BAC Information

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BAC

Clone NameB6Ng01-035J03
Chromosome3 (Build37)
Map Location 140,414,329 - 140,415,022
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC229883
Downstream geneLOC621343, 4930590L14Rik, Pdha2, Unc5c, LOC100039923
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035J03.bB6Ng01-035J03.g
ACCDH863999DH864000
length845692
definitionDH863999|Mus musculus domesticus DNA, BAC clone: B6Ng01-035J03, 5' end.DH864000|Mus musculus domesticus DNA, BAC clone: B6Ng01-035J03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacagcttgatctgaaaactgctataaaaagactaaccatcttc
caggaaactaggagaagggtctcaaaggccattctcatagtaacacactt
ccaccaacaaggccacacctattacaacaaggccacatctccaaatagtg
ccactccctgagtcaagcatatacaaaccaccatggattccatattatat
ccatcagaatagctaaaatcagaacctcaagggagaactcatgttggcag
tgatgtagagcaaggagaatactcctccattgctggtgaaagtgctaact
ggtacaactactttggaaatcaattggtgatttctcagaaaattgggaat
atttctaccttgaaacccagctataccactcttgggtgtttatcaaaaag
acgctgtaataacacaagggtattttattcagctatgttcatagcaattt
tgttcataatggccagaaactggaaacaacctagatgtccttcaactata
gaatggataaagaaaccatggtacatttacataatggagtactattcagc
tattaaaaacaaggtgatcatgaaatttgcagaaaaatggatggaaatag
aaaatattatcctaagtaaggtaactgtggtggtttgaatatgtttggcc
ccagagagtggcactattaggaggtgtagccttgttggaggaggtgtggc
tttaattggaggaagtgtgtcactatgggagtgagctttgagaccctttc
tcctagcctcctgaggagattctgttctttggctccttttggataaaatt
agaactataagctcccctgttccatgcctgccttgcacgacatat
gaattcatactgctgtgtataagcatgtgtgtgcctctgtgcatgtgctt
gtatccatgcatttgcatttgtgcatttgtatgtatgagaaaatatgtgt
tttttttaccagcatgctaattttttacttacatgtgtgtgagaatgaac
atgtgcacatgtatgcacttgtgcatgtccctgaactttatgtgtttaca
tatatatgtgagcatgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtc
tgtgtgtctgtgtgtctgtgtgtgcacacgctgggtgggtggggctgatt
ttgcaaaaatgtgaggagtacaagaagagggaaaaaaataccatgccaga
aaaaaaaaaaaatcaagatcccttcagtgtcttcaaagaagaggattctc
tttagaactcatcatttaaatgccaccttataactgtgttaagctaaatt
ccatctttaaaaaagaaatctcctaattttaatcagccagtaccatatgc
ctttaatattccatcctatgattttgaaacttgcctcaatgcattcagct
agaattattcaagggagatggaaggaaaaagcatgtttaaagggattaat
tccttgtaattgtaaaagaacattatgactgaaatgtcaagaaaaggact
ggagtattttaaattgtcaattggaacccgctgttctaatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_140414329_140415022
seq2: B6Ng01-035J03.g_66_757

seq1  GAATTCATACTGCTGTGTATAAGCATGTGTGTGCCTCTGTGCATGTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTGCTGTGTATAAGCATGTGTGTGCCTCTGTGCATGTGCTT  50

seq1  GTATCCATGCATTTGCATTTGTGCATTTGTATGTATGAGAAAATATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCATGCATTTGCATTTGTGCATTTGTATGTATGAGAAAATATGTGT  100

seq1  TTTTTTTACCAGCATGCTAATTTTTTACTTACATGTGTGTGAGAATGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACCAGCATGCTAATTTTTTACTTACATGTGTGTGAGAATGAAC  150

seq1  ATGTGCACATGTATGCACTTGTGCATGTCCCTGAACTTTATGTGTTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATGTATGCACTTGTGCATGTCCCTGAACTTTATGTGTTTACA  200

seq1  TATATATGTGAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTGAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTC  250

seq1  TGTGTGTCTGTGTGTCTGTGTGTGCACACGCTGGGTGGGTGGGGCTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTCTGTGTGTCTGTGTGTGCACACGCTGGGTGGGTGGGGCTGATT  300

seq1  TTGCAAAAATGTGAGGAGTACAAGAAGAGGGAAAAAAATACCATGCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAAATGTGAGGAGTACAAGAAGAGGGAAAAAAATACCATGCCAGA  350

seq1  AAAAAAAAAAAATCAAGATCCCTTCAGTGTCTTCAAAGAAGAGGATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAATCAAGATCCCTTCAGTGTCTTCAAAGAAGAGGATTCTC  400

seq1  TTTAGAACTCATCA-TTAAATGCCACCTTATAACTGTGTTAAGCTAAATT  449
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTAGAACTCATCATTTAAATGCCACCTTATAACTGTGTTAAGCTAAATT  450

seq1  CCATCTTTAAAAAAGAAATCTCCTAATTTTAATCAGCCAGTACCATATGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTAAAAAAGAAATCTCCTAATTTTAATCAGCCAGTACCATATGC  500

seq1  CTTTAATATTCCATCCTATGA-TTTGAAACTTGCCTCAATGCATTCAGCT  548
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTTAATATTCCATCCTATGATTTTGAAACTTGCCTCAATGCATTCAGCT  550

seq1  AGAATTAATCAAGGGAGATGGAAGGAAAAAGCATGTTTAAAGGGATTAAA  598
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  AGAATTATTCAAGGGAGATGGAAGGAAAAAGCATGTTTAAAGGGATTAAT  600

seq1  TCCTTGTAACTGTAAAAGAACATTATGACTGAAAATGTCAAGAAAAGGAC  648
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  TCCTTGTAATTGTAAAAGAACATTATGACTG-AAATGTCAAGAAAAGGAC  649

seq1  TGGAGTATTTTAAATTTGTCATATTGAAACCCGCTGTTTCTAATCA  694
      |||||||||||||| |||||| |||| ||||||||| |||||||||
seq2  TGGAGTATTTTAAA-TTGTCA-ATTGGAACCCGCTG-TTCTAATCA  692