BAC Information

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BAC

Clone NameB6Ng01-032F21
Chromosome3 (Build37)
Map Location 76,644,301 - 76,769,565
singlet/doubletdoublet
Overlap geneLOC100041625
Upstream geneGolph4, Fstl5
Downstream geneLOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032F21.bB6Ng01-032F21.g
ACCDH861727DH861728
length1,1461,081
definitionDH861727|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F21, 5' end.DH861728|Mus musculus domesticus DNA, BAC clone: B6Ng01-032F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,768,413 - 76,769,565)(76,644,301 - 76,645,397)
sequence
gaattctctgtggtttcaaaatcaataccaatagatgatcccagttttac
tttgatctgctgccctcaggtattaaaaaaaaatccccatatttaaaatt
ctggtaggtgcagaaacacaggaaaatctatttattaaaatttgagaaaa
ttcaaatattagacaaatccttatttttaatattattggaattatctcaa
gcattgtaaaaatttataaattattactagtatggagaaaaggatcaatg
ctttctgaatagacagttatcttttaagaaatattttaaaatgtagatgg
agagaattaacagtttaaacaaaattatacagatgggaaattgtaaggca
gggaaattgcaaaaggttatctgaaaacaaagagcattcattatgtccct
agataatatagaaccaacttaatacatttgaggcttttttgtaatttctt
tttattttcatttgctgttattttcacaatatactgcatttgcatgattc
ataataaaacaataggacatgtaaattaagaaaaataactttcacgcatt
tctatatctaatatttctgccacagataattttttctcctcttcaataaa
atcgtgtctggttccttctaacaaatgtatttgtactctctcaaatggtt
taaaatccattcctttttagctgattatgaaaagcagttgaaatgctgat
atagtatttgttcgtacatttctttcctgatgtaccctaattttgctcct
gtctggaatgattttctttcacacagctcctgtatctttttgttagactg
tgcaataacttcaatgggtttctttttcaccttagtggttgttcattgtc
ccattttagagcaagagttctagattctgagagttctagattctgctggg
tttctaaaacaatgatagtcattattcttggataaaaatcacaacttcac
tcattattgatagaaataaactgattgtaactttattcaatgatctcata
ggcagcatcatatattgccattacatggagacaagaggtccaggttccca
ggactcatttttaatggctaacctatgaagaaggtacacgccctcaagct
gggaagctaagaacatcctcattacggtgtttgattggatgactat
gaattcaaaatattaatcataacagttttattttatgtggtttctattaa
tccattttatggaatagagtagttaaaaattcatggtttgagggaaatga
tttatttggtgaattttgacaacaaatgaaactcctagtgttaaatgact
gtgtgaccctggggtttagaatcaagtctctcctcacgttgaattctgtc
agctctgtttctctgctattctctgttattctcaatatcgcctttctatt
ccctagttatgaaatagtgttaattatcagtcatatcacatattctcttt
aaatttataaagtatcatgtaactgatgttctcattggagatttaaaaaa
aaaagacaaaaccatattacaagatgttggtaccatgaaagatagcagag
ataatgtgttgaataggttgaaatgtatacaggccctacctcttcacatc
ccagtcaacaacacatagcataccaaacagtggtcccatgtaaatgatat
gctcttataacatactgtgatattcaaaatgacaaaagcactgtactttt
ggaatgaactcccatcatcatgcaatatatgaataacacactttgctttt
atcaaggcatctgagaagggtattaacatcacacatataactgttgcttt
cttccatgtacctgaaatgccacatttccaagttcaccgagttaaaaaga
aaaagaaaagagaaaaaaaagaagaaaaaagaaaaaaaaaaaaaccaaca
actgggccttaaatctaggtcacttatttttaatttacatcacatctcat
tttcaaatgaatcacagtgacaaattatacagcatctgcttttggaagtt
agtgcagggaggctattcactataaaactcgcaagtagtacatcagaagc
actggtctttgagaatagagaaagtgatttttgtgatgcatttacaccat
ttgtgctacatttattctcagtgcactggctttgtatgagcaggaaagaa
gatttgtttgggataatagtccagagtgcctataagatttattcaaggtt
ttgtttactgaatgttccagttgggagtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76768413_76769565
seq2: B6Ng01-032F21.b_47_1192 (reverse)

seq1  ATAGTCATCCATACAAACACCCCTTAATGA-GATGTTCTCTAGCTTTCCC  49
      |||||||||||  ||||||  || |||||| |||||||| |||| |||||
seq2  ATAGTCATCCAATCAAACA--CCGTAATGAGGATGTTCT-TAGC-TTCCC  46

seq1  AGCTTGAGGGCGTGTACCTTTCTTCATAGGTTAGGCCAATAGAAATGAGT  99
      |||||||||||||||||| |||||||||||||| |||| || ||||||||
seq2  AGCTTGAGGGCGTGTACC-TTCTTCATAGGTTA-GCCATTAAAAATGAGT  94

seq1  CCTGGGAACCTGGACCTTCTGTCTCCATGTAATTGGCAATAATATGATGC  149
      |||||||||||||||||  ||||||||||||| ||||||| |||||||||
seq2  CCTGGGAACCTGGACCTCTTGTCTCCATGTAA-TGGCAAT-ATATGATGC  142

seq1  TGCCTATGAGATCATTGAATAAAGTTACAATCAGTTTATTTCTATCAATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATGAGATCATTGAATAAAGTTACAATCAGTTTATTTCTATCAATA  192

seq1  ATGAGTGAAGTTGTGATTTTTATCCAAGAATAATGACTATCATTGTTTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGAAGTTGTGATTTTTATCCAAGAATAATGACTATCATTGTTTTA  242

seq1  GAAACCCAGCAGAATCTAGAACTCTCAGAATCTAGAACTCTTGCTCTAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCAGCAGAATCTAGAACTCTCAGAATCTAGAACTCTTGCTCTAAA  292

seq1  ATGGGACAATGAACAACCACTAAGGTGAAAAAGAAACCCATTGAAGTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACAATGAACAACCACTAAGGTGAAAAAGAAACCCATTGAAGTTAT  342

seq1  TGCACAGTCTAACAAAAAGATACAGGAGCTGTGTGAAAGAAAATCATTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTCTAACAAAAAGATACAGGAGCTGTGTGAAAGAAAATCATTCC  392

seq1  AGACAGGAGCAAAATTAGGGTACATCAGGAAAGAAATGTACGAACAAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGCAAAATTAGGGTACATCAGGAAAGAAATGTACGAACAAATA  442

seq1  CTATATCAGCATTTCAACTGCTTTTCATAATCAGCTAAAAAGGAATGGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAGCATTTCAACTGCTTTTCATAATCAGCTAAAAAGGAATGGAT  492

seq1  TTTAAACCATTTGAGAGAGTACAAATACATTTGTTAGAAGGAACCAGACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCATTTGAGAGAGTACAAATACATTTGTTAGAAGGAACCAGACA  542

seq1  CGATTTTATTGAAGAGGAGAAAAAATTATCTGTGGCAGAAATATTAGATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTTATTGAAGAGGAGAAAAAATTATCTGTGGCAGAAATATTAGATA  592

seq1  TAGAAATGCGTGAAAGTTATTTTTCTTAATTTACATGTCCTATTGTTTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGCGTGAAAGTTATTTTTCTTAATTTACATGTCCTATTGTTTTA  642

seq1  TTATGAATCATGCAAATGCAGTATATTGTGAAAATAACAGCAAATGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATCATGCAAATGCAGTATATTGTGAAAATAACAGCAAATGAAAA  692

seq1  TAAAAAGAAATTACAAAAAAGCCTCAAATGTATTAAGTTGGTTCTATATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAATTACAAAAAAGCCTCAAATGTATTAAGTTGGTTCTATATT  742

seq1  ATCTAGGGACATAATGAATGCTCTTTGTTTTCAGATAACCTTTTGCAATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGGACATAATGAATGCTCTTTGTTTTCAGATAACCTTTTGCAATT  792

seq1  TCCCTGCCTTACAATTTCCCATCTGTATAATTTTGTTTAAACTGTTAATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCCTTACAATTTCCCATCTGTATAATTTTGTTTAAACTGTTAATT  842

seq1  CTCTCCATCTACATTTTAAAATATTTCTTAAAAGATAACTGTCTATTCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATCTACATTTTAAAATATTTCTTAAAAGATAACTGTCTATTCAG  892

seq1  AAAGCATTGATCCTTTTCTCCATACTAGTAATAATTTATAAATTTTTACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTGATCCTTTTCTCCATACTAGTAATAATTTATAAATTTTTACA  942

seq1  ATGCTTGAGATAATTCCAATAATATTAAAAATAAGGATTTGTCTAATATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGAGATAATTCCAATAATATTAAAAATAAGGATTTGTCTAATATT  992

seq1  TGAATTTTCTCAAATTTTAATAAATAGATTTTCCTGTGTTTCTGCACCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTCTCAAATTTTAATAAATAGATTTTCCTGTGTTTCTGCACCTA  1042

seq1  CCAGAATTTTAAATATGGGGATTTTTTTTTAATACCTGAGGGCAGCAGAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTTTAAATATGGGGATTTTTTTTTAATACCTGAGGGCAGCAGAT  1092

seq1  CAAAGTAAAACTGGGATCATCTATTGGTATTGATTTTGAAACCACAGAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAAAACTGGGATCATCTATTGGTATTGATTTTGAAACCACAGAGA  1142

seq1  ATTC  1153
      ||||
seq2  ATTC  1146

seq1: chr3_76644301_76645397
seq2: B6Ng01-032F21.g_67_1147

seq1  GAATTCAAAATATTAATCATAACAGTTTTATTTTATGTGGTTTCTATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATATTAATCATAACAGTTTTATTTTATGTGGTTTCTATTAA  50

seq1  TCCATTTTATGGAATAGAGTAGTTAAAAATTCATGGTTTGAGGGAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTATGGAATAGAGTAGTTAAAAATTCATGGTTTGAGGGAAATGA  100

seq1  TTTATTTGGTGAATTTTGACAACAAATGAAACTCCTAGTGTTAAATGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGGTGAATTTTGACAACAAATGAAACTCCTAGTGTTAAATGACT  150

seq1  GTGTGACCCTGGGGTTTAGAATCAAGTCTCTCCTCACGTTGAATTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCCTGGGGTTTAGAATCAAGTCTCTCCTCACGTTGAATTCTGTC  200

seq1  AGCTCTGTTTCTCTGCTATTCTCTGTTATTCTCAATATCGCCTTTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTTTCTCTGCTATTCTCTGTTATTCTCAATATCGCCTTTCTATT  250

seq1  CCCTAGTTATGAAATAGTGTTAATTATCAGTCATATCACATATTCTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTTATGAAATAGTGTTAATTATCAGTCATATCACATATTCTCTTT  300

seq1  AAATTTATAAAGTATCATGTAACTGATGTTCTCATTGGAGATTTAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATAAAGTATCATGTAACTGATGTTCTCATTGGAGATTTAAAAAA  350

seq1  AAAAGACAAAACCATATTACAAGATGTTGGTACCATGAAAGATAGCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAAAACCATATTACAAGATGTTGGTACCATGAAAGATAGCAGAG  400

seq1  ATAATGTGTTGAATAGGTTGAAATGTATACAGGCCCTACCTCTTCACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGTTGAATAGGTTGAAATGTATACAGGCCCTACCTCTTCACATC  450

seq1  CCAGTCAACAACACATAGCATACCAAACAGTGGTCCCATGTAAATGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAACAACACATAGCATACCAAACAGTGGTCCCATGTAAATGATAT  500

seq1  GCTCTTATAACATACTGTGATATTCAAAATGACAAAAGCACTGTACTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTATAACATACTGTGATATTCAAAATGACAAAAGCACTGTACTTTT  550

seq1  GGAATGAACTCCCATCATCATGCAATATATGAATAACACACTTTGCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAACTCCCATCATCATGCAATATATGAATAACACACTTTGCTTTT  600

seq1  ATCAAGGCATCTGAGAAGGGTATTAACATCACACATATAACTGTTGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGCATCTGAGAAGGGTATTAACATCACACATATAACTGTTGCTTT  650

seq1  CTTCCATGTACCTGAAATGCCACATTTCCAAGTTCACCGAGTTAAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGTACCTGAAATGCCACATTTCCAAGTTCACCGAGTTAAAAAGA  700

seq1  AAAAGAAAAGAGAAAAAAAAGAAGAAAAAAGAAAAAAAAAAAAACCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAGAAAAAAAAGAAGAAAAAAGAAAAAAAAAAAAACCAACA  750

seq1  ACTGGGCCTTAAATCTAGGTCACTTA-TTTTAATTTACATCACATCTCAT  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTGGGCCTTAAATCTAGGTCACTTATTTTTAATTTACATCACATCTCAT  800

seq1  TTTCAAATGAATCACAGTGACAAATTATACAGCATCTGCTTTT-GAAGTT  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTCAAATGAATCACAGTGACAAATTATACAGCATCTGCTTTTGGAAGTT  850

seq1  AGTGCAGGGAGGCTATTCACTATAAAACTCGCAAGTAGTACATCAGAGCC  898
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  AGTGCAGGGAGGCTATTCACTATAAAACTCGCAAGTAGTACATCAGAAGC  900

seq1  ACTGGTCTTTGAGAATAGAGAAAGTGTATTTTTGTGATGCATTTACAACC  948
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  ACTGGTCTTTGAGAATAGAGAAAGTG-ATTTTTGTGATGCATTTAC-ACC  948

seq1  ATTTGTGCTACAATTTATTCTCAGTGCACTGGCTTTGTATGAGCAAGGGA  998
      ||||||||||| |||||||||||||||||||||||||||||||||   | 
seq2  ATTTGTGCTAC-ATTTATTCTCAGTGCACTGGCTTTGTATGAGCA---GG  994

seq1  AAAGAAGATTTGTTTTGGATAATAGTCCAGAAGTGCCTATAAGATTTTAT  1048
      ||||||||||||||| |||||||||||||| ||||||||||||||||   
seq2  AAAGAAGATTTGTTTGGGATAATAGTCCAG-AGTGCCTATAAGATTT--A  1041

seq1  TTCAAGGGTTTTTGTTTTACTGAGATGTTTTCAAGTCTTTGGGAGTCTC  1097
      |||||||  ||||| |||||||| |||  ||| ||   |||||||||||
seq2  TTCAAGG--TTTTG-TTTACTGA-ATG--TTCCAG---TTGGGAGTCTC  1081