BAC Information

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BAC

Clone NameB6Ng01-039O22
Chromosome3 (Build37)
Map Location 14,376,217 - 14,478,888
singlet/doubletdoublet
Overlap geneEG622229, LOC668062
Upstream geneLOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
Downstream geneSlc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039O22.bB6Ng01-039O22.g
ACCDH867057DH867058
length9871,129
definitionDH867057|Mus musculus domesticus DNA, BAC clone: B6Ng01-039O22, 5' end.DH867058|Mus musculus domesticus DNA, BAC clone: B6Ng01-039O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,478,356 - 14,478,888)(14,376,217 - 14,377,357)
sequence
gaattctccagtcaagtgcatttttctacaagttaaacattactacagct
tacctactttctcttagttgatatacatgactgaagggtgaagaaccctc
atcattgtaatgtgaattggttaactgctgttctggcttctgccagtcaa
aacagtattattcagcagtgaaagtcttaggcagttacaattgcttttct
tttgcttttttttaaattcttttttattattattattaggtattttcctc
gtttacattttcaatgctatcccaaaggtcccccatacccacccccccaa
tcccctacccacccattccccctttttggccctggcgttcccctgtactg
gggcatataaagtttgcaagtccaatgggcctctctttgcagtgatggcc
gactaggcaatcttttgatacgtatgcagctaaagacaagagctcccagg
tactggttagttcatattgttgttccacctatagggttgcagatcccttt
agctccttgagtaatttctctagctcctccattgggggccgtgtgaccca
tccaatagctgtgatcatccacttctgtgtttgctaggccccggcatagt
ctcacaagagagagctatatctgggtcctttcagcaaaatcttgctagtg
tatgcaatggtgtcagcatttggaagctgattatgggatggatccctgca
tatggcaatcactacatggtccatcctttcgtcacagctccaaattttgt
ctctgtaacaccttccatgggtgttttgttcccatttctaagaaagggta
aagtgttcacactttggtcttcgttcttgaatttcatgcgtttggcaagt
tgtatcttatatcttgggtatcctaagtttctgggctaatatccacttaa
cagtgagtacatattgtgcgaggtcctttgtgattgggttacttcacaca
gatgatatcctccaggtccatccatttgcctagaatt
gaattccttctttccaatttgtatccccttgatctccttttgttgtcgaa
ttgctctggctaggacttcaagtattatatttaatagggaaggagaaagt
gggcatataggcttattttattttctgatctcaacatcaaaaatatgtgt
gactctccagaacaaattctttccttgttccttgtgattgttgctttcac
atcaacaaaatacttctgaactaattttattcttttatatattttcctta
atcttcctcatttcctttttatttattcagttgctgtgttcacttatttt
atccatgtgtaatgaaagccaaatattctatgacgtcccatagtctttgc
tttatgcattaaccatgaaatgaatgtggtaaaaatgacccatttttaga
tactgcattatgtgaaaatgttgtgatcagtaaactagaatcccaggcct
cttggcaaccattattatatgcactaagtactcttactggaatttgagtg
gtggatttattaagtagtcaaagatttgaaactgggacagtaaaaataag
tttccatgaaaggaacttactttatctaaacaaaagacagtaggcaaaac
attagaatcatttaattaatatttcaggtatgaataataaagataacaac
acacttatttatgaatccagggttttttaattcataaggtttttttataa
tgatactctgatttaaaattgtattatgaatgaatactcggttatgacat
agctgagtgtctttattcctcaagtcagaaaagtcagcaactattgagct
gatgtttattagttcagtattggctaatgtaaatgatgtatttctgtatg
tgcttcactcttcttcatgcaaacgcattgatttcaatgagtaagttgga
aaccctgtaaatagtggaagatccatcgaaacttagcaaaatagctggat
taattctgtggtttcacaacttgccagttgcaaagtaaatatcagtacta
caaggtagtactgagactgtatccatccttgccctttgctctgaaatttg
taattgtggtatggctgtaagaccgaaaacaatcacccactaatcttaag
gttcttttacttcagatgcccgccattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14478356_14478888
seq2: B6Ng01-039O22.b_45_577 (reverse)

seq1  AATGGAGGAGCTAGAGAAATTACTCAAGGAGCTAAAGGGATCTGCAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGAGCTAGAGAAATTACTCAAGGAGCTAAAGGGATCTGCAACCC  50

seq1  TATAGGTGGAACAACAATATGAACTAACCAGTACCTGGGAGCTCTTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGGAACAACAATATGAACTAACCAGTACCTGGGAGCTCTTGTCT  100

seq1  TTAGCTGCATACGTATCAAAAGATTGCCTAGTCGGCCATCACTGCAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGCATACGTATCAAAAGATTGCCTAGTCGGCCATCACTGCAAAGA  150

seq1  GAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCC  200

seq1  AGGGCCAAAAAGGGGGAATGGGTGGGTAGGGGATTGGGGGGGTGGGTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCAAAAAGGGGGAATGGGTGGGTAGGGGATTGGGGGGGTGGGTATG  250

seq1  GGGGACCTTTGGGATAGCATTGAAAATGTAAACGAGGAAAATACCTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCTTTGGGATAGCATTGAAAATGTAAACGAGGAAAATACCTAATA  300

seq1  ATAATAATAAAAAAGAATTTAAAAAAAAGCAAAAGAAAAGCAATTGTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAAAAAAGAATTTAAAAAAAAGCAAAAGAAAAGCAATTGTAAC  350

seq1  TGCCTAAGACTTTCACTGCTGAATAATACTGTTTTGACTGGCAGAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAAGACTTTCACTGCTGAATAATACTGTTTTGACTGGCAGAAGCCA  400

seq1  GAACAGCAGTTAACCAATTCACATTACAATGATGAGGGTTCTTCACCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCAGTTAACCAATTCACATTACAATGATGAGGGTTCTTCACCCTT  450

seq1  CAGTCATGTATATCAACTAAGAGAAAGTAGGTAAGCTGTAGTAATGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATGTATATCAACTAAGAGAAAGTAGGTAAGCTGTAGTAATGTTTA  500

seq1  ACTTGTAGAAAAATGCACTTGACTGGAGAATTC  533
      |||||||||||||||||||||||||||||||||
seq2  ACTTGTAGAAAAATGCACTTGACTGGAGAATTC  533

seq1: chr3_14376217_14377357
seq2: B6Ng01-039O22.g_68_1196

seq1  GAATTCCTTCTTTCCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTTCCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAA  50

seq1  TTGCTCTGGCTAGGACTTCAAGTATTATATTTAATAGGGAAGGAGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGGCTAGGACTTCAAGTATTATATTTAATAGGGAAGGAGAAAGT  100

seq1  GGGCATATAGGCTTATTTTATTTTCTGATCTCAACATCAAAAATATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAGGCTTATTTTATTTTCTGATCTCAACATCAAAAATATGTGT  150

seq1  GACTCTCCAGAACAAATTCTTTCCTTGTTCCTTGTGATTGTTGCTTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCCAGAACAAATTCTTTCCTTGTTCCTTGTGATTGTTGCTTTCAC  200

seq1  ATCAACAAAATACTTCTGAACTAATTTTATTCTTTTATATATTTTCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAAAATACTTCTGAACTAATTTTATTCTTTTATATATTTTCCTTA  250

seq1  ATCTTCCTCATTTCCTTTTTATTTATTCAGTTGCTGTGTTCACTTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTCATTTCCTTTTTATTTATTCAGTTGCTGTGTTCACTTATTTT  300

seq1  ATCCATGTGTAATGAAAGCCAAATATTCTATGACGTCCCATAGTCTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGTGTAATGAAAGCCAAATATTCTATGACGTCCCATAGTCTTTGC  350

seq1  TTTATGCATTAACCATGAAATGAATGTGGTAAAAATGACCCATTTTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCATTAACCATGAAATGAATGTGGTAAAAATGACCCATTTTTAGA  400

seq1  TACTGCATTATGTGAAAATGTTGTGATCAGTAAACTAGAATCCCAGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCATTATGTGAAAATGTTGTGATCAGTAAACTAGAATCCCAGGCCT  450

seq1  CTTGGCAACCATTATTATATGCACTAAGTACTCTTACTGGAATTTGAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAACCATTATTATATGCACTAAGTACTCTTACTGGAATTTGAGTG  500

seq1  GTGGATTTATTAAGTAGTCAAAGATTTGAAACTGGGACAGTAAAAATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTATTAAGTAGTCAAAGATTTGAAACTGGGACAGTAAAAATAAG  550

seq1  TTTCCATGAAAGGAACTTACTTTATCTAAACAAAAGACAGTAGGCAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGAAAGGAACTTACTTTATCTAAACAAAAGACAGTAGGCAAAAC  600

seq1  ATTAGAATCATTTAATTAATATTTCAGGTATGAATAATAAAGATAACAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATCATTTAATTAATATTTCAGGTATGAATAATAAAGATAACAAC  650

seq1  ACACTTATTTATGAATCCAGGGTTTTTTAATTCATAAGGTTTTTTTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTATTTATGAATCCAGGGTTTTTTAATTCATAAGGTTTTTTTATAA  700

seq1  TGATACTCTGATTTAAAATTGTATTATGAATGAATACTCGGTTATGACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTCTGATTTAAAATTGTATTATGAATGAATACTCGGTTATGACAT  750

seq1  AGCTGAGTGTCTTTATTCCTCAAGTCAGAAAAGTCAGCAACTATTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTGTCTTTATTCCTCAAGTCAGAAAAGTCAGCAACTATTGAGCT  800

seq1  GATGTTTATTAGTTCAGTATTGGCTAATGTAAATGATGTATTTCTGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTATTAGTTCAGTATTGGCTAATGTAAATGATGTATTTCTGTATG  850

seq1  TGCTTCACTCTTCTTCATGCAAACGCATTGATTTCAATGAGTAAGTTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACTCTTCTTCATGCAAACGCATTGATTTCAATGAGTAAGTTGGA  900

seq1  AACCCTGTAAATAGTGGAAGAATCCATCGAAACTTAGCAAAAATAGCTGG  950
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  AACCCTGTAAATAGTGGAAG-ATCCATCGAAACTTAGC-AAAATAGCTGG  948

seq1  ATTTAATTCTGTGGTTTCACAACTTGCCAGTTGCAAAGTAAATATCAGTA  1000
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTAATTCTGTGGTTTCACAACTTGCCAGTTGCAAAGTAAATATCAGTA  997

seq1  CTACAAGGTAGTACTGAGACTGTATCCATCCTTGCCCTTTGCTTCTTGAA  1050
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  CTACAAGGTAGTACTGAGACTGTATCCATCCTTGCCCTTTGCT--CTGAA  1045

seq1  TATTTGTAA-TGTTGTATGGCTGTTAAAAACAGAAAACAAAATCA-CCAC  1098
       |||||||| ||| ||||||||||  || || ||||||  ||||| ||||
seq2  -ATTTGTAATTGTGGTATGGCTGT--AAGACCGAAAAC--AATCACCCAC  1090

seq1  TAATCTTAAGTTTCTTTTTACTTTCAGGTATGCCTGCCATTTA  1141
      |||||||||| ||| |||||| |||||  ||||| ||||||||
seq2  TAATCTTAAGGTTC-TTTTAC-TTCAG--ATGCCCGCCATTTA  1129