BAC Information

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BAC

Clone NameB6Ng01-034P22
Chromosome3 (Build37)
Map Location 138,310,806 - 138,480,327
singlet/doubletdoublet
Overlap geneTspan5
Upstream geneLOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1
Downstream geneLOC620771, Rap1gds1, EG229879, B930007M17Rik, LOC100039840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034P22.bB6Ng01-034P22.g
ACCDH863585DH863586
length1,015777
definitionDH863585|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P22, 5' end.DH863586|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,479,293 - 138,480,327)(138,310,806 - 138,311,577)
sequence
gaattcttgatagagcataatctcccctcaatcactgggtaggaaaaaca
gtagggaaaatatagctgagagcactgcatggtgggtattttaaaaatgc
agacaaacagcaagaagtagaaacacagtcttgattggagagctatgtct
agcctacatctttctctctcacccttattcaccacttatctcagtataat
ttccttgctgtctccgcagaagacttgaagattgggagaaaatatttcaa
ctatgctcctcagacccttggcctctggtgtgcagcttgttgagcacaca
cttcagtggtccatactgagggttaccatgggtctgcctgaaacattttc
ttactatagttactatgggaatttggctaaagatggttcttactttattg
tattctatatatattacaaagcatctactttattccatatgtattacaaa
gtatccactttattccacatataatatataaatatattacaaagcatcca
cattattccatatatattacaaagtatctactttattccatatataatat
ataaatatattacaaagtatccactttattctgtatatattacaaagtat
ccactttacaaggccctctgactcccctcaaaaggatcatttattttgta
gtaagaacttgactgtgtattcctttttaaaaatgaatacaaaaaaagtc
tttttgctcttctaccttccctttttgaattaacccaatctactaaatac
aatgaacccacacaccaaatacccaatcagagatgaggatacaggacagc
accaggactatcttttctgtgagtccctcgtgctactactgtgccctcat
cagtttagacctccccaccagggcacctttgcctcttgtatagacctccc
accttgtcccagtcaaccccatctcctaagactgagcccactccctgtga
ggatcatgcacttcctcacctatgaatcctgagaagaacaaggactggcc
tctcaggcctgaacc
gaattcagttcagaagttgtgaactctgtctcgtgttgttcatactgttc
aaggacctaactccacttatggcattctcttctccctccctttaatggtt
ttgtcatctgcatccacaaggtctgtcatttattagccccactccctagg
aaagtatacactcttggctcaaagctcagactcaaagcattgtgccctac
acagtgtctgcgcaagggacatctgatgtttaagctcacacacctctgtc
tctcggtaaccagtctcatttccctgcccccacagagggaagatcatatt
gggcttttctctgagtttttactgaaataaaaagcaaactgattcattac
ctttcaagaagcaaatgaagagacaagatttcagaattaaaatggaaaac
ttatgattagtcttagacggttgtaagatggcagagagagtggattttca
tgtgtttaggtgtgtttctttggtcctcaatgggtgtctgcagttacttt
gaagtctgtgggcataaagaaaggattgtatctgtgcagagcagaggttc
tcaagctgtgtgtcacaacacaagtttgtgttggcaaacttctatctcca
agaatatttacatttactaatcataaacagtagcaaaattactgtttatg
aagtagcacctaaaataattttatggtttggagggtcaccacaacacaag
gagctgtattaaagtgtcgcagcattgggaagattaaaagccacatactg
gatggtgggggaattgtatcgtctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_138479293_138480327
seq2: B6Ng01-034P22.b_42_1056 (reverse)

seq1  GGTTCCAGGCCTTGAGAGGCCAGGTCCTTGGTCTTCTCAAGGATTCATTA  50
      |||| |||||| |||||||||| ||||||| ||||||| |||||||| ||
seq2  GGTT-CAGGCC-TGAGAGGCCA-GTCCTTGTTCTTCTC-AGGATTCA-TA  45

seq1  GGTGAGGAAGTGCATGTATCCCTCACAGGGAAGTTGGGCTCAGTTCTTAG  100
      |||||||||||||||| || |||||||||||   ||||||||| ||||||
seq2  GGTGAGGAAGTGCATG-AT-CCTCACAGGGA--GTGGGCTCAG-TCTTAG  90

seq1  GAGATGGGGTATGACTGTGACAAGGTGGGAGGTCTATACAAGA-GCAAAG  149
      |||||||||| |||||| ||||||||||||||||||||||||| ||||||
seq2  GAGATGGGGT-TGACTGGGACAAGGTGGGAGGTCTATACAAGAGGCAAAG  139

seq1  GTGCCCTGGT-GAGAGGTCTTAAACCTGATTGAGGGCACAGGTAGTAGCA  198
      |||||||||| | |||||||  || |||| |||||||||| |||||||||
seq2  GTGCCCTGGTGGGGAGGTCT--AAACTGA-TGAGGGCACA-GTAGTAGCA  185

seq1  CTGAGGACTCACAGAAAGATTAGTTCCTTGGTGCTGTTCCCTGTATCCTC  248
      |   |||||||||||||   ||||  | |||||||||  |||||||||||
seq2  CGAGGGACTCACAGAAAAGATAGT--CCTGGTGCTGT--CCTGTATCCTC  231

seq1  ATCTCTGATTGGGTATTTTGTTGTTGTTGGTTCATTGTATTTAGTAGATT  298
      |||||||||||||||||| ||   ||| ||||||||||||||||||||||
seq2  ATCTCTGATTGGGTATTTGGT--GTGTGGGTTCATTGTATTTAGTAGATT  279

seq1  GGGTTAATTCAAAAAGGGAAGGTAGAAGAGCAAAAAGACTTTTTTTTGTA  348
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGTTAATTCAAAAAGGGAAGGTAGAAGAGCAAAAAGAC-TTTTTTTGTA  328

seq1  TTCATTTTTAAAAAGGAATACACAGTCAAGTTCTTACTACAAAATAAATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTTAAAAAGGAATACACAGTCAAGTTCTTACTACAAAATAAATG  378

seq1  ATCCTTTTGAGGGGAGTCAGAGGGCCTTGTAAAGTGGATACTTTGTAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTGAGGGGAGTCAGAGGGCCTTGTAAAGTGGATACTTTGTAATA  428

seq1  TATACAGAATAAAGTGGATACTTTGTAATATATTTATATATTATATATGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGAATAAAGTGGATACTTTGTAATATATTTATATATTATATATGG  478

seq1  AATAAAGTAGATACTTTGTAATATATATGGAATAATGTGGATGCTTTGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTAGATACTTTGTAATATATATGGAATAATGTGGATGCTTTGTA  528

seq1  ATATATTTATATATTATATGTGGAATAAAGTGGATACTTTGTAATACATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATATATTATATGTGGAATAAAGTGGATACTTTGTAATACATA  578

seq1  TGGAATAAAGTAGATGCTTTGTAATATATATAGAATACAATAAAGTAAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAAAGTAGATGCTTTGTAATATATATAGAATACAATAAAGTAAGA  628

seq1  ACCATCTTTAGCCAAATTCCCATAGTAACTATAGTAAGAAAATGTTTCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTTTAGCCAAATTCCCATAGTAACTATAGTAAGAAAATGTTTCAG  678

seq1  GCAGACCCATGGTAACCCTCAGTATGGACCACTGAAGTGTGTGCTCAACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCCATGGTAACCCTCAGTATGGACCACTGAAGTGTGTGCTCAACA  728

seq1  AGCTGCACACCAGAGGCCAAGGGTCTGAGGAGCATAGTTGAAATATTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCACACCAGAGGCCAAGGGTCTGAGGAGCATAGTTGAAATATTTTC  778

seq1  TCCCAATCTTCAAGTCTTCTGCGGAGACAGCAAGGAAATTATACTGAGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCTTCAAGTCTTCTGCGGAGACAGCAAGGAAATTATACTGAGAT  828

seq1  AAGTGGTGAATAAGGGTGAGAGAGAAAGATGTAGGCTAGACATAGCTCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTGAATAAGGGTGAGAGAGAAAGATGTAGGCTAGACATAGCTCTC  878

seq1  CAATCAAGACTGTGTTTCTACTTCTTGCTGTTTGTCTGCATTTTTAAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGACTGTGTTTCTACTTCTTGCTGTTTGTCTGCATTTTTAAAAT  928

seq1  ACCCACCATGCAGTGCTCTCAGCTATATTTTCCCTACTGTTTTTCCTACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCATGCAGTGCTCTCAGCTATATTTTCCCTACTGTTTTTCCTACC  978

seq1  CAGTGATTGAGGGGAGATTATGCTCTATCAAGAATTC  1035
      |||||||||||||||||||||||||||||||||||||
seq2  CAGTGATTGAGGGGAGATTATGCTCTATCAAGAATTC  1015

seq1: chr3_138310806_138311577
seq2: B6Ng01-034P22.g_67_843

seq1  GAATTCAGTTCAGAAGTTGTGAACTCTGTCTCGTGTTGTTCATACTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCAGAAGTTGTGAACTCTGTCTCGTGTTGTTCATACTGTTC  50

seq1  AAGGACCTAACTCCACTTATGGCATTCTCTTCTCCCTCCCTTTAATGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCTAACTCCACTTATGGCATTCTCTTCTCCCTCCCTTTAATGGTT  100

seq1  TTGTCATCTGCATCCACAAGGTCTGTCATTTATTAGCCCCACTCCCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCTGCATCCACAAGGTCTGTCATTTATTAGCCCCACTCCCTAGG  150

seq1  AAAGTATACACTCTTGGCTCAAAGCTCAGACTCAAAGCATTGTGCCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATACACTCTTGGCTCAAAGCTCAGACTCAAAGCATTGTGCCCTAC  200

seq1  ACAGTGTCTGCGCAAGGGACATCTGATGTTTAAGCTCACACACCTCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCTGCGCAAGGGACATCTGATGTTTAAGCTCACACACCTCTGTC  250

seq1  TCTCGGTAACCAGTCTCATTTCCCTGCCCCCACAGAGGGAAGATCATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGTAACCAGTCTCATTTCCCTGCCCCCACAGAGGGAAGATCATATT  300

seq1  GGGCTTTTCTCTGAGTTTTTACTGAAATAAAAAGCAAACTGATTCATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTTCTCTGAGTTTTTACTGAAATAAAAAGCAAACTGATTCATTAC  350

seq1  CTTTCAAGAAGCAAATGAAGAGACAAGATTTCAGAATTAAAATGGAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAGAAGCAAATGAAGAGACAAGATTTCAGAATTAAAATGGAAAAC  400

seq1  TTATGATTAGTCTTAGACGGTTGTAAGATGGCAGAGAGAGTGGATTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTAGTCTTAGACGGTTGTAAGATGGCAGAGAGAGTGGATTTTCA  450

seq1  TGTGTTTAGGTGTGTTTCTTTGGTCCTCAATGGGTGTCTGCAGTTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAGGTGTGTTTCTTTGGTCCTCAATGGGTGTCTGCAGTTACTTT  500

seq1  GAAGTCTGTGGGCATAAAGAAAGGATTGTATCTGTGCAGAGCAGAGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTGTGGGCATAAAGAAAGGATTGTATCTGTGCAGAGCAGAGGTTC  550

seq1  TCAAGCTGTGTGTCACAACACAAGTTTGTGTTGGCAAACTTCTATCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGTGTGTCACAACACAAGTTTGTGTTGGCAAACTTCTATCTCCA  600

seq1  AGAATATTTACA-TTACTAATCAT-AACAGTAGCAAAATTACTG-TTATG  647
      |||||||||||| ||||||||||| ||||||||||||||||||| |||||
seq2  AGAATATTTACATTTACTAATCATAAACAGTAGCAAAATTACTGTTTATG  650

seq1  AAGTAGCACCAAAAATAATTTTATGG-TTGGAGGGTCACCACAACACAAG  696
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  AAGTAGCACCTAAAATAATTTTATGGTTTGGAGGGTCACCACAACACAAG  700

seq1  GAGCTGTATTAAAGTGTCGCAGCATTGGGAAGATTAAAAGCCACAGTACT  746
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGCTGTATTAAAGTGTCGCAGCATTGGGAAGATTAAAAGCCACA-TACT  749

seq1  GGATGGTGGGG--ATTGTATCGTCTGGA  772
      |||||||||||  |||||||||||||||
seq2  GGATGGTGGGGGAATTGTATCGTCTGGA  777