BAC Information

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BAC

Clone NameB6Ng01-038L23
Chromosome3 (Build37)
Map Location 56,063,978 - 56,064,925
singlet/doubletsinglet
Overlap genenone
Upstream geneDclk1, Mab21l1, 4933417G07Rik
Downstream geneLOC100040139, LOC666585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038L23.bB6Ng01-038L23.g
ACCDH866215DH866216
length9481,151
definitionDH866215|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L23, 5' end.DH866216|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagacaaatgcaatgtaagggagaagtggtttatctggattgac
attggggagcacagtccatcacaacccgacagacatggcggcaggaccat
gaaatagctgttcacattacactcacaatctcgaaggtgagagagttgaa
ttttggtccttcactatctctttcctttttatacaatcctagatctcagc
ccaagatttaactgcaacaaatgtgttagctaaagccagggttctgtaat
ggacaggattttcacaaagcaaagaacctataaggatgcctccatgatta
aagcactttttgttcctgcagaggacacagattcagttcccagcacccac
atgatggcatgaaatcacctgtaactgcagttccagggaactgatgccct
cttctggcctcacagggcactaggtacccacatgttacacatagatgtat
acaggcaaaatacttatacatataaaataaaaataaacaaatctaactgg
aaaaaaagaaccttcagggctccaggaaaatagttctacagtgacatcat
ggtgggtgaagaggctggcagtctgaaagcaaagtatttttcatcactgt
gtagctgcatctaacttaaagcgacataactaacctttctacgccttcat
ctctccatctttaaaatggcctaagagaaatggttgtggagagtctaaga
aataatgcccttaacacagcatctggcagtgaggtgttataaatgttaca
cactgtgtacagcctcattctgtttttattttatctgtttgaacattaga
acatatctcctctcttctttctctgatcagctagaagttatactaggcat
acatatactttaacatttttctcatgattttttattcttcttatagttga
agaatgttggaataaaagatatatatatatgtgtgtgtgtgtgtgtgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcgctattggatggatcacatggcccccaa
tgaagagctagagaaagtaccaaagaagctaaggatctgcaaccctatag
tggaacaacattatgaactaaccagtaccccggagctcttgactctagct
gcatattgcatcaaagatggcttgtcgcatcactgaaagaaggccatgac
cgcaacttatgtccagtacaggaacgcaggccataagtatgtggttagca
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56063978_56064925
seq2: B6Ng01-038L23.b_45_992 (reverse)

seq1  ACACACACACACACACACATATATATATATCTTTTATTCCAACATTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACATATATATATATCTTTTATTCCAACATTCTTC  50

seq1  AACTATAAGAAGAATAAAAAATCATGAGAAAAATGTTAAAGTATATGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAAGAAGAATAAAAAATCATGAGAAAAATGTTAAAGTATATGTAT  100

seq1  GCCTAGTATAACTTCTAGCTGATCAGAGAAAGAAGAGAGGAGATATGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTATAACTTCTAGCTGATCAGAGAAAGAAGAGAGGAGATATGTTC  150

seq1  TAATGTTCAAACAGATAAAATAAAAACAGAATGAGGCTGTACACAGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAAACAGATAAAATAAAAACAGAATGAGGCTGTACACAGTGTG  200

seq1  TAACATTTATAACACCTCACTGCCAGATGCTGTGTTAAGGGCATTATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTATAACACCTCACTGCCAGATGCTGTGTTAAGGGCATTATTTC  250

seq1  TTAGACTCTCCACAACCATTTCTCTTAGGCCATTTTAAAGATGGAGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTCTCCACAACCATTTCTCTTAGGCCATTTTAAAGATGGAGAGAT  300

seq1  GAAGGCGTAGAAAGGTTAGTTATGTCGCTTTAAGTTAGATGCAGCTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCGTAGAAAGGTTAGTTATGTCGCTTTAAGTTAGATGCAGCTACAC  350

seq1  AGTGATGAAAAATACTTTGCTTTCAGACTGCCAGCCTCTTCACCCACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAAAAATACTTTGCTTTCAGACTGCCAGCCTCTTCACCCACCAT  400

seq1  GATGTCACTGTAGAACTATTTTCCTGGAGCCCTGAAGGTTCTTTTTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCACTGTAGAACTATTTTCCTGGAGCCCTGAAGGTTCTTTTTTTCC  450

seq1  AGTTAGATTTGTTTATTTTTATTTTATATGTATAAGTATTTTGCCTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGATTTGTTTATTTTTATTTTATATGTATAAGTATTTTGCCTGTAT  500

seq1  ACATCTATGTGTAACATGTGGGTACCTAGTGCCCTGTGAGGCCAGAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATGTGTAACATGTGGGTACCTAGTGCCCTGTGAGGCCAGAAGAG  550

seq1  GGCATCAGTTCCCTGGAACTGCAGTTACAGGTGATTTCATGCCATCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGTTCCCTGGAACTGCAGTTACAGGTGATTTCATGCCATCATGT  600

seq1  GGGTGCTGGGAACTGAATCTGTGTCCTCTGCAGGAACAAAAAGTGCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGGGAACTGAATCTGTGTCCTCTGCAGGAACAAAAAGTGCTTTA  650

seq1  ATCATGGAGGCATCCTTATAGGTTCTTTGCTTTGTGAAAATCCTGTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGAGGCATCCTTATAGGTTCTTTGCTTTGTGAAAATCCTGTCCAT  700

seq1  TACAGAACCCTGGCTTTAGCTAACACATTTGTTGCAGTTAAATCTTGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACCCTGGCTTTAGCTAACACATTTGTTGCAGTTAAATCTTGGGC  750

seq1  TGAGATCTAGGATTGTATAAAAAGGAAAGAGATAGTGAAGGACCAAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCTAGGATTGTATAAAAAGGAAAGAGATAGTGAAGGACCAAAATT  800

seq1  CAACTCTCTCACCTTCGAGATTGTGAGTGTAATGTGAACAGCTATTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTCACCTTCGAGATTGTGAGTGTAATGTGAACAGCTATTTCAT  850

seq1  GGTCCTGCCGCCATGTCTGTCGGGTTGTGATGGACTGTGCTCCCCAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGCCGCCATGTCTGTCGGGTTGTGATGGACTGTGCTCCCCAATGT  900

seq1  CAATCCAGATAAACCACTTCTCCCTTACATTGCATTTGTCTGGAATTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAGATAAACCACTTCTCCCTTACATTGCATTTGTCTGGAATTC  948