BAC Information

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BAC

Clone NameB6Ng01-041G02
Chromosome3 (Build37)
Map Location 64,395,956 - 64,396,448
singlet/doubletsinglet
Overlap gene4930518C23Rik, LOC100040918
Upstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069
Downstream gene4933425M15Rik, LOC670110, Kcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041G02.bB6Ng01-041G02.g
ACCDH868061DH868062
length805487
definitionDH868061|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G02, 5' end.DH868062|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccagagacactgaaacttatagaggagagtgtagg
aaaaagcctcaaagatatgggtacaggggaaacattcctgactagaacag
caatggcttgtgctgcaagatcgagaatctgtaaatgggacctcataaag
ttgcaaagcttctgcaaggaaaaagacaccgtcaataagacaaaaagacc
accaacagattgggaaaggatctttacctatcctaaatcatataggggac
taatatccaatacatataaagaactcaagaaggtagactccaaaaaatca
aaataccccattaaaaaaagggggctcagagctgaataaagaattctcac
ctgaggaataccgaatggcagagaagcatctcaaaaaatgttcaacatcc
ttaatcatcagggaaatgcaactcaaaacaaccctgagattccacctcac
accagtcagaatggctaagatcaaaaattaaggagacagcagatgctggc
gaggatgtggagaaagaggaacactccttcgttgttggtgagattgcaag
cttgtacaaccactctggaaatcagtttgggggttcctcagaaaattgga
cataatactaacagaggatccagcaatacctctcctgggcatatatccag
aagatgttccaaccggtaagaaggacacatgctccactatgttcatagca
gccttatttataatagcccagaagctggaaagaacccagatgcccctcaa
cagaggaatggatacagaaattgtggtatatttacacaatgggagtacta
ctcag
tgtggttttttttttttttttttcaataggctaaagggactgtggtcaat
gcaataaagatgactggtccaatgaagagaagaataagtgtgtgacaaag
cttgtggaattccttgcttatgaaaaggccctggggttctaccttgttat
cctttccatcgtttgggtgcttgcggttttggcagtaactattgtatatg
taatatataggcacattccattggtgaaagccagtgatcgggaactgaac
ttcctcattcagatatctctggttatcacagtgctgtcaactatgctgtt
cataagcaagccatgcaactggtcctgcatggcccaccagctcactctgg
tactggacttttgtctttgtctgtcttccattcttagaaagattatttca
ctctattttgcctacagaatttccatatccaaaacctgtcttatatctat
gcttaccattttttgaaaactcattgtgttgatctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64395956_64396448
seq2: B6Ng01-041G02.g_70_562 (reverse)

seq1  ACAGATCAACACAATGAGTTTTCAAAAAATGGTATGCATAGATATAAGAC  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACAGATCAACACAATGAGTTTTCAAAAAATGGTAAGCATAGATATAAGAC  50

seq1  AGGTTTTGGATATGGAAATTCTGTAGGCAAAATAGAGTGAAATAATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGGATATGGAAATTCTGTAGGCAAAATAGAGTGAAATAATCTTT  100

seq1  CTAAGAATGGAAGACAGACAAAGACAAAAGTCCAGTACCAGAGTGAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATGGAAGACAGACAAAGACAAAAGTCCAGTACCAGAGTGAGCTG  150

seq1  GTGGGCCATGCAGGACCAGTTGCATGGCTTGCTTATGAACAGCATAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCATGCAGGACCAGTTGCATGGCTTGCTTATGAACAGCATAGTTG  200

seq1  ACAGCACTGTGATAACCAGAGATATCTGAATGAGGAAGTTCAGTTCCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACTGTGATAACCAGAGATATCTGAATGAGGAAGTTCAGTTCCCGA  250

seq1  TCACTGGCTTTCACCAATGGAATGTGCCTATATATTACATATACAATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGCTTTCACCAATGGAATGTGCCTATATATTACATATACAATAGT  300

seq1  TACTGCCAAAACCGCAAGCACCCAAACGATGGAAAGGATAACAAGGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCAAAACCGCAAGCACCCAAACGATGGAAAGGATAACAAGGTAGA  350

seq1  ACCCCAGGGCCTTCTCATAAGCAAGGAATTCCACAAGCTTTGTCACACAC  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGGGCCTTTTCATAAGCAAGGAATTCCACAAGCTTTGTCACACAC  400

seq1  TTATTCTTCTCTTCATTGGACCAGTCATCTTTATTGCATTGACCACAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTCTCTTCATTGGACCAGTCATCTTTATTGCATTGACCACAGTC  450

seq1  CCTTTAGCCTATTGAAAAAAAAAAAAAAAAAACCACAGAATTC  493
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGCCTATTGAAAAAAAAAAAAAAAAAACCACAGAATTC  493