BAC Information

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BAC

Clone NameB6Ng01-041L18
Chromosome3 (Build37)
Map Location 41,057,740 - 41,058,266
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041L18.bB6Ng01-041L18.g
ACCDH868310DH868311
length903783
definitionDH868310|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L18, 5' end.DH868311|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggtggaatttttagggtcacttatatatactatcatatcat
ttgcaaaaagtgatattttgacgtcttcctttccaatttgtgtctccttg
atctcctcttgctgtcgaattgctctggccagaacttcaagtacaatgtt
gaataggtagggagaaagtgggcagccttgtctagtccctgattttagtg
ggattgcttccagcttctcaccatttactttgatgttggctactggtttg
ctctagattgcttttatcatgtttaggtatgggccttgaattcctgatct
ttccaagacttttatcatgaatgggtgttggattttctcaaatgctttct
cagcatctaacgagatgatcatgtggtttttgtctttgagtttgtttata
taatggatcactttgatggatttctgtatattaaaccatccctgcatccc
tggaataaaacctacttggtcaggatggatcggtgtgttaatgtgttctt
ggattcagttagcgagaattttattgagtatttttgcattgattttcaaa
ggaaaattggtctgaagttctctatctttgttggatctttctgtggttta
ggtatcagagtaattgttgcttcatagaatgcgttgggtagagtaccttg
tacttctattttgtggaatagtttgtgcagaactggaattagatcttctt
tgacggtctgatagaaccctgcactaaacctatctggtcctgggcttgtt
tttggttgggagactcttagtgactgcttctattcctttaggggatatgg
aactgtttaggtcgtaacttgatcctgatttaacacagtacctggtatct
gtctagaaattcctcatttcatcaggttttccagttttttgagtatagcc
ttt
gaattctcagctccttctctagcatcatgcctgtctggacaccgccatgc
ttcttgccttgattataatgggctgaacctctgaacctgtaagccagccc
caattaaatgttgtcctttataaaagttgccttataaaggtcatagtgtc
tctttacagcaatggaagccttaagacagttgacaaggaaagctcttaac
agggagtagaaccagctaagagagggaactgtatgccagtcaacaaaagt
taaaaggagttggacaccagacatggagatgcagaattcagactttgccc
acctggtttttggtcaagtatttccttgctatgctccctaccctgatgtt
ggaagtatgtgatttgctctttgattgtatagagaattacagttaagaga
gttcatgaattacagaagagactttgaactttggacttttaaatattgtt
taaactgtgatatactatagggaatttggaagttggactaaatgcatttt
gcaccacattatggctacaagtctatgctaactagggagtggaatatggt
ggtttgaataggttttgcctccataaattcatgtgtttgaatgctttagt
ctggggaatggcactgccaggtggcatggccttgttggaggaagtgtgtc
actgtctaggtgagcttttgaggcctcctgtgcacaggctccatgcagtt
cagaagacagtttcctcctggcttcctttggatcaagatgtggaactctt
ggatcttccagtaccaatgtctgtctgcactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41057740_41058266
seq2: B6Ng01-041L18.b_426_947 (reverse)

seq1  AAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTT  50
      ||||||||||||||| ||||||||||||||| || ||||| ||  |||||
seq2  AAAGGCTATACTCAA-AAAACTGGAAAACCT-GATGAAAT-GAGGAATTT  47

seq1  CTAGACAGATACCAGGTACCAAAGTTAAATCAGGATCAAGTTAACGATTT  100
      |||||||||||||||||| |   ||||||||||||||||||| ||||  |
seq2  CTAGACAGATACCAGGTA-CTGTGTTAAATCAGGATCAAGTT-ACGACCT  95

seq1  AAACAGTCGCATATCCCCTAAAGAAACAGAAGAAGTCATTAATAGTCTCC  150
      |||||||  |||||||||||||| || ||||| ||||| ||| |||||||
seq2  AAACAGTTCCATATCCCCTAAAGGAATAGAAGCAGTCACTAAGAGTCTCC  145

seq1  CAGCC-AAAACAAACCCAGGACCAGATGGTTTTAGTGCAGAGTTCTATCA  199
      || || ||||||| ||||||||||||| | |||||||||| |||||||||
seq2  CAACCAAAAACAAGCCCAGGACCAGATAGGTTTAGTGCAGGGTTCTATCA  195

seq1  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAATTATTCCACAAAA  249
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  GACCGTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTCCACAAAA  245

seq1  TAGAAGTAGAAGGTACTCTACCTAACTCATTCTATGAAGCCACAATTACT  299
      |||||||| ||||||||||||| ||| ||||||||||||| |||||||||
seq2  TAGAAGTACAAGGTACTCTACCCAACGCATTCTATGAAGCAACAATTACT  295

seq1  CTGATACCTAAACCACAGAAAGATGCAACAAAGATAGAGAACTTCAGACC  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC  345

seq1  AATTTCCCTTATGAATATCGATGCAAAAATACTCAATAAAATTCTCGCTA  399
      ||||| |||| |||| ||| ||||||||||||||||||||||||||||||
seq2  AATTTTCCTT-TGAAAATCAATGCAAAAATACTCAATAAAATTCTCGCTA  394

seq1  ACCGAATCCAAGAACACATTAAAGCAACCATCCATCCTGACCAAGTAGGT  449
      || |||||||||||||||||||  || | |||||||||||||||||||||
seq2  ACTGAATCCAAGAACACATTAACACACCGATCCATCCTGACCAAGTAGGT  444

seq1  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGGAAATCCATCAACGC  499
      |||||||||||||||||||||||||||||||||| |||||||||||| | 
seq2  TTTATTCCAGGGATGCAGGGATGGTTTAATATACAGAAATCCATCAAAGT  494

seq1  AATCCATTATATAAACAAACTCAAAGAC  527
       |||||||||||||||||||||||||||
seq2  GATCCATTATATAAACAAACTCAAAGAC  522