCACGCAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTATGTGCCATGCTTATGATCCAGCAGAAACTGTTCCACGCAACC  150

seq1  AAATCTCTCCAAATAGTTCTGGGAAATGAAAACAAAGTTTATGTGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTCCAAATAGTTCTGGGAAATGAAAACAAAGTTTATGTGAAATG  200

seq1  TGTAGACTAGTGTAATTTCATGAAGTACAATTCCCAGAGAAAATTCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACTAGTGTAATTTCATGAAGTACAATTCCCAGAGAAAATTCCATC  250

seq1  TGAAAATAATAGGTGAGTTGTACTGATTACTTGAACAATACAAACATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAATAGGTGAGTTGTACTGATTACTTGAACAATACAAACATGAT  300

seq1  TTTCTTTAATCTTCACAATGACTCTTTTTGATGGAAAACATTATTATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAATCTTCACAATGACTCTTTTTGATGGAAAACATTATTATATG  350

seq1  CATTTTACTAAAGAGGTAATCAGGGCTTATGAAAAGTGTTCCAAAACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACTAAAGAGGTAATCAGGGCTTATGAAAAGTGTTCCAAAACTAA  400

seq1  TATAAGGGTGCTGCTGAGTGTTACACCTGGGAATCATTAGACTCATGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGGTGCTGCTGAGTGTTACACCTGGGAATCATTAGACTCATGGTT  450

seq1  GATTGTGCTCCCCTTTTCCAGCCCTGGCTTCTGACTGCACAGAGCCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGCTCCCCTTTTCCAGCCCTGGCTTCTGACTGCACAGAGCCCTCA  500

seq1  GGATTTTTATTAGGTTAAAAGGAAGGATTTCCACCCTGTAGTTTGCGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTATTAGGTTAAAAGGAAGGATTTCCACCCTGTAGTTTGCGTGC  550

seq1  TTTTGCTATTTGAAAATCAAAATCCTATTCTAAGACAGCATTCTGGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTATTTGAAAATCAAAATCCTATTCTAAGACAGCATTCTGGTGTA  600

seq1  GTCCCAATTCAAGTAAAAACAGATTGTAAGTTGTAAGTGCAAATTTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAATTCAAGTAAAAACAGATTGTAAGTTGTAAGTGCAAATTTTCTG  650

seq1  GCTGACATTGACATAAATTAAACCTCTAATAGAATGTGAAAAATTCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACATTGACATAAATTAAACCTCTAATAGAATGTGAAAAATTCATTT  700

seq1  GATTCCATTTCTGGTATGGGTGGAATGCAATATTGCCTAGGTTATAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCATTTCTGGTATGGGTGGAATGCAATATTGCCTAGGTTATAAGCA  750

seq1  ATGATTCTACTCAGAAGACAGACAAAAAC-TTTTTTTTTCAGTTTCTCCT  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGATTCTACTCAGAAGACAGACAAAAACTTTTTTTTTTCAGTTTCTCCT  800

seq1  TGTATTTTAGGAAAAACAAGTGTGTTATCCTTGCAGGCTCAGTGGTAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTAGGAAAAACAAGTGTGTTATCCTTGCAGGCTCAGTGGTAGAG  850

seq1  CCCTTACCTAATGCAAGCAAATCATTGAGTTTTAATTCACAGCAAAGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCTTACCTAATGCAAGCAAATCATTGAGTTTTAATTCACAGC-AAGAAA  899

seq1  GAAGAAAAATAAAATGTTTTTGGTTCTAAATTGTTTAATGCCCTACATTG  949
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAAG-AAAATAAAATGTTTTTGGTTCTAAATTG-TTAATGCCCTACATTG  947

seq1  AATATAATTTTCACTTATTATACAAAGCAAAATTTAAAAAGACATTATAA  999
      ||||| ||||||||||||||||| |||||||  || |||||||| ||| |
seq2  AATAT-ATTTTCACTTATTATAC-AAGCAAA--TTTAAAAGACA-TAT-A  991

seq1  CTAGAGTATAAATAGCTCAGATATATATGTAATATATGATATATATATCT  1049
      |||||||||  |||||||||||||||||||||||||||||||| ||||||
seq2  CTAGAGTAT--ATAGCTCAGATATATATGTAATATATGATATA-ATATCT  1038

seq1  TATACATAATTTTATATGTACACATTCCTAAAAGATCATAAAAGATTTCA  1099
      ||||||||| ||||||||||| |||||   ||||||||||| |   ||||
seq2  TATACATAA-TTTATATGTAC-CATTC--TAAAGATCATAAGA---TTCA  1081

seq1  TGATA  1104
      |||||
seq2  TGATA  1086

seq1: chr3_76588684_76589684
seq2: B6Ng01-032E02.g_65_1067 (reverse)

seq1  TATTAAATAACATAAAATAAAATAATTTTAAAATATAGAGAATATAGCTG  50
      ||||||||||||||||| |||  ||||||||||||||||  |||||||||
seq2  TATTAAATAACATAAAAAAAATAAATTTTAAAATATAGAAGATATAGCTG  50

seq1  GGCATGATGCTACAAGCCTTTGATATCATGACTATGGGAGCAGAGGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGATGCTACAAGCCTTTGATATCATGACTATGGGAGCAGAGGTGAT  100

seq1  TATACCTTTGTAAATTCAAGAAAAGCCTGGTCAACATAGTTCCAGAACAA  150
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  TATACC-TTGTAAATTCAAGAAAAGCCTGGTCAACATAGTTCCAGAACCA  149

seq1  CAA-TAACTATTTAGAGAGACTCTGTCTCAAAG-AAAAGATAGAT-AAGC  197
      ||| ||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  CAATTAACTATTTAGAGAGACTCTGTCTCAAAGAAAAAGATAGATAAAGC  199

seq1  TGGGAGGTGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTGGTGGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGC  249

seq1  AGGCAGATTTCTGAGTTCGAGGCAAACTTACTGCAAAGTAAGTTCCAGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATTTCTGAGTTCGAGGCAAACTTACTGCAAAGTAAGTTCCAGGA  299

seq1  CAGCCTGGACTGTACAGAGAATCCCTGTCTCAAACAAATAAATAAATAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGACTGTACAGAGAATCCCTGTCTCAAACAAATAAATAAATAGA  349

seq1  AAAAAAAAAGAAAAGATAGATAAATAAAATAGAAAGAATAATGTGATACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGAAAAGATAGATAAATAAAATAGAAAGAATAATGTGATACA  399

seq1  TAAAGAAAAAGGAAGAAGAAAGTTCTGTATAAATGAGAAGAAATGAAGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAAGGAAGAAGAAAGTTCTGTATAAATGAGAAGAAATGAAGTA  449

seq1  GAGACTGGGAAAAACATACAGAGATGCTAAGCTATAGCAAATGGTTTTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGGGAAAAACATACAGAGATGCTAAGCTATAGCAAATGGTTTTCA  499

seq1  TTATGAGACAGGTGTGGTCTATTAATTCTAATGAGGATTACAATTCACAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGACAGGTGTGGTCTATTAATTCTAATGAGGATTACAATTCACAA  549

seq1  TTCACACAAGGTAGAAAGGGGCTACCAAGTTCTACCTCTCAAATGTTACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAAGGTAGAAAGGGGCTACCAAGTTCTACCTCTCAAATGTTACC  599

seq1  ACATTGTCAAACTACCCATGTGTAGATCCATCCCATTCATTTTCATCTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTCAAACTACCCATGTGTAGATCCATCCCATTCATTTTCATCTTC  649

seq1  TTACATTTCTGTAGGATAGACAAAGAATCAAGTTCCTCTATTTGTGGAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCTGTAGGATAGACAAAGAATCAAGTTCCTCTATTTGTGGAAC  699

seq1  TTTCTTCTTCTTGTTCTCCCCATCATATGTGTCTTGCTTGCCTGCAATTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTTCTTGTTCTCCCCATCATATGTGTCTTGCTTGCCTGCAATTA  749

seq1  ATTTAGTCCACAAAACATAGCATATTCACATGCTTTTATTAAAAATATAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTCCACAAAACATAGCATATTCACATGCTTTTATTAAAAATATAC  799

seq1  TTTATTTAAAAGTATATCTCATAATTAAATTTAGATAGCCAAATTGCAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAAAGTATATCTCATAATTAAATTTAGATAGCCAAATTGCAGT  849

seq1  GCTTAATTTTTTAAACAGTGTTTTACAATCACATTCTAAAATAATAATCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTTTTTAAACAGTGTTTTACAATCACATTCTAAAATAATAATCC  899

seq1  AACTTCTCACCCAGATAATCATTCTATCCTCCTTAGAGTCTTAGTCAAAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTCACCCAGATAATCATTCTATCCTCCTTAGAGTCTTAGTCAAAC  949

seq1  AGGACCAGCACTGAAGATGTTGGAAAATTTGTTCCTAAGGGTTTCAGTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGCACTGAAGATGTTGGAAAATTTGTTCCTAAGGGTTTCAGTGA  999

seq1  ATTC  1001
      ||||
seq2  ATTC  1003