BAC Information

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BAC

Clone NameB6Ng01-037L14
Chromosome3 (Build37)
Map Location 30,503,056 - 30,665,751
singlet/doubletdoublet
Overlap geneMynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7
Upstream gene6130401L20Rik, LOC100040676, Evi1, Mds1, LOC100040727, LOC100040734, LOC100040749, Arpm1
Downstream geneTloc1, Gpr160, Phc3, LOC100040809, Prkci, Skil, Cldn11, Slc7a14, LOC625125
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037L14.bB6Ng01-037L14.g
ACCDH865498DH865499
length803529
definitionDH865498|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L14, 5' end.DH865499|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,664,949 - 30,665,751)(30,503,056 - 30,503,590)
sequence
gaattcatccaaatctctgtttgctctttccagtttcaaagtctaaaccc
acactaatacctgcatgaacacataaatgacatagataagttttatatga
gaccaaacccttgtcatggaagaaagaaaaaccaaaaattaccaaaacaa
aactaaatgagaactctagaggaagggcttggatgcccaccttccagacc
aaacggggagtcagtactgtgctctctgtgtcagtaagttaaatctatgt
gtttcaattctccatgtctgtgaaaggaccccaaaaagcagtgactggaa
acagcaagtttgcgacaacagttctgtggtcagggactgaacggaggctt
ggcagagagcctggactaaggtcttgtgagttggcattaggctgtggacc
aagactttcacatacctgaaaggcaggcaagctctgcggtgtccactgtc
aaggttagtcacgtggtgtcacccagggcctcttggagagggaaactgac
gtagaaatgggacagaagccacagcagggatccctgccgggccttatggg
tgtgcttaggaaggtgtgtttctttggttcagcacactgtaggggagggg
tatacaaaggcaagcaccctcgacaatgggtgggctatcttaaaggcttt
ctgctagggtttatttacttgaactgagagtgtcacgtgagacacatttc
tcaaggtttacaattcagacatttaaaataagacctcctatgcttgccag
ccagtcccctctctgatcatactgttgccagtgtgtgtgtgtgtgtgggt
gtg
catctgacagacttattcaccaaaaaaaaaaaaaaaaggctctatttcaa
ttttgcaaattctgaatttaaagtaggttttcctttggtcttcatgtccc
tcaggccctctctcacacagtctctgtccgttgctgcttctagggtattt
ggagtagagttgttgaagaaccacctcaggcctcatggcctcatggcctt
ctagtgctcatatttaaatggcaacgtgcaggactttctgattgtggttc
tggaaagtaacttcgtggaaatgcaagtagcattaagtctgttcccgttg
tcaacctatccaaagcttgaatcaagccagaggcatcactgtgtttctct
taagggtcttaaccgttgggctccagaggtgcattggtcaagtgcctgcc
gtgcaaggatgaggacctgatttcgggtccttagccaccaaataaaagca
gttttgtgataccagtgctgctggggtggagctcattagcccgcccgccc
gccctcctgccagccagccagccagccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_30664949_30665751
seq2: B6Ng01-037L14.b_48_850 (reverse)

seq1  CACACACACACACACACACACACTGGCAACAGTATGATCAGAGAGGGGAC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCACACACACACACACACTGGCAACAGTATGATCAGAGAGGGGAC  50

seq1  TGGCTGGCAAGCATAGGAGGTCTTATTTTGAATGGTCTGAATTGTAAACC  100
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  TGGCTGGCAAGCATAGGAGGTCTTATTTTAAAT-GTCTGAATTGTAAACC  99

seq1  TTGAG-AATGTGTCTCACGTGACACTCTCAGTTCAAGTAAATAAACCCTA  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAATGTGTCTCACGTGACACTCTCAGTTCAAGTAAATAAACCCTA  149

seq1  GCAGAAAGCCTTTAAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGCCTTTAAGATAGCCCACCCATTGTCGAGGGTGCTTGCCTTTG  199

seq1  TATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCCTAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCCTCCCCTACAGTGTGCTGAACCAAAGAAACACACCTTCCTAAG  249

seq1  CACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCATAAGGCCCGGCAGGGATCCCTGCTGTGGCTTCTGTCCCATTT  299

seq1  CTACGTCAGTTTCCCTCTCCAAGAGGCCCTGGGTGACACCACGTGACTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGTCAGTTTCCCTCTCCAAGAGGCCCTGGGTGACACCACGTGACTAA  349

seq1  CCTTGACAGTGGACACCGCAGAGCTTGCCTGCCTTTCAGGTATGTGAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAGTGGACACCGCAGAGCTTGCCTGCCTTTCAGGTATGTGAAAG  399

seq1  TCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGGCTCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTCCACAGCCTAATGCCAACTCACAAGACCTTAGTCCAGGCTCTC  449

seq1  TGCCAAGCCTCCGTTCAGTCCCTGACCACAGAACTGTTGTCGCAAACTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGCCTCCGTTCAGTCCCTGACCACAGAACTGTTGTCGCAAACTTG  499

seq1  CTGTTTCCAGTCACTGCTTTTTGGGGTCCTTTCACAGACATGGAGAATTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCAGTCACTGCTTTTTGGGGTCCTTTCACAGACATGGAGAATTG  549

seq1  AAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACTCCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATAGATTTAACTTACTGACACAGAGAGCACAGTACTGACTCCCC  599

seq1  GTTTGGTCTGGAAGGTGGGCATCCAAGCCCTTCCTCTAGAGTTCTCATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCTGGAAGGTGGGCATCCAAGCCCTTCCTCTAGAGTTCTCATTT  649

seq1  AGTTTTGTTTTGGTAATTTTTGGTTTTTCTTTCTTCCATGACAAGGGTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTTTTGGTAATTTTTGGTTTTTCTTTCTTCCATGACAAGGGTTT  699

seq1  GGTCTCATATAAAACTTATCTATGTCATTTATGTGTTCATGCAGGTATTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATATAAAACTTATCTATGTCATTTATGTGTTCATGCAGGTATTA  749

seq1  GTGTGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTTTAGACTTTGAAACTGGAAAGAGCAAACAGAGATTTGGATGA  799

seq1  ATTC  803
      ||||
seq2  ATTC  803

seq1: chr3_30503056_30503590
seq2: B6Ng01-037L14.g_72_606

seq1  GAATTCCATCTGACAGACTTATTCACCAAAAAAAAAAAAAAAAGGCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGACAGACTTATTCACCAAAAAAAAAAAAAAAAGGCTCTA  50

seq1  TTTCAATTTTGCAAATTCTGAATTTAAAGTAGGTTTTCCTTTGGTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTTGCAAATTCTGAATTTAAAGTAGGTTTTCCTTTGGTCTTCA  100

seq1  TGTCCCTCAGGCCCTCTCTCACACAGTCTCTGTCCGTTGCTGCTTCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCAGGCCCTCTCTCACACAGTCTCTGTCCGTTGCTGCTTCTAGG  150

seq1  GTATTTGGAGTAGAGTTGTTGAAGAACCACCTCAGGCCTCATGGCCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGAGTAGAGTTGTTGAAGAACCACCTCAGGCCTCATGGCCTCAT  200

seq1  GGCCTTCTAGTGCTCATATTTAAATGGCAACGTGCAGGACTTTCTGATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTAGTGCTCATATTTAAATGGCAACGTGCAGGACTTTCTGATTG  250

seq1  TGGTTCTGGAAAGTAACTTCGTGGAAATGCAAGTAGCATTAAGTCTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGGAAAGTAACTTCGTGGAAATGCAAGTAGCATTAAGTCTGTTC  300

seq1  CCGTTGTCAACCTATCCAAAGCTTGAATCAAGCCAGAGGCATCACTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGTCAACCTATCCAAAGCTTGAATCAAGCCAGAGGCATCACTGTGT  350

seq1  TTCTCTTAAGGGTCTTAACCGTTGGGCTCCAGAGGTGCATTGGTCAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTAAGGGTCTTAACCGTTGGGCTCCAGAGGTGCATTGGTCAAGTG  400

seq1  CCTGCCGTGCAAGGATGAGGACCTGATTTCGGGTCCTTAGCCACCAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGTGCAAGGATGAGGACCTGATTTCGGGTCCTTAGCCACCAAATA  450

seq1  AAAGCAGTTTTGTGATACCAGTGCTGCTGGGGTGGAGCTCATTAGCCCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGTTTTGTGATACCAGTGCTGCTGGGGTGGAGCTCATTAGCCCGC  500

seq1  CCGCCCGCCCTCCTGCCAGCCAGCCAGCCAGCCAG  535
      |||||||||||||||||||||||||||||||||||
seq2  CCGCCCGCCCTCCTGCCAGCCAGCCAGCCAGCCAG  535