BAC Information

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BAC

Clone NameB6Ng01-037P17
Chromosome3 (Build37)
Map Location 141,699,713 - 141,876,975
singlet/doubletdoublet
Overlap geneGabarapl2-ps3
Upstream genePdha2, Unc5c, LOC100039923, Bmpr1b
Downstream genePdlim5, Gbp5, Gbp6, Gbp3, Gbp1, Gbp2, EG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037P17.bB6Ng01-037P17.g
ACCDH865685DH865686
length1,072771
definitionDH865685|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P17, 5' end.DH865686|Mus musculus domesticus DNA, BAC clone: B6Ng01-037P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,699,713 - 141,700,790)(141,876,384 - 141,876,975)
sequence
gaattctgcacagccaatggcctgcccactgctccctctcttcccagaca
tctgtgctagatactctgtgttcatcccaggtaggccgaagcaaaatgcc
aaatgctctcttgcaaaactcagtaccaagtatcttctgacagattaaag
agacaaccaaccccaggccaggtgtttaaggccggttacatggtattttc
ttcatgtgaaaatacaaggcctgctattccagagtttgtctctaccacct
cgcatccttggaccaccttaaaagcatctaggccatctcagtcttttgtc
cacctcttcctaccttcagattacctctctctatataataaagtcaaact
tgggttccttcataatctcagacaccgattcctttgagattttatgtttc
ctttttgacctcaggctctgaacatctctgaatcctcacacagcctgtgc
tttatgtaatccctgtgtgatatcttgaatattgcttatttttactattg
ccttatgcgttaataatctgttggctccaccaggagaaaaatgtgccaca
gttatttctcatccagaggtgcccgaggatttgatcatggcaaatactca
gtgtttgttgaatttaactaaaatgttaatgtgttcctgcaggtttacag
ccaaatcaattcgtcagtgacccactaggaatgaacaaactggtctgctc
acaatagctgaaactgtcttctccataatcacagcctatggcgtgtactg
tgtccagaacatatgtgttcaccaattattgtcgacgtaactttaagaat
tctgagaaaatggattatacataaataacttttgatcttgagaaaagaaa
cacattttgtaaaagtaacccttacatcctaaaatgggccaaaaatagcc
ttaagctttcaaagcaacatgaaatggcttaattgcattttaaaaattaa
tttaaaaaggccagaacattaattagagataatctgtcttccttaagttg
tctcttggattttcactaggcacaccatttaaagatactgtttttcacta
ggtttataaactgcaaaagcaa
gaattcattttcatacagcttgcttcaagtattgttccactcaaaacttc
acaacattttcacatttggtttcttctctgaccctaaaatcatctagaaa
taatttctccaaactttagaaccccggtgatctccttatttttgatacat
aacttaatttctagtgattatgatttgagaactactctgtgttgaatttc
aattcactgaagtaagattcactttgtggctaatcatgtttattagttat
aaatctattgtattcttgaaaaagatctgtgttgtgcattcttatggtta
tttatatgtatgaatgtgtgcatctatatatcagtttatatttgtatgta
tatatgctttgtggcaaattttctaatcacgttgcatgtatttcagaggt
atcaatcactcatgaaactgtcattttatgttactatggtttcttttaat
gttgtcactttgctttatctctttgaaactacctatggagtacatacaat
tttaaaaccactatatattttttgaaaagttaattatgtgtgctttgctg
tcattaagttactgcataaacatctactgatttttttccttaatgtgcaa
tcattataaaatagcttgggaaactgcaaatataatttccccagctaact
gaagatgatatgaaagcatgggttttactattggtatctcagcttattgt
gagtgggagatacctgtggggtatgtgtgtgtgtgtatacatgtatatac
atacatgtgtgtgctatttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_141699713_141700790
seq2: B6Ng01-037P17.b_47_1118

seq1  GAATTCTGCACAGCCAATGGCCTGCCCACTGCTCCCTCTCTTCCCAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCACAGCCAATGGCCTGCCCACTGCTCCCTCTCTTCCCAGACA  50

seq1  TCTGTGCTAGATACTCTGTGTTCATCCCAGGTAGGCCGAAGCAAAATGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTAGATACTCTGTGTTCATCCCAGGTAGGCCGAAGCAAAATGCC  100

seq1  AAATGCTCTCTTGCAAAACTCAGTACCAAGTATCTTCTGACAGATTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCTCTTGCAAAACTCAGTACCAAGTATCTTCTGACAGATTAAAG  150

seq1  AGACAACCAACCCCAGGCCAGGTGTTTAAGGCCGGTTACATGGTATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACCAACCCCAGGCCAGGTGTTTAAGGCCGGTTACATGGTATTTTC  200

seq1  TTCATGTGAAAATACAAGGCCTGCTATTCCAGAGTTTGTCTCTACCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGAAAATACAAGGCCTGCTATTCCAGAGTTTGTCTCTACCACCT  250

seq1  CGCATCCTTGGACCACCTTAAAAGCATCTAGGCCATCTCAGTCTTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCCTTGGACCACCTTAAAAGCATCTAGGCCATCTCAGTCTTTTGTC  300

seq1  CACCTCTTCCTACCTTCAGATTACCTCTCTCTATATAATAAAGTCAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTTCCTACCTTCAGATTACCTCTCTCTATATAATAAAGTCAAACT  350

seq1  TGGGTTCCTTCATAATCTCAGACACCGATTCCTTTGAGATTTTATGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCTTCATAATCTCAGACACCGATTCCTTTGAGATTTTATGTTTC  400

seq1  CTTTTTGACCTCAGGCTCTGAACATCTCTGAATCCTCACACAGCCTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGACCTCAGGCTCTGAACATCTCTGAATCCTCACACAGCCTGTGC  450

seq1  TTTATGTAATCCCTGTGTGATATCTTGAATATTGCTTATTTTTACTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTAATCCCTGTGTGATATCTTGAATATTGCTTATTTTTACTATTG  500

seq1  CCTTATGCGTTAATAATCTGTTGGCTCCACCAGGAGAAAAATGTGCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGCGTTAATAATCTGTTGGCTCCACCAGGAGAAAAATGTGCCACA  550

seq1  GTTATTTCTCATCCAGAGGTGCCCGAGGATTTGATCATGGCAAATACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTCTCATCCAGAGGTGCCCGAGGATTTGATCATGGCAAATACTCA  600

seq1  GTGTTTGTTGAATTTAACTAAAATGTTAATGTGTTCCTGCAGGTTTACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTTGAATTTAACTAAAATGTTAATGTGTTCCTGCAGGTTTACAG  650

seq1  CCAAATCAATTCGTCAGTGACCCACTAGGAATGAACAAACTGGTCTGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCAATTCGTCAGTGACCCACTAGGAATGAACAAACTGGTCTGCTC  700

seq1  ACAATAGCTGAAACTGTCTTCTCCATAATCACAGCCTATGGCGTGTACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGCTGAAACTGTCTTCTCCATAATCACAGCCTATGGCGTGTACTG  750

seq1  TGTCCAGAACATATGTGTTCACCAATTATTGTCGACGTAAC-TTAAGAAT  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGTCCAGAACATATGTGTTCACCAATTATTGTCGACGTAACTTTAAGAAT  800

seq1  TCTGAGAAAATGGATTATACATAAATAACTTTTGATCTTGAGAAAAGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAAATGGATTATACATAAATAACTTTTGATCTTGAGAAAAGAAA  850

seq1  CACATTTTGTAAAAGTAACCCTTACAATCCTAAAATGGGCCAAAAAATAG  899
      ||||||||||||||||||||||||| ||||||||||||||| ||||||||
seq2  CACATTTTGTAAAAGTAACCCTTAC-ATCCTAAAATGGGCC-AAAAATAG  898

seq1  CCTTAAGCTTTCAAAGCAACATGAAATGGCTTAAATTGCATTTTTAAAAA  949
      |||||||||||||||||||||||||||||||| |||||||||||  ||||
seq2  CCTTAAGCTTTCAAAGCAACATGAAATGGCTT-AATTGCATTTT--AAAA  945

seq1  ATAAATTAAAAAGGGCCAGAACATTAATTAGAGATAATCTGTCTTCCTTA  999
      || |||| |||| |||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTAAAAAGGCCAGAACATTAATTAGAGATAATCTGTCTTCCTTA  995

seq1  AGTTGTCTCTTGGATTTTCACCTAGGCACACCATTTAAAGATACTG-TTT  1048
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  AGTTGTCTCTTGGATTTTCA-CTAGGCACACCATTTAAAGATACTGTTTT  1044

seq1  TCACTATGTTTATAAAACTGCAAAAAGCAA  1078
      |||||| |||||| ||||||| ||||||||
seq2  TCACTAGGTTTAT-AAACTGC-AAAAGCAA  1072

seq1: chr3_141876384_141876975
seq2: B6Ng01-037P17.g_244_837 (reverse)

seq1  ACAAATAGCACACACATGTATGTATATACATGTATACACACACACACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGCACACACATGTATGTATATACATGTATACACACACACACATA  50

seq1  CCCCACAGGTATCT-CCACTCACAATAAGCTGAGATACCAATAGT-AAAC  98
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  CCCCACAGGTATCTCCCACTCACAATAAGCTGAGATACCAATAGTAAAAC  100

seq1  CCATGCTTTCATATCATCTTCAGTTAGCTGGGGAAATTATATTTGCAGTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTTCATATCATCTTCAGTTAGCTGGGGAAATTATATTTGCAGTT  150

seq1  TCCCAAGCTATTTTATAATGATTGCACATTAAGGAAAAAAATCAGTAGAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTATTTTATAATGATTGCACATTAAGGAAAAAAATCAGTAGAT  200

seq1  GTTTATGCAGTAACTTAATGACAGCAAAGCACACATAATTAACTTTTCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGCAGTAACTTAATGACAGCAAAGCACACATAATTAACTTTTCAA  250

seq1  AAAATATATAGTGGTTTTAAAATTGTATGTACTCCATAGGTAGTTTCAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATATAGTGGTTTTAAAATTGTATGTACTCCATAGGTAGTTTCAAA  300

seq1  GAGATAAAGCAAAGTGACAACATTAAAAGAAACCATAGTAACATAAAATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAGCAAAGTGACAACATTAAAAGAAACCATAGTAACATAAAATG  350

seq1  ACAGTTTCATGAGTGATTGATACCTCTGAAATACATGCAACGTGATTAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCATGAGTGATTGATACCTCTGAAATACATGCAACGTGATTAGA  400

seq1  AAATTTGCCACAAAGCATATATACATACAAATATAAACTGATATATAGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGCCACAAAGCATATATACATACAAATATAAACTGATATATAGAT  450

seq1  GCACACATTCATACATATAAATAACCATAAGAATGCACAACACAGATCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACATTCATACATATAAATAACCATAAGAATGCACAACACAGATCTT  500

seq1  TTTCAAGAATACAATAGATTTATAACTAATAAACATGATTAGCCACAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAATACAATAGATTTATAACTAATAAACATGATTAGCCACAAAG  550

seq1  TGAATCTTACTTCAGTGAATTGAAATTCAACACAGAGTAGTTCT  592
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTACTTCAGTGAATTGAAATTCAACACAGAGTAGTTCT  594