BAC Information

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BAC

Clone NameB6Ng01-034O18
Chromosome3 (Build37)
Map Location 129,239,896 - 129,395,360
singlet/doubletdoublet
Overlap geneElovl6, LOC100043758, Egf
Upstream geneLOC100043393, EG668831, Pitx2, Enpep, LOC100043415, LOC435755, LOC668840
Downstream geneGm421, Rrh, Nola1, Cfi, Pla2g12a, Casp6, Ccdc109b, Sec24b, EG668844, EG668845, Col25a1, Agxt2l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034O18.bB6Ng01-034O18.g
ACCDH863533DH863534
length903354
definitionDH863533|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O18, 5' end.DH863534|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,394,459 - 129,395,360)(129,239,896 - 129,240,249)
sequence
gaattcaaggccagccaggtctatagaggacagctagggctagacagaga
aacgctgtctcaaaaaaccaaaattaaaccaaaaaaaaaaaaaattttaa
aacccaaaaaacaaaacgagagctaatctgtataaaatctgcttagattt
tgatactgagtcttacgcctctggtatgtattttacacatgcagcaaacc
tgagtctggactgcaggctgtggcaccaggttgccgagcacggggagtgg
cgacagggagcctctggcagcttgtcagcagtgtggcctgtgatgggaga
agagccactttcaaggattgttgttattattgttgttaattctttgagat
ggggtttctctgtgtggtcctggctggcctggaactcagaaatccacctg
cctctgcctctcaagtgctggcattaatggtgtgtgccaccgtgcccggc
ttactttcaaggttgctttaaaattgattccttaaagtccgcatgtcttg
acatgaattagcaacccagccagcttttgtttctcttaaaacagtcccca
gtactgacttcatcacccacacagcccaggcagcaccccacaaaagaccc
tgacagccaggccagggcttgccctcctcagttctgcagacagaaaagct
catacttgccttgctctctgggttttatgtgaactgtttttgtttttctc
gggtaattttttttccactttaaaaggtattgaaaaggctggtgagatgg
ctcagtggtttagagcaccccgactgcttcttcttgaaggtcaggagttc
aatcccaccacccacatggtggctccaaccatcttcgtacgagatctgac
tcctctctggatggctgaagacagcttacgggtacttcctttataataaa
taa
catgtgtagctgtcacttattttgaagaatcagacctcatgttagcaaca
tggctgggagtctaagggactgacagcccttccagtgaccttcaggatac
cggtgtcgtgtatgttaagggagataagaccgtgtcatggagaagaaaat
caaggttcttaatgtaatataggaagtgattaaaaaaaaaaaagctatat
gggaacatttgacctgaacttccaagtatctctcaagtattcacctgtct
ttcctgttcagggtcccaaggatgaaagctggcttaatgcagattatact
ttgttattttgttacctgcctatatgtttgtgttagtatatggggatggg
tgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_129394459_129395360
seq2: B6Ng01-034O18.b_49_951 (reverse)

seq1  TTATTTATTAT-ATGTAAGTACACTGTAGCTGTCCTCAGACACTCCAGAA  49
      ||||||||||| | | |||||| |   ||||||| |||| || ||||| |
seq2  TTATTTATTATAAAGGAAGTACCCGTAAGCTGTCTTCAGCCA-TCCAG-A  48

seq1  GAGGGAGTCAGATCTCGTTACG-AGATGGTTGTGAGCCACCATGTGGTTG  98
      || |||||||||||||| |||| ||||||||| |||||||||||||| ||
seq2  GA-GGAGTCAGATCTCG-TACGAAGATGGTTG-GAGCCACCATGTGGGTG  95

seq1  CTGGGATTTGAACTCCTGACCTTC-AGAAG-AGCAGTC-GGGTGCTCTTA  145
       ||||| ||||||||||||||||| ||||| ||||||| ||||||||| |
seq2  GTGGGA-TTGAACTCCTGACCTTCAAGAAGAAGCAGTCGGGGTGCTCTAA  144

seq1  ACCACTGAGCCATCTCACCAGCCCTCTTCAATACCTTTT-AAGTGGAGAA  194
      ||||||||||||||||||||| ||| ||||||||||||| ||||||| ||
seq2  ACCACTGAGCCATCTCACCAG-CCTTTTCAATACCTTTTAAAGTGGAAAA  193

seq1  AAAATTACCCGAGAAAAAC-AAAACAGTTCACTATAAAACCCAGAGAGC-  242
      ||||||||||||||||||| |||||||||||| |||||||||||||||| 
seq2  AAAATTACCCGAGAAAAACAAAAACAGTTCAC-ATAAAACCCAGAGAGCA  242

seq1  AGGCAAGTATGAGCTTTTCTGTCTGCAGAACTGA-GAGGGCAAGCCCTGG  291
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGCAAGTATGAGCTTTTCTGTCTGCAGAACTGAGGAGGGCAAGCCCTGG  292

seq1  CCTGGCTGTCAGGGTCTTTTGTGGGGTGCTGCCTGGGCTGTGTGGGTGAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCAGGGTCTTTTGTGGGGTGCTGCCTGGGCTGTGTGGGTGAT  342

seq1  GAAGTCAGTACTGGGGACTGTTTTAAGAGAAACAAAAGCTGGCTGGGTTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGTACTGGGGACTGTTTTAAGAGAAACAAAAGCTGGCTGGGTTG  392

seq1  CTAATTCATGTCAAGACATGCGGACTTTAAGGAATCAATTTTAAAGCAAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCATGTCAAGACATGCGGACTTTAAGGAATCAATTTTAAAGCAAC  442

seq1  CTTGAAAGTAAGCCGGGCACGGTGGCACACACCATTAATGCCAGCACTTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGTAAGCCGGGCACGGTGGCACACACCATTAATGCCAGCACTTG  492

seq1  AGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCAGGACCACAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGAGGCAGGTGGATTTCTGAGTTCCAGGCCAGCCAGGACCACAC  542

seq1  AGAGAAACCCCATCTCAAAGAATTAACAACAATAATAACAACAATCCTTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCCATCTCAAAGAATTAACAACAATAATAACAACAATCCTTG  592

seq1  AAAGTGGCTCTTCTCCCATCACAGGCCACACTGCTGACAAGCTGCCAGAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGCTCTTCTCCCATCACAGGCCACACTGCTGACAAGCTGCCAGAG  642

seq1  GCTCCCTGTCGCCACTCCCCGTGCTCGGCAACCTGGTGCCACAGCCTGCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTGTCGCCACTCCCCGTGCTCGGCAACCTGGTGCCACAGCCTGCA  692

seq1  GTCCAGACTCAGGTTTGCTGCATGTGTAAAATACATACCAGAGGCGTAAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGACTCAGGTTTGCTGCATGTGTAAAATACATACCAGAGGCGTAAG  742

seq1  ACTCAGTATCAAAATCTAAGCAGATTTTATACAGATTAGCTCTCGTTTTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTATCAAAATCTAAGCAGATTTTATACAGATTAGCTCTCGTTTTG  792

seq1  TTTTTTGGGTTTTAAAATTTTTTTTTTTTTTGGTTTAATTTTGGTTTTTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGGTTTTAAAATTTTTTTTTTTTTTGGTTTAATTTTGGTTTTTT  842

seq1  GAGACAGCGTTTCTCTGTCTAGCCCTAGCTGTCCTCTATAGACCTGGCTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCGTTTCTCTGTCTAGCCCTAGCTGTCCTCTATAGACCTGGCTG  892

seq1  GCCTTGAATTC  902
      |||||||||||
seq2  GCCTTGAATTC  903

seq1: chr3_129239896_129240249
seq2: B6Ng01-034O18.g_77_430

seq1  CATGTGTAGCTGTCACTTATTTTGAAGAATCAGACCTCATGTTAGCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTAGCTGTCACTTATTTTGAAGAATCAGACCTCATGTTAGCAACA  50

seq1  TGGCTGGGAGTCTAAGGGACTGACAGCCCTTCCAGTGACCTTCAGGATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGGAGTCTAAGGGACTGACAGCCCTTCCAGTGACCTTCAGGATAC  100

seq1  CGGTGTCGTGTATGTTAAGGGAGATAAGACCGTGTCATGGAGAAGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTCGTGTATGTTAAGGGAGATAAGACCGTGTCATGGAGAAGAAAAT  150

seq1  CAAGGTTCTTAATGTAATATAGGAAGTGATTAAAAAAAAAAAAGCTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTCTTAATGTAATATAGGAAGTGATTAAAAAAAAAAAAGCTATAT  200

seq1  GGGAACATTTGACCTGAACTTCCAAGTATCTCTCAAGTATTCACCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATTTGACCTGAACTTCCAAGTATCTCTCAAGTATTCACCTGTCT  250

seq1  TTCCTGTTCAGGGTCCCAAGGATGAAAGCTGGCTTAATGCAGATTATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTCAGGGTCCCAAGGATGAAAGCTGGCTTAATGCAGATTATACT  300

seq1  TTGTTATTTTGTTACCTGCCTATATGTTTGTGTTAGTATATGGGGATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTTTGTTACCTGCCTATATGTTTGTGTTAGTATATGGGGATGGG  350

seq1  TGTG  354
      ||||
seq2  TGTG  354