BAC Information

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BAC

Clone NameB6Ng01-042J07
Chromosome3 (Build37)
Map Location 41,059,133 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042J07.bB6Ng01-042J07.g
ACCDH868914DH868915
length998714
definitionDH868914|Mus musculus domesticus DNA, BAC clone: B6Ng01-042J07, 5' end.DH868915|Mus musculus domesticus DNA, BAC clone: B6Ng01-042J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttatctcttagccccatattttaatggggttatttgttt
ttctggagtccaccttcttgagatctttatatatattggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtgccct
ttttgtcctattgacggtgtcttttgccttccagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatctttcccctttgcccatatcttcgaggctttcccccac
tttctcctctataagtttcagtgtctcttgttttatgtggtgttttttga
tccacttagatttgaccttaatacaaggagataggaatggtttaattcac
gttcttctatatgataactacctgttgtgctagtaccatttgttaaaaat
gttatcttttttccactggatggttttagcttccttgtcgaagttcaagt
gacaagaggtgtgtgggttcatttctgggtcttcaattctattccattgt
tctacttgtctgtcactaaaccagtacattgcagttttttatgacaattg
ctctgtagtacagctataggtcaggcatggtgattccaccagagattctt
ttatccttgagaagagtttttgctatccaaatttttttgttattctggat
aaatttgcagattgtcctttctaattcgttgaagaattgagttggatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttataatgttgatcctgccaatccatgagcacagcagatcttttccatct
tctgatatctgatttaatttcttccttcagagacttgaagttcttatcat
acatatctttcaattcctttgttagagtcactccaaggtattttatatat
ttgtgactattgacatgggtgtgtatccctaattcttctcagcctgtt
gaattcatgaaattcctatggaaatggatggatctgaagggtatcatcct
gaatgcgttaacccattcacaaaagaactcaaatgatatgcactcactga
taaatggatttttgtccagaaatttagaatatccaagatacaatttgcaa
aacacatgaaactcaagaagaaggaaaccaatatgtggatgcttcatccc
ccccccttataatggggaacaaaatactcatggaaggagttacagagcca
aagtttgtaggtgagaccaaaggatgggccatcaagagacttccccaacc
gggaatccatctcataatcagcaaccaaacacagactctattataaatgc
cagcaagattttgctgaaagacccctgatatagctgtctcttgataggct
atgccagagccttgctaatacagaagtgattgttcacagtcgtgtattgg
atggaacactgggcccccaatgaaggagctagagaaaatacccaaggaga
tgaaggagtctgcaaccctataggagaaaaacaatataaagtatccagta
cccccagagcttgtggttctagctgcatatgtagcagaagatggcctagt
cagccatcattgggatgagaggccctttggtcttacaaactttatatgta
cagcagaacaccaggactaagaagagggactgaaagggtaggagaggggg
gtcagggaagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059133_41059737
seq2: B6Ng01-042J07.b_45_651 (reverse)

seq1  CTACAGAGCAATTGTGAT-AAAAACTGCATGGTACTGGTATAGTGACAGA  49
      ||||||||||||||| || ||||||||||  |||||||| ||||||||||
seq2  CTACAGAGCAATTGTCATAAAAAACTGCAATGTACTGGTTTAGTGACAGA  50

seq1  CAAGCAGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCACACAC  99
      |||| ||| ||||||||||||||||||||| |||||| ||| ||||||||
seq2  CAAGTAGAACAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC  100

seq1  CTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAAA  149
      || | ||||||||| ||||||||||| |||||||||||||||||||||||
seq2  CTCTTGTCACTTGAACTTCGACAAGGAAGCTAAAACCATCCAGTGGAAAA  150

seq1  AAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTATCATGT  199
      |||| | |||||| |||||||||| || ||||||| ||| |||||||| |
seq2  AAGATAACATTTTTAACAAATGGTACTAGCACAACAGGTAGTTATCATAT  200

seq1  AGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTCAAATC  249
      ||||||| | ||||| | ||| ||||||||||||||| ||||||||||||
seq2  AGAAGAACGTGAATTAAACCATTCCTATCTCCTTGTATTAAGGTCAAATC  250

seq1  TAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACTTATAG  299
      ||||||||||||  ||| ||||||||||| ||||||||||||||||||||
seq2  TAAGTGGATCAAAAAACACCACATAAAACAAGAGACACTGAAACTTATAG  300

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAAAATTC  349
      |||||||||||||| ||||||| |||||||||| || |||||||| ||||
seq2  AGGAGAAAGTGGGGGAAAGCCTCGAAGATATGGGCAAAGGGGAAAGATTC  350

seq1  CTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGACAAATG  399
      ||| |||||||||||||||||||||||||||||| |||||| ||||||||
seq2  CTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  400

seq1  GGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATA  449
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGACCTCATGAAACTGCAAAGCTTCTGGAAGGCAAAAGACACCGTCAATA  450

seq1  AGACAAAAA-GGCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAA  498
       |||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  GGACAAAAAGGGCACCAACAGATTGGGAAAGAATCTTTACCTATCCTAAA  500

seq1  TCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAGGTGGA  548
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  TCAGATAGGGGACTAATATCCAATATATATAAAGATCTCAAGAAGGTGGA  550

seq1  TTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAACA  598
       ||||||||| |||||||||||||||||| |||||||| |||| ||||||
seq2  CTCCAGAAAAACAAATAACCCCATTAAAATATGGGGCTAAGAGATAAACA  600

seq1  AAGAATT  605
      |||||||
seq2  AAGAATT  607