BAC Information

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BAC

Clone NameB6Ng01-032G16
Chromosome3 (Build37)
Map Location 145,083,591 - 145,229,325
singlet/doubletdoublet
Overlap geneCol24a1
Upstream geneLOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l
Downstream gene2410019A14Rik, Cyr61, Ddah1, LOC100040331, Bcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7, Ssx2ip, Ctbs, Spata1, Gng5, Bxdc5, LOC100040473
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G16.bB6Ng01-032G16.g
ACCDH861761DH861762
length70257
definitionDH861761|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G16, 5' end.DH861762|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,083,591 - 145,084,293)(145,229,269 - 145,229,325)
sequence
gaattcttgtggctggggagatggctcagcagttaagagcactggctctt
cttccagaggatcaagatggagtaatccccagcacagacacggtggctca
caactgtctatgactcagttccggggatctgaaagcctcctctggcctct
gcagccacaaggaatgtacatagtgcacagttatacattcaggcaaaaca
cccacacataaaaacaaacaagcagataaataagtaagggattcttggac
tgtggagatggctgagttggtaaagtcctggtcccacaaggagaaagacc
tgtgtttggatctcaaacaggcaacacagaaaggggcaggtgcagtagag
catgtctttagccttagctctgataggaaggaaatgaaattccccagagc
cgtttggccagccaatttaaccaatcagtgaccaccatgtgtctcataag
caaaggtagagggaaagaaaggaaaacaccaagccccaacctcttgcctc
tacattcacatggacatgagtccctgcatatacacttgcgtgtgcgtgtg
cacacacgaaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagagaggggggaggaagaaaga
agggaagagaagagaagaaaagagaggagaggagaggagaggagaggaga
gg
ttttttcccagtatttttatttatttatctattgagagagtggggagggg
gaagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_145083591_145084293
seq2: B6Ng01-032G16.b_43_744

seq1  GAATTCTTGTGGCTGGGGAGATGGCTCAGCAGTTAAGAGCACTGGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGGCTGGGGAGATGGCTCAGCAGTTAAGAGCACTGGCTCTT  50

seq1  CTTCCAGAGGATCAAGATGGAGTAATCCCCAGCACAGACACGGTGGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGGATCAAGATGGAGTAATCCCCAGCACAGACACGGTGGCTCA  100

seq1  CAACTGTCTATGACTCAGTTCCGGGGATCTGAAAGCCTCCTCTGGCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTCTATGACTCAGTTCCGGGGATCTGAAAGCCTCCTCTGGCCTCT  150

seq1  GCAGCCACAAGGAATGTACATAGTGCACAGTTATACATTCAGGCAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCACAAGGAATGTACATAGTGCACAGTTATACATTCAGGCAAAACA  200

seq1  CCCACACATAAAAACAAACAAGCAGATAAATAAGTAAGGGATTCTTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACATAAAAACAAACAAGCAGATAAATAAGTAAGGGATTCTTGGAC  250

seq1  TGTGGAGATGGCTGAGTTGGTAAAGTCCTGGTCCCACAAGGAGAAAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGATGGCTGAGTTGGTAAAGTCCTGGTCCCACAAGGAGAAAGACC  300

seq1  TGTGTTTGGATCTCAAACAGGCAACACAGAAAGGGGCAGGTGCAGTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGGATCTCAAACAGGCAACACAGAAAGGGGCAGGTGCAGTAGAG  350

seq1  CATGTCTTTAGCCTTAGCTCTGATAGGAAGGAAATGAAATTCCCCAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTTAGCCTTAGCTCTGATAGGAAGGAAATGAAATTCCCCAGAGC  400

seq1  CGTTTGGCCAGCCAATTTAACCAATCAGTGACCACCATGTGTCTCATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGGCCAGCCAATTTAACCAATCAGTGACCACCATGTGTCTCATAAG  450

seq1  CAAAGGTAGAGGGAAAGAAAGGAAAACACCAAGCCCCAACCTCTTGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTAGAGGGAAAGAAAGGAAAACACCAAGCCCCAACCTCTTGCCTC  500

seq1  TACATTCACATGGACATGAGTCCCTGCATATACACTTGCGTGTGCGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCACATGGACATGAGTCCCTGCATATACACTTGCGTGTGCGTGTG  550

seq1  CACACACGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACGAAAGAAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  600

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGGGGGAGGAAGAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGGGGGGAGGAAG-AAAG  649

seq1  AAGGGAAGAGAAGAGAAGAAAAGAGAGGAGAGGAGAGGAGAGGAGAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGAGAAGAGAAGAAAAGAGAGGAGAGGAGAGGAGAGGAGAGGAG  699

seq1  AGG  703
      |||
seq2  AGG  702

seq1: chr3_145229269_145229325
seq2: B6Ng01-032G16.g_74_130 (reverse)

seq1  CCCCTTCCCCCTCCCCACTCTCTCAATAGATAAATAAATAAAAATACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCCCCTCCCCACTCTCTCAATAGATAAATAAATAAAAATACTGG  50

seq1  GAAAAAA  57
      |||||||
seq2  GAAAAAA  57