BAC Information

Click to search

BAC

Clone NameB6Ng01-036B21
Chromosome3 (Build37)
Map Location 41,059,312 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B21.bB6Ng01-036B21.g
ACCDH864397DH864398
length88987
definitionDH864397|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B21, 5' end.DH864398|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggaaaagatcctttcccaatcagtcggtgacct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttgtcgatcctcaatcttatagcacaagccattgctgtc
ctattcaggaatttttcccctatacccatatcttcgaggcttttccctac
cttctcctctataagtttctgtgtctctggttttatgtggagttccttaa
tccacttagatgtgaccttagaacaaggagataggaatggatcaattcgc
attcttctacatgataaccgccagttgttctgagattccacctcacacca
gtcagaagggctaagatcaaaaattcaggtgacaacaggtgctggccagg
atgtggagaaagaggcacactcctccattgttggtgggtttgctagcttg
tacaaccactctggaaatcagtctggcggctcctcggaaaattggacata
gtactaccagaggatcccacaatacctctcctgggcatatgtccagaaga
tattctaacccgtaagaagggcacacactccactatgtttcatagcagcc
ttatttataatagccacaagctggaaagaacccagatgcccctcaaaaga
ggaatggatacagaaaatgtggtacatttacacaatggagtactactccg
ctattaaaaataatgaattttagcagccttatttataatagccagaagct
gggaagaacccagatgcccctcaacagaggatggataca
attaatgctgagagatgttaaagacaggtaattgtttgttcctgttatgt
ttgttacaggtggtggtagtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059312_41059737
seq2: B6Ng01-036B21.b_46_472 (reverse)

seq1  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCT  50
      ||||||||  ||||||||||||||||||||||||||||||| ||||||||
seq2  ACAACTGGCGGTTATCATGTAGAAGAATGCGAATTGATCCATTCCTATCT  50

seq1  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACC  100
      |||||| ||||||||| |||||||||||| ||||||| ||||||||||||
seq2  CCTTGTTCTAAGGTCACATCTAAGTGGATTAAGGAACTCCACATAAAACC  100

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  150
      |||||||| |||||||||||||||||| || ||||||||||| |||||||
seq2  AGAGACACAGAAACTTATAGAGGAGAAGGTAGGGAAAAGCCTCGAAGATA  150

seq1  TGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTA  200
      |||  | |||||||||||||||| |||| |||||||||||||||||| ||
seq2  TGGGTATAGGGGAAAAATTCCTGAATAGGACAGCAATGGCTTGTGCTATA  200

seq1  AGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAA  250
      |||||||| || ||||||||||||||||| ||| ||||||||||||||||
seq2  AGATTGAGGATCGACAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAA  250

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAAA  299
      |||||||||||| |||||||||||||||||| |||| || ||||||||||
seq2  GGCAAAAGACACTGTCAATAAGACAAAAAGGTCACCGACTGATTGGGAAA  300

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAATATATAT  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTTCCTATCCTAAATCAGATAGGGGACTAATATCCAATATATAT  350

seq1  CAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAA  399
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAAAA  400

seq1  ATGGGGCTCAGAGCTAAACAAAGAATT  426
      |||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAGCTAAACAAAGAATT  427