BAC Information

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BAC

Clone NameB6Ng01-037M07
Chromosome3 (Build37)
Map Location 66,911,298 - 66,912,281
singlet/doubletsinglet
Overlap geneRsrc1
Upstream geneVeph1, Tpi-rs2, Ptx3, LOC625115, Shox2
Downstream geneMlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412, EG208426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037M07.bB6Ng01-037M07.g
ACCDH865531DH865532
length970979
definitionDH865531|Mus musculus domesticus DNA, BAC clone: B6Ng01-037M07, 5' end.DH865532|Mus musculus domesticus DNA, BAC clone: B6Ng01-037M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagcactatattgaataggtagggagaaagtgggcagccttgtc
tagtcccggattttagtgggattgcttcaagtttctctccatttagcttg
atattggttactggtttgctgtatattgcttttattatgtttgggtatga
gccttgaattcctgatctttccaagacttttatcatgaatgggtgttgaa
ttttgttgaacgacttctcagcatctaatgagatgatcacatggttgttt
ttcttgagtttgcttatatagtggattacactgatggatttctgtatatt
gaaccatccctgcatccctgggatgaagcctacttgatcatgatggatga
tccttttattcttggcttttattttattcttggcttcggtttgtgaaaat
tttattgagctttttttgcattgatattcataagggaaactggtctgaag
ttctctttacttattgggtctttgtgtggtttaggtatcagagtaattgt
gacttcacagaatgaattgggtagagtaccttctgttactattttgtgga
atacttggaggagtactggtattaggtcttctttgaaggtctgataaaac
cttgcactaaacccatctggtcctgagcttttcttggttgggagactatt
gatgactgcttctatttctttaggggaaatgggacatttagatcattaat
ctgatcctgatttaactttggtacctggtatctgtctagaaaattgtcca
tttcatccaggttttccagttttgttgagtaaagacttttgtagtagatc
tgatttttttttttttaatttcctcagtttctgtgttatgtctccctttt
catttctgattttgttaataaggatactgtctctgtgccctctggttagt
ctggttaaggtttatcaattttgttgatttctcaagaaccagtgcctggg
ttgggtgattctttgtatag
gaattccttaggctcctttgttggccagtttagccaaagtggcaagttcc
tcgttcactgtcttaaataaaaataattgaggatgatacctgacattaac
atttgcccctccatgtgcacaggtatgcatatgtacgtgcacataaatga
gcatgtgtacacatatggccatacagacagacactaacatggatggacac
agaatgttattgaatgtttgatgtgaaagtgtgagattaagcattctttt
ctgtatttgattatgtatatttcttttctttgtaaattatccattcaagt
tattcattcatttgtttttctttgtaccagtttgaattttaagtgtagtt
tgaatttcaagtccttttggcatatgcattgcaccttattgctagtttat
gccttatattttaattttgttgttgttgtttgagacattatttctctgtg
tagctctggatgtcctgcctctggatagcctgcctctgccctcccacttg
ctgggtgctgggattaaaggcatgtgctataccacccagatgtattcatt
ttcttaatgatcttttctgcagaataaaattctattttatacatgataaa
tatctatgaaatatctatttcatagatattttttcatgatgtgtaagagt
tcattgactcttcctataatactaagatctttttcttcttaaaaaaatat
ttattgtttacattctaaatttaaaaatagttttctgcccaagtattaga
gcagttaatatgaattacattatttaaatttttaatttcaatgtcaaatc
tttcatttttattatgtaatttacctgttttgtgtgcatatcttatgaac
tttgtattctataacatttgtagttttgcctatttgagtgtttggatttt
ttttttttgaaaaattcttgagattttttttgttgtttcgctatacaact
attcccatataggggaatttattatttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66911298_66912281
seq2: B6Ng01-037M07.g_70_1048

seq1  GAATTCCTTAGGCTCCTTTGTTGGCCAGTTTAGCCAAAGTGGCAAGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGGCTCCTTTGTTGGCCAGTTTAGCCAAAGTGGCAAGTTCC  50

seq1  TCGTTCACTGTCTTAAATAAAAATAATTGAGGATGATACCTGACATTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCACTGTCTTAAATAAAAATAATTGAGGATGATACCTGACATTAAC  100

seq1  ATTTGCCCCTCCATGTGCACAGGTATGCATATGTACGTGCACATAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCCCTCCATGTGCACAGGTATGCATATGTACGTGCACATAAATGA  150

seq1  GCATGTGTACACATATGGCCATACAGACAGACACTAACATGGATGGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTACACATATGGCCATACAGACAGACACTAACATGGATGGACAC  200

seq1  AGAATGTTATTGAATGTTTGATGTGAAAGTGTGAGATTAAGCATTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTATTGAATGTTTGATGTGAAAGTGTGAGATTAAGCATTCTTTT  250

seq1  CTGTATTTGATTATGTATATTTCTTTTCTTTGTAAATTATCCATTCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTGATTATGTATATTTCTTTTCTTTGTAAATTATCCATTCAAGT  300

seq1  TATTCATTCATTTGTTTTTCTTTGTACCAGTTTGAATTTTAAGTGTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTCATTTGTTTTTCTTTGTACCAGTTTGAATTTTAAGTGTAGTT  350

seq1  TGAATTTCAAGTCCTTTTGGCATATGCATTGCACCTTATTGCTAGTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCAAGTCCTTTTGGCATATGCATTGCACCTTATTGCTAGTTTAT  400

seq1  GCCTTATATTTTAATTTTGTTGTTGTTGTTTGAGACATTATTTCTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATATTTTAATTTTGTTGTTGTTGTTTGAGACATTATTTCTCTGTG  450

seq1  TAGCTCTGGATGTCCTGCCTCTGGATAGCCTGCCTCTGCCCTCCCACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGGATGTCCTGCCTCTGGATAGCCTGCCTCTGCCCTCCCACTTG  500

seq1  CTGGGTGCTGGGATTAAAGGCATGTGCTATACCACCCAGATGTATTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGCTGGGATTAAAGGCATGTGCTATACCACCCAGATGTATTCATT  550

seq1  TTCTTAATGATCTTTTCTGCAGAATAAAATTCTATTTTATACATGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATGATCTTTTCTGCAGAATAAAATTCTATTTTATACATGATAAA  600

seq1  TATCTATGAAATATCTATTTCATAGATATTTTTTCATGATGTGTAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATGAAATATCTATTTCATAGATATTTTTTCATGATGTGTAAGAGT  650

seq1  TCATTGACTCTTCCTATAATACTAAGATCTTTTTCTTCTTAAAAAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACTCTTCCTATAATACTAAGATCTTTTTCTTCTTAAAAAAATAT  700

seq1  TTATTGTTTACATTCTAAATTTAAAAATAGTTTTCTGCCCAAGTATTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTTACATTCTAAATTTAAAAATAGTTTTCTGCCCAAGTATTAGA  750

seq1  GCAGTTAATATGAATTACATTATTTAAATTTTTAATTTCAATGTCAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAATATGAATTACATTATTTAAATTTTTAATTTCAATGTCAAATC  800

seq1  TTTCATTTTTATTATGTAATTTACCTGTTTTGTGTGCATATCTTATGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTTATTATGTAATTTACCTGTTTTGTGTGCATATCTTATGAAC  850

seq1  TTTGTATTCTATAACATTTGTAGTTTTGCCTATTTGAGTGTTTGGATTTT  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTGTATTCTATAACATTTGTAGTTTTGCCTATTTGAGTGTTTGGA-TTT  899

seq1  TTTTTTTTTGATAAAATTCTTGAGGATTTTTTTGTTGTTATCGACTATAC  950
      ||||||||||| ||||||||||||  ||||||||||||| ||| ||||||
seq2  TTTTTTTTTGA-AAAATTCTTGAGATTTTTTTTGTTGTT-TCG-CTATAC  946

seq1  AACTATTCGCATATAGGGTATTTTATTTATTTAT  984
      |||||||| ||||||||| | |||| ||||||||
seq2  AACTATTCCCATATAGGGGAATTTA-TTATTTAT  979