BAC Information

Click to search

BAC

Clone NameB6Ng01-036B08
Chromosome3 (Build37)
Map Location 41,059,222 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B08.bB6Ng01-036B08.g
ACCDH864373DH864374
length1,142598
definitionDH864373|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B08, 5' end.DH864374|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggattatttttttcttggttttatgaaaaataacattggcat
ttgggtgggaatcttattgaatatgcaaattacttctggcaacatagcta
tttccatgccattgattctgccaaattcatctttgctttcttttttgcag
tgtcctgaagttttcactgcagggatctttcactttcttgcttagatgta
ttcaattgtacttttttttaaagctattatgaatgagataagtttcctaa
tatcttctcttgtgagttaattgtgagaatatgtgaagactactgataac
tgtaacctgccatcttatggaaactttctaatatatctatgaagattttt
ttttttaggttctaaagagtcttttaagtatagaatcctgccatctgcaa
agagggacagcttgatgtcatattctctaacttccaactaatttgtgtat
ttctctcatcttattgttctacctatgactttcaagcacattgttgaata
aaacagaaaaaagtgtatatccgtagtccattcctgcttctggagacaat
gcttttagtttttcccccatttggcataatttccattatgttgtgatggt
tcaaataaaaatggcatccatagattctttttctgattttgatcctcagt
tgatagactgcttggaaggaatgggaatgtggcttgtttgaggggagctg
tgtcatttgggggtgagttttgaggttcagactaattacaccatccccag
tgtcttttcctctgtgcttggggttgtgtctcaagagtgagctctagcta
ctactcagtaccttgcctgcctgcctccttccaagctcccccaccatgtt
tctgctcatgaattctactatttaaagccttgaattcctaactaatggtt
tcttttggtatgtaccccagtctgaattttttttcacagtaatagaaagt
agcttgagaagtctattttctacagcatactcatctatttctgcatgact
tggtcatggagctgttgaacttttcatatcgttctggtactaacaagttg
gtgtccaattaatggaatttttgtgttgacactgtcacctcgaagatctg
gtcatgaatttgcataatggctgtatgtgggatacctattgc
gaattctttgtttagctctgaggcccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattattccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatggattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatgtcttcgaggcttttccctac
tttgtcctctataagtttcagtgtctccggttttatgtggagttccttaa
tccagttagatttgaccttagtacaaggagataggaatggatcaattcac
attcttctacatgataacagccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccgtaggtgtgtgggttcatttctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059222_41059737
seq2: B6Ng01-036B08.g_67_583 (reverse)

seq1  ATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTACGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTT  100
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCT  100

seq1  GTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTA  150
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  GTTATCATGTAGAAGAATGTGAATTGATCCATTCCTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTG  200
      ||||||||||||| ||||| ||||||| |||||||||||| |||||||||
seq2  AGGTCAAATCTAACTGGATTAAGGAACTCCACATAAAACCGGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGG  250
      |||||||||||||| ||||| ||||||||||| ||||| ||||  |||||
seq2  AAACTTATAGAGGACAAAGTAGGGAAAAGCCTCGAAGACATGGGTACAGG  250

seq1  GGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAA  300
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  GGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGAC  350
      |  | |||||||||||||| ||| |||||||||||||||| |||||||||
seq2  TCCATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAAGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCA  449
      |||||| ||||||||||||||| ||||||||||||||||| |||||||||
seq2  CTATCCCAAATCAGATAGGGGAATAATATCCAATATATATAAAGAACTCA  450

seq1  AGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  499
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  AGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGCCTCA  500

seq1  GAGCTAAACAAAGAATT  516
      |||||||||||||||||
seq2  GAGCTAAACAAAGAATT  517