BAC Information

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BAC

Clone NameB6Ng01-036O11
Chromosome3 (Build37)
Map Location 120,177,925 - 120,178,928
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043275, LOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036O11.bB6Ng01-036O11.g
ACCDH864936DH864937
length493994
definitionDH864936|Mus musculus domesticus DNA, BAC clone: B6Ng01-036O11, 5' end.DH864937|Mus musculus domesticus DNA, BAC clone: B6Ng01-036O11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctatacactataataaaatctttctctagatatacttccagg
agaaggaaggcgaaagcagttagcacaactacactcataacagctttatt
cataatagtgagaaactggaaacaacctagatatccttcaagtgagaatg
gaaaaagaaaatgtggtacatacatatggtggagtactactcaattgtag
aaaaagatgacatcatgaaattttccgagcaataaatctcaaaataaaaa
tcatcctgaataggtaacccagacccagaaagacacatatagtgtgtact
cacttataaataaatagctattagcttttaagtaaatgacaatccagctg
caacccagagacccagagaaatggttagataaaaaagaaaacttccactg
aggagagacccttggtctggggaaggctcaatgctccagtgtaggggaat
gccagggcatggaggcaggagtgggtgggcgggtgggtgggtg

gaattctagaaaaaaaaaatggctagactaaggaaggaaatgactagcat
gggatgagatgggtcaagcagatggttccaatgtaggcttggaagttcct
gccaatggcaggactcttatcagctcatccaaaggtgggacagaagagga
gcatggataagtaggacatagacaaaacccaggaagctggagtcatatct
tctgttaaaaacgttctcattcctgtttccagaagttgtgacacatctta
gcagaaacgtttctaaaccaaaactggacaggtaatcaactaaagtaaga
atatggtcattatgcttccaggtgttcagggcttcagatgatatatatgc
atgcgtatcacacattatacatgctggaactagctgacaaggtaacagtt
tacaatagattctcaggtttgtaagagggagggaggcagagagaggaaga
gggagacagagagacagaaaggagagaaactgttctgttttctaagcact
gagtgggttttgggcaatgggcatatatattggagagcctgttctgtttc
caggtgaggctcatgaataatgcacctgtgttgtcctcaaggattttcca
atccacacatacagagctcatccgtaaataaatgatgccctttcttggca
gtgtgagacaggaaggaccagtcagagcatcgtctctgtcctgaggggct
gaagactaaggttcaaagcaggatgttatctgacaaatggcatgctgcaa
gcaaatacaaagcgaggtattagagggaagaaagcagtggtattaatgta
aaaagggcataaactccctagtcatcgttgcagcacctccaggcctagtg
caacggtattagtgctttgggaatggctccctccgatccctggaatggag
tggacacttcagcagttcactcattctcagcatactagtagtgaacaaat
gtgatataatctcagtacggactccaggacttcttaatgatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120177925_120178928
seq2: B6Ng01-036O11.g_67_1060

seq1  GAATTCTAGAAAAAAAAAATGGCTAGACTAAGGAAGGAAATGACTAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAAAAAAAAATGGCTAGACTAAGGAAGGAAATGACTAGCAT  50

seq1  GGGATGAGATGGGTCAAGCAGATGGTTCCAATGTAGGCTTGGAAGTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGATGGGTCAAGCAGATGGTTCCAATGTAGGCTTGGAAGTTCCT  100

seq1  GCCAATGGCAGGACTCTTATCAGCTCATCCAAAGGTGGGACAGAAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGGCAGGACTCTTATCAGCTCATCCAAAGGTGGGACAGAAGAGGA  150

seq1  GCATGGATAAGTAGGACATAGACAAAACCCAGGAAGCTGGAGTCATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATAAGTAGGACATAGACAAAACCCAGGAAGCTGGAGTCATATCT  200

seq1  TCTGTTAAAAACGTTCTCATTCCTGTTTCCAGAAGTTGTGACACATCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAAAAACGTTCTCATTCCTGTTTCCAGAAGTTGTGACACATCTTA  250

seq1  GCAGAAACGTTTCTAAACCAAAACTGGACAGGTAATCAACTAAAGTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACGTTTCTAAACCAAAACTGGACAGGTAATCAACTAAAGTAAGA  300

seq1  ATATGGTCATTATGCTTCCAGGTGTTCAGGGCTTCAGATGATATATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTCATTATGCTTCCAGGTGTTCAGGGCTTCAGATGATATATATGC  350

seq1  ATGCGTATCACACATTATACATGCTGGAACTAGCTGACAAGGTAACAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTATCACACATTATACATGCTGGAACTAGCTGACAAGGTAACAGTT  400

seq1  TACAATAGATTCTCAGGTTTGTAAGAGGGAGGGAGGCAGAGAGAGGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAGATTCTCAGGTTTGTAAGAGGGAGGGAGGCAGAGAGAGGAAGA  450

seq1  GGGAGACAGAGAGACAGAAAGGAGAGAAACTGTTCTGTTTTCTAAGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACAGAGAGACAGAAAGGAGAGAAACTGTTCTGTTTTCTAAGCACT  500

seq1  GAGTGGGTTTTGGGCAATGGGCATATATATTGGAGAGCCTGTTCTG-TTC  549
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGTGGGTTTTGGGCAATGGGCATATATATTGGAGAGCCTGTTCTGTTTC  550

seq1  CAGGTGAGGCTCATGAATAATGCACCTGTGTTGTCCTCAAGGATTTTCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGCTCATGAATAATGCACCTGTGTTGTCCTCAAGGATTTTCCA  600

seq1  ATCCACACATACAGAGCTCATCCGTAAATAAATGATG-CCATTCTTGGCA  648
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  ATCCACACATACAGAGCTCATCCGTAAATAAATGATGCCCTTTCTTGGCA  650

seq1  GTGTGAGACAGGAA-GACCAGTCAGAGCATCGTCTCTGTCCTGA-GGGCT  696
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  GTGTGAGACAGGAAGGACCAGTCAGAGCATCGTCTCTGTCCTGAGGGGCT  700

seq1  GAAGACTAAGGTTTCAAAGCAGGATGTTATCTGACAAATGCAATGCTGCC  746
      ||||||||||| ||||||||||||||||||||||||||||  |||||| |
seq2  GAAGACTAAGG-TTCAAAGCAGGATGTTATCTGACAAATGGCATGCTG-C  748

seq1  AAGCAAATACAAAAGCGAGGTATTAGAGGGAAGAAAGCAGT-GTATTAAT  795
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  AAGCAAATAC-AAAGCGAGGTATTAGAGGGAAGAAAGCAGTGGTATTAAT  797

seq1  GTAAAACAGGCATAAACTCCCTAGTCATCGTTGCAGCAACTCCAGGCCTA  845
      ||||||  |||||||||||||||||||||||||||||| |||||||||||
seq2  GTAAAAAGGGCATAAACTCCCTAGTCATCGTTGCAGCACCTCCAGGCCTA  847

seq1  GTGCAACGGTATTAGTGCTTTGGGAATGGCTCCCTCCGATCCCTGG-ATT  894
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  GTGCAACGGTATTAGTGCTTTGGGAATGGCTCCCTCCGATCCCTGGAATG  897

seq1  GAGTGAACACTTCAGCAGTTTCTAACTCATTTCTTCAGGCATTACTAGTA  944
      ||||| |||||||||||||   | |||||||   ||| ||| ||||||||
seq2  GAGTGGACACTTCAGCAGT---TCACTCATT--CTCA-GCA-TACTAGTA  940

seq1  GTAGAACAAAATGTGATTATTAGTCTCCAGTACGGACTCAAGGACTTCTT  994
      || |||| |||||||||   || ||| |||||||||||| ||||||||||
seq2  GT-GAAC-AAATGTGAT--ATAATCT-CAGTACGGACTCCAGGACTTCTT  985

seq1  AAATGATCTC  1004
       |||||||||
seq2  -AATGATCTC  994


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