BAC Information

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BAC

Clone NameB6Ng01-038E18
Chromosome3 (Build37)
Map Location 143,950,465 - 143,951,649
singlet/doubletsinglet
Overlap genenone
Upstream gene1700001N15Rik, EG668889, EG621809, LOC100039938, LOC100039952, Lmo4
Downstream geneLOC545572, Hs2st1, Sep15, LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038E18.bB6Ng01-038E18.g
ACCDH865897DH865898
length1,157860
definitionDH865897|Mus musculus domesticus DNA, BAC clone: B6Ng01-038E18, 5' end.DH865898|Mus musculus domesticus DNA, BAC clone: B6Ng01-038E18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacttgaagtcatttcgttctgtacctttcaacaccaatgggc
ttcatgaaacactatgtttgtctgatctgcaacataatttccaaaacgac
caaccaaagagaaaaagcagggcttcccggtggcagccaacgttcccttc
taactgaggaagttaagctaagacaggcttgcagccatgtcagtttctga
gacctaaataaatgtgccttatagacacaagtgtgaggatttagatgcta
agtctaaaaatgttaccaggcattaggcacttcctatcccaaattgctca
aacctagcagaatggctcccaacagagcctttgggatttgatgtcagtct
gccatttgtgattatcatatcaaatattttgatggttgaaactgtcaact
tgacagaatctagagccacccaggagcaaactgtatgactccactgtgag
gggttatctagactaatctagcctctgaccacacctgcacaggtgcatct
tgttaggctaactgaagtgggcaaacccaacctaaaagtgggtggtgcca
tcgcctgggctaaggtcctgggcatagaggagaaagaacgctgagcatca
ttcattgcccctgtcttcctggctggggacacaatgtgaccgtcctcttc
aagcttttcagcccgtcttacctgccacaatagacgagatcccaaaaaca
tgagcccaagcaagtctttttcattcttgcttttgtcaaggaattttgtc
aaggcaacaaggatagatgtgagccggcattctacagcagcggtaggaaa
agacatgtgagaaatccatgtgtcgtgtccatgtggaggaggtgagcgag
aatcccagccacttaactgacacctgcgccttgctaacctaggactcaga
gtaatgtctctctgctcacggggttttgcaatggcttctctgtacaaagc
ttagtcacctcttctctgagtccttggctgagtctaaccgtcagcttcct
ctctgactttgcaactcccactagcagactcctagtgactttacaaatcc
ttgcccacagtgtctgatgccaggtctgcaacatcaaactggtttagcca
caaactcctttttgatttctgctaatcattcttacctctatcatataatc
ctacttg
gaattcactttgtagaccaggctggcctcgaactcagaaatctgcctgcc
tctgcctcccgagtgctgggattaaaggcgtgcgccaccacgcccggcta
taaatagaattcttaaagtcttgggtctattttatagtgctaatttgggg
gagggggatcctataagacttgcgtccatcagattggccttcggtaagtg
tgtagggcattttcttgaatgacgtagaagggcccagtttgtgtgtggtt
ccaccctgggctggggagtcctggggaaataagaaagcaggctgagcagc
atgggagcaagctggtgcggtgccgtggggtgccttgcgcagcgctcctc
ctgcatcggatttagctcctgcctccagggtccaccttgatttcctgccc
caacttccctcagtgacaggttacaacatggaactgtgagccaataaact
acttccctgaaacagaaaacaagcaaagacagttggcttttctcttctct
cttttctttcttcctttcttttttttctcttttggaatcactgttctaat
ttgatgtactagttcctgtggctagaaatgaaataatccaaattgagcaa
acattttctctacctggaagtctcagctgatggctgataggccatgatag
gccacagtcagtgtgaatgggcagtgtgagcagaacaaataaagtctgcc
cttccctcccctgcctgcctcccttccttccctcttcttcctctcttccc
ccctccctttgttacttcctctctccttccctccctttccacccctcttt
tcctctcagataatctcactgctgtgttgtctggggctggcctgaaaccc
tatgttcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_143950465_143951649
seq2: B6Ng01-038E18.b_48_1204

seq1  GAATTCTCACTTGAAGTCATTTCGTTCTGTACCTTTCAACACCAATGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTTGAAGTCATTTCGTTCTGTACCTTTCAACACCAATGGGC  50

seq1  TTCATGAAACACTATGTTTGTCTGATCTGCAACATAATTTCCAAAACGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAACACTATGTTTGTCTGATCTGCAACATAATTTCCAAAACGAC  100

seq1  CAACCAAAGAGAAAAAGCAGGGCTTCCCGGTGGCAGCCAACGTTCCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAAGAGAAAAAGCAGGGCTTCCCGGTGGCAGCCAACGTTCCCTTC  150

seq1  TAACTGAGGAAGTTAAGCTAAGACAGGCTTGCAGCCATGTCAGTTTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGGAAGTTAAGCTAAGACAGGCTTGCAGCCATGTCAGTTTCTGA  200

seq1  GACCTAAATAAATGTGCCTTATAGACACAAGTGTGAGGATTTAGATGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAATAAATGTGCCTTATAGACACAAGTGTGAGGATTTAGATGCTA  250

seq1  AGTCTAAAAATGTTACCAGGCATTAGGCACTTCCTATCCCAAATTGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAAATGTTACCAGGCATTAGGCACTTCCTATCCCAAATTGCTCA  300

seq1  AACCTAGCAGAATGGCTCCCAACAGAGCCTTTGGGATTTGATGTCAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGCAGAATGGCTCCCAACAGAGCCTTTGGGATTTGATGTCAGTCT  350

seq1  GCCATTTGTGATTATCATATCAAATATTTTGATGGTTGAAACTGTCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTGTGATTATCATATCAAATATTTTGATGGTTGAAACTGTCAACT  400

seq1  TGACAGAATCTAGAGCCACCCAGGAGCAAACTGTATGACTCCACTGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAATCTAGAGCCACCCAGGAGCAAACTGTATGACTCCACTGTGAG  450

seq1  GGGTTATCTAGACTAATCTAGCCTCTGACCACACCTGCACAGGTGCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATCTAGACTAATCTAGCCTCTGACCACACCTGCACAGGTGCATCT  500

seq1  TGTTAGGCTAACTGAAGTGGGCAAACCCAACCTAAAAGTGGGTGGTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGCTAACTGAAGTGGGCAAACCCAACCTAAAAGTGGGTGGTGCCA  550

seq1  TCGCCTGGGCTAAGGTCCTGGGCATAGAGGAGAAAGAACGCTGAGCATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTGGGCTAAGGTCCTGGGCATAGAGGAGAAAGAACGCTGAGCATCA  600

seq1  TTCATTGCCCCTGTCTTCCTGGCTGGGGACACAATGTGACCGTCCTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGCCCCTGTCTTCCTGGCTGGGGACACAATGTGACCGTCCTCTTC  650

seq1  AAGCTTTTCAGCCCGTCTTACCTGCCACAATAGACGAGATCCCAAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTCAGCCCGTCTTACCTGCCACAATAGACGAGATCCCAAAAACA  700

seq1  TGAGCCCAAGCAAGTCTTTTTCATTCTTGCTTTTGTCAAGGAATTTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCAAGCAAGTCTTTTTCATTCTTGCTTTTGTCAAGGAATTTTGTC  750

seq1  AAGGCAACAAGGATAGATGTGAGCCGGCATTCTACAGCAGCGGTAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAACAAGGATAGATGTGAGCCGGCATTCTACAGCAGCGGTAGGAAA  800

seq1  AGACATGTGAGAAATCCATGTGTCGTGTCCATGTGGAGGAGGTGAGCGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTGAGAAATCCATGTGTCGTGTCCATGTGGAGGAGGTGAGCGAG  850

seq1  AATCCCAGCCACTTAACTGACACCTGCGCCTTGCTAACCTAGGACTCAGG  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATCCCAGCCACTTAACTGACACCTGCGCCTTGCTAACCTAGGACTCA-G  899

seq1  AGTAATGTCTCTCTGCTCACGGGGTTTTGCAATGGCTTCTCTGTACAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTCTCTCTGCTCACGGGGTTTTGCAATGGCTTCTCTGTACAAAG  949

seq1  CTTTAGTCACCTCTTCTCTGAGTCCTTGGCTGAGTCTAACCGTCAGCTTC  1000
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  C-TTAGTCACCTCTTCTCTGAGTCCTTGGCTGAGTCTAACCGTCAGCTT-  997

seq1  CCTCTCTGACTTTGCAAACTCCCACCTAAGCAAGACTCCTAAGTGACTTT  1050
      ||||||||||||||| |||||||||   ||| |||||||| |||||||||
seq2  CCTCTCTGACTTTGC-AACTCCCAC--TAGC-AGACTCCT-AGTGACTTT  1042

seq1  AACAAAATCCTTGCCCACAGTGTCTGAGTGCCCAGGTCTGGCCAACATCA  1100
      |   ||||||||||||||||||||||| || |||||||||  ||||||||
seq2  A--CAAATCCTTGCCCACAGTGTCTGA-TG-CCAGGTCTG--CAACATCA  1086

seq1  AACTGGTTTAGCCACAAACTCCCTTTTTCTGATTTTCCTGCCTAAATCAT  1150
      ||||||||||||||||||||||   ||| ||||||  ||||   ||||||
seq2  AACTGGTTTAGCCACAAACTCC---TTTTTGATTT--CTGC--TAATCAT  1129

seq1  TTCTTTACACTCTATCATATATAAATCTCTACTTG  1185
      |   |||| |||||||||||   |||| |||||||
seq2  T--CTTAC-CTCTATCATAT---AATC-CTACTTG  1157