BAC Information

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BAC

Clone NameB6Ng01-032L03
Chromosome3 (Build37)
Map Location 98,777,521 - 98,778,635
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh, Zfp697, LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5, LOC668543, Hsd3b2, Hsd3b3, Hsd3b6, LOC545556, Hsd3b1, Hao3
Downstream geneLOC668557, Wars2, Tbx15, M6pr-ps, Spag17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032L03.bB6Ng01-032L03.g
ACCDH861950DH861951
length1,1071,035
definitionDH861950|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L03, 5' end.DH861951|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaatctaacacttttttggagtcaggatcccctgaagcccac
acttcccctgaaccttatacagagcaaaagataacattgaatgtcatctt
ccaagtactgctattacaaacctatgctcaattttatgcagttctaatga
tcaagactagaactttatacaatctagacagaccctctgccaactgagtg
acatctccaaccccgacacttgtctttgcaaacatgacagcggacaatga
atggctgagttaaagaactcccctttcagagttaaagttccagaaacccc
ctagttcctcttaagaagcccatttcatttccttcatctgagaagcacat
agttagacatcattcactcttcatattcccaagagagcttttatggggga
gaaatggagaggggtgacaaggagactgctactgtgtttgaatcttgctt
cccacactctttctttcactgaccagctttttaaccctgagcaagtcact
taaatcatttccctaagatcccaggcctgatcccagtggctgttccaatt
ccctggcttctatgaagcccaaacttatcaccacaaggattcagactcaa
cattcaacagcttatagtagctaattctgctccactcctaaacatttccg
ttcctgtgtccttatacaatcattaaacctataggcacaacatcatttac
ctgggtcatgtctcctactataaaagttttacagaataggtcatttgggg
catctagttgtcatggagtaacgatgagatggattagccttgtgccaccc
ccattcaccatcttctctctccacccttactctcatccccaccctcagtg
tgcagcagcatccttccagtttctctacttcatgattctcatgaatgttt
ttcccttagtctgggatgtattcccactcgagtccctttgtatggtcact
tgctcacatcgtctccctttcattactgaagcgggtattatctctgaatc
tggcttgctgtgctcttctgttgttacaatttcttcacagcatctatgct
tttatttccagaactttgatttttatgtgtttacatgcctttattgatat
gtctttt
gaattctttgacctatttggaattgagttttgtgcagtgtgataaatatg
gacttaatttgcatacttctacatctaggcaaccagttagatcagcacca
tttgttgaagatgctctcctccattgtatggtttagctttctttgtcaaa
tgtctgtaggtgtaagggtttatttcagggtctttgatttgattccattg
atccacctgtctgtttctataccaatatcatgcagtttttattactattg
ctctgtggtacagcttgaagtcagggatagtgatacctccagaagttctt
ttcctattcaagatcattttagctatcggggttttttgatttttatagga
agctgagaattgttttttcaagatctataaataattgtgttgagattttg
atggggattgcattgaatctgtagattgcttttggtaatattgccatttt
tgctatgttaattctaccagcccaagagcgtgagagatctttccatattc
tttatttattttgtctgtgtttgtgcctagactatagtgggcattttagg
tctgaggacaacctatgggactctgttctctccctccaccatgtgtgtcc
tgggaactgaactcaggtcatcagcactgacagcagttgctattaccaac
tgagttgtatcactagacccatcatgattttaagaactaagttgcatctg
ttgttctattgattaatgagcagggtcttttaaatgtctatgagctctaa
gtattgtcactcagaatcagtgtatatgtattttgtttgtcttttttgtt
gttgttgttttagaacagtgtcttgtgtatctcagactggccttgaagtt
gctgtgtatcaagatgaccttgaccttcagatccctctctctgtactttc
ttagtgctagggtcacaggtggataccttcatcctggctattgcaatgct
ggggattacccaggctttgcgatgcatgtactcatcttatggtgttcatc
ctaaagtatgatttgatgctggacgattcagttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_98777521_98778635
seq2: B6Ng01-032L03.b_47_1153

seq1  GAATTCATAAATCTAACACTTTTTTGGAGTCAGGATCCCCTGAAGCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATCTAACACTTTTTTGGAGTCAGGATCCCCTGAAGCCCAC  50

seq1  ACTTCCCCTGAACCTTATACAGAGCAAAAGATAACATTGAATGTCATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCCTGAACCTTATACAGAGCAAAAGATAACATTGAATGTCATCTT  100

seq1  CCAAGTACTGCTATTACAAACCTATGCTCAATTTTATGCAGTTCTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTACTGCTATTACAAACCTATGCTCAATTTTATGCAGTTCTAATGA  150

seq1  TCAAGACTAGAACTTTATACAATCTAGACAGACCCTCTGCCAACTGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACTAGAACTTTATACAATCTAGACAGACCCTCTGCCAACTGAGTG  200

seq1  ACATCTCCAACCCCGACACTTGTCTTTGCAAACATGACAGCGGACAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCCAACCCCGACACTTGTCTTTGCAAACATGACAGCGGACAATGA  250

seq1  ATGGCTGAGTTAAAGAACTCCCCTTTCAGAGTTAAAGTTCCAGAAACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGAGTTAAAGAACTCCCCTTTCAGAGTTAAAGTTCCAGAAACCCC  300

seq1  CTAGTTCCTCTTAAGAAGCCCATTTCATTTCCTTCATCTGAGAAGCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCCTCTTAAGAAGCCCATTTCATTTCCTTCATCTGAGAAGCACAT  350

seq1  AGTTAGACATCATTCACTCTTCATATTCCCAAGAGAGCTTTTATGGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACATCATTCACTCTTCATATTCCCAAGAGAGCTTTTATGGGGGA  400

seq1  GAAATGGAGAGGGGTGACAAGGAGACTGCTACTGTGTTTGAATCTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAGAGGGGTGACAAGGAGACTGCTACTGTGTTTGAATCTTGCTT  450

seq1  CCCACACTCTTTCTTTCACTGACCAGCTTTTTAACCCTGAGCAAGTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTCTTTCTTTCACTGACCAGCTTTTTAACCCTGAGCAAGTCACT  500

seq1  TAAATCATTTCCCTAAGATCCCAGGCCTGATCCCAGTGGCTGTTCCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCATTTCCCTAAGATCCCAGGCCTGATCCCAGTGGCTGTTCCAATT  550

seq1  CCCTGGCTTCTATGAAGCCCAAACTTATCACCACAAGGATTCAGACTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTTCTATGAAGCCCAAACTTATCACCACAAGGATTCAGACTCAA  600

seq1  CATTCAACAGCTTATAGTAGCTAATTCTGCTCCACTCCTAAACATTTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACAGCTTATAGTAGCTAATTCTGCTCCACTCCTAAACATTTCCG  650

seq1  TTCCTGTGTCCTTATACAATCATTAAACCTATAGGCACAACATCATTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGTCCTTATACAATCATTAAACCTATAGGCACAACATCATTTAC  700

seq1  CTGGGTCATGTCTCCTACTATAAAAGTTTTACAGAATAGGTCATTTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCATGTCTCCTACTATAAAAGTTTTACAGAATAGGTCATTTGGGG  750

seq1  CATCTAGTTGTCATGGAGTAACGATGAGATGGATTAGCCTTGTGCCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGTTGTCATGGAGTAACGATGAGATGGATTAGCCTTGTGCCACCC  800

seq1  CCATTCACCATCTTCTCTCTCCACCCTTACTCTCATCCCCACCCTCAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCACCATCTTCTCTCTCCACCCTTACTCTCATCCCCACCCTCAGTG  850

seq1  TGCAGCAGCATCCTTCCAGTTTCTCTACTTCATGATTCTCATGAATGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAGCATCCTTCCAGTTTCTCTACTTCATGATTCTCATGAATGTTT  900

seq1  TTCCCTTAGTCTGGGATGTATTCCCACTCGAGTCCCCTTTGTATGGTCAC  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCCCTTAGTCTGGGATGTATTCCCACTCGAGT-CCCTTTGTATGGTCAC  949

seq1  TTGCTCACATCGTCTCCCTTTCATTAACTGAAGCGGTTATTATCTCTGAA  1000
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  TTGCTCACATCGTCTCCCTTTCATT-ACTGAAGCGGGTATTATCTCTGAA  998

seq1  TCTGGCTTGCTGTGCTCTTCCTGTTGTTAC-ATTTCTTCACAGGCATCTA  1049
      ||||||||||||||||||| |||||||||| ||||||||||| |||||||
seq2  TCTGGCTTGCTGTGCTCTT-CTGTTGTTACAATTTCTTCACA-GCATCTA  1046

seq1  TGCTTTTATTTCCCAGAACTTTTTGATATTTATGTGTTTACATGCCTTTA  1099
      ||||||||||| |||||||  |||||| ||||||||||||||||||||||
seq2  TGCTTTTATTT-CCAGAAC--TTTGATTTTTATGTGTTTACATGCCTTTA  1093

seq1  TTGACTAGTGTCTTTT  1115
      |||| || ||||||||
seq2  TTGA-TA-TGTCTTTT  1107