BAC Information

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BAC

Clone NameB6Ng01-043D10
Chromosome3 (Build37)
Map Location 142,203,686 - 142,307,096
singlet/doubletdoublet
Overlap geneGbp6, Gbp3, Gbp1, Gbp2
Upstream geneUnc5c, Bmpr1b, Gabarapl2-ps3, Pdlim5, Gbp5
Downstream geneEG621605, Ccbl2, Gtf2b, Pkn2, LOC100040053, LOC100039883, 1700001N15Rik, EG668889
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043D10.bB6Ng01-043D10.g
ACCDH869342DH869343
length1,1231,171
definitionDH869342|Mus musculus domesticus DNA, BAC clone: B6Ng01-043D10, 5' end.DH869343|Mus musculus domesticus DNA, BAC clone: B6Ng01-043D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,306,059 - 142,307,096)(142,203,686 - 142,204,867)
sequence
gaattcagacaggtacgagttccactgtaatacttttccttccatgacta
agcctgtgaagtgctctgccttctcacagatccaatcgaactttgttagg
cgcacccttatgaccatagagtggccggcagtgactgagtataaggttct
ccatgctttgtataaatatccagatttatttctcaaacaccgaatattta
ttatccatatatagacatgtttgcaatggaagccagcaggcaagtgttgg
tgggctcctttatgctttatgaagagtccccagttgtcaattcaccaata
aatatgaaggtaccatcatccacaatgaaggtaccatctctttcaatatt
ggttggggttgtgtgcacatagatgagcttaccagcaatcactggccctc
tattcctctcctcatttcaaattagctgctcttctagtaacccatttata
aaggggtttttaaatgatctgtaaatatagtatgaaatttctctagtgtg
aaagcataccaattataagctgtatctgagttttgtcactggttggtggg
attaaaggtatgtgccaccttactaaatgtaactctagaatctagaaaac
aactggtatatttagagaactggcagtctcggctgggattcaagtcatgg
gcttccaccgtgctattcaaatattttatattagctccaaagagggagag
tatatgttttaccttttgagaaaacaggtttgaactgtagtaattcgttg
aatttactcaacatactttaaatctcttgactgtgtttttaataccaaac
aacaataatatcctttttatttaagaagaaaagtgaaaagttaatgtcca
agatggtgtgggccacgtggaaatctacagtctaacatgttacatgaaac
taagacacatggtttaagaaaacccatttttcatttcatgccagtaaggc
aagtgtgccttttgtaaattatcaaatatattataaaaatattatctttt
ttcacttttatgtttttatgcctgatcacatgaaatgtcttgttagcctt
atacttagtttggactggaataaaccaagctgtctgaaggactattcttc
actttatttaaggaggtctctcc
gaattcagcatagcgacacactattggcttattcaaacatcagcagaaaa
attacatgtacatgcagggtgtcagagttctgtgagttgttgactcagtt
cagatagccctgctatgtcctcacattcctctttatctttctggtcaaga
tgttcccaggaatgttttaactacagggcatacctgggtttgtttttctt
tgttctcagccccaggcagcctctaggctcataaacaaccatcaatttct
gagtactttatatgacttacaagtcttgaaatttcatctttctttcacct
tatgttgtagttgtccctaccataaaattctttcatttctactttatgtg
taaatttgctactgttgtgagtcataatgcaaatatctgtgttttctgat
gatcttcaatgaaccctgtgtaagggccacttgacttccaaagaggttgt
gacccacaggttgagaaccactttcatagatgctcaaatgaagagtagtc
atgtggagtgttaccacagatggagaaataaaagaacacctgggatgcca
agctctctggaaagggaaacaataggcccttagcctgaagactgtccttt
ccaacagcaaatctcatttatatgtattttgcaggcatgagtatcaaagc
ccagaaagctaacttgcctagggaatgcatcaggcacttctttccaagac
ggaagtgctttgtctttgatcgacctacaaaagacaaagaacttttagtg
catgttgaggaaatgccagaggaccagttggatcacagtttccaagtgca
gtcaaaagaattctgttcctacatcttctccaattcgaaggccaagacct
tgaaagagggaatcgttgtcaatggaaaccgtgagtcacccttgccccag
ttaacatctctttactttaaaacggtgtattgtaaaacattgatatatgt
tagtatctgatgtgatacaaagaagcagctgttcatgctactcagaaact
ttttctagaggacatacattttaaggaaaaattatctctctacttgggtc
ttactgaaatctaaacatggtaatgctcatgatcaagagcaggatggaga
gattaagagggaatacctgtgtttggagtaatataaaggcacttcatgtt
cctttggctgctagaaaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_142306059_142307096
seq2: B6Ng01-043D10.b_132_1167 (reverse)

seq1  GGAGAGACCTCC-TAAATAAGGTGAGGAAATAGTTCATCAGACAGCTTGG  49
      |||||||||||| ||||||| |||| | |||||| | |||||||||||||
seq2  GGAGAGACCTCCTTAAATAAAGTGAAG-AATAGTCCTTCAGACAGCTTGG  49

seq1  -TTATT-CAGTCCAAACTAAGTTATAAAGGCTAACAAGAACATTTCATGT  97
       ||||| |||||||||||||| ||| |||||||||||| |||||||||||
seq2  TTTATTCCAGTCCAAACTAAG-TAT-AAGGCTAACAAG-ACATTTCATGT  96

seq1  GATCAGGCATAAAAACATAAAAGTGAAAAAAGATAATATTTTTAATAATA  147
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATCAGGCATAAAAACATAAAAGTGAAAAAAGATAATATTTTT-ATAATA  145

seq1  TATTTGATAATTTACAAAAGGCACACTTGCCTTACTGGCATGAAATGAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATAATTTACAAAAGGCACACTTGCCTTACTGGCATGAAATGAAA  195

seq1  AATGGGTTTTCTTAAACCATGTGTCTTAGTTTCATGTAACATGTTAGACT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTTTTCTTAAACCATGTGTCTTAGTTTCATGTAACATGTTAGACT  245

seq1  GTAGATTTCCACGTGGCCCACACCATCTTGGACATTAACTTTTCACTTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTCCACGTGGCCCACACCATCTTGGACATTAACTTTTCACTTTT  295

seq1  CTTCTTAAATAAAAAGGATATTATTGTTGTTTGGTATTAAAAACACAGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAAATAAAAAGGATATTATTGTTGTTTGGTATTAAAAACACAGTC  345

seq1  AAGAGATTTAAAGTATGTTGAGTAAATTCAACGAATTACTACAGTTCAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTTAAAGTATGTTGAGTAAATTCAACGAATTACTACAGTTCAAA  395

seq1  CCTGTTTTCTCAAAAGGTAAAACATATACTCTCCCTCTTTGGAGCTAATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTCTCAAAAGGTAAAACATATACTCTCCCTCTTTGGAGCTAATA  445

seq1  TAAAATATTTGAATAGCACGGTGGAAGCCCATGACTTGAATCCCAGCCGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTGAATAGCACGGTGGAAGCCCATGACTTGAATCCCAGCCGA  495

seq1  GACTGCCAGTTCTCTAAATATACCAGTTGTTTTCTAGATTCTAGAGTTAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCAGTTCTCTAAATATACCAGTTGTTTTCTAGATTCTAGAGTTAC  545

seq1  ATTTAGTAAGGTGGCACATACCTTTAATCCCACCAACCAGTGACAAAACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTAAGGTGGCACATACCTTTAATCCCACCAACCAGTGACAAAACT  595

seq1  CAGATACAGCTTATAATTGGTATGCTTTCACACTAGAGAAATTTCATACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACAGCTTATAATTGGTATGCTTTCACACTAGAGAAATTTCATACT  645

seq1  ATATTTACAGATCATTTAAAAACCCCTTTATAAATGGGTTACTAGAAGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAGATCATTTAAAAACCCCTTTATAAATGGGTTACTAGAAGAG  695

seq1  CAGCTAATTTGAAATGAGGAGAGGAATAGAGGGCCAGTGATTGCTGGTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAATTTGAAATGAGGAGAGGAATAGAGGGCCAGTGATTGCTGGTAA  745

seq1  GCTCATCTATGTGCACACAACCCCAACCAATATTGAAAGAGATGGTACCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCTATGTGCACACAACCCCAACCAATATTGAAAGAGATGGTACCT  795

seq1  TCATTGTGGATGATGGTACCTTCATATTTATTGGTGAATTGACAACTGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGGATGATGGTACCTTCATATTTATTGGTGAATTGACAACTGGG  845

seq1  GACTCTTCATAAAGCATAAAGGAGCCCACCAACACTTGCCTGCTGGCTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTCATAAAGCATAAAGGAGCCCACCAACACTTGCCTGCTGGCTTC  895

seq1  CATTGCAAACATGTCTATATATGGATAATAAATATTCGGTGTTTGAGAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAAACATGTCTATATATGGATAATAAATATTCGGTGTTTGAGAAA  945

seq1  TAAATCTGGATATTTATACAAAGCATGGAGAACCTTATACTCAGTCACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTGGATATTTATACAAAGCATGGAGAACCTTATACTCAGTCACTG  995

seq1  CCGGCCACTCTATGGTCATAAGGGTGCGCCTAACAAAGTTC  1038
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCCACTCTATGGTCATAAGGGTGCGCCTAACAAAGTTC  1036

seq1: chr3_142203686_142204867
seq2: B6Ng01-043D10.g_67_1237

seq1  GAATTCAGCATAGCGACACACTATTGGCTTATTCAAACATCAGCAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATAGCGACACACTATTGGCTTATTCAAACATCAGCAGAAAA  50

seq1  ATTACATGTACATGCAGGGTGTCAGAGTTCTGTGAGTTGTTGACTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTACATGCAGGGTGTCAGAGTTCTGTGAGTTGTTGACTCAGTT  100

seq1  CAGATAGCCCTGCTATGTCCTCACATTCCTCTTTATCTTTCTGGTCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGCCCTGCTATGTCCTCACATTCCTCTTTATCTTTCTGGTCAAGA  150

seq1  TGTTCCCAGGAATGTTTTAACTACAGGGCATACCTGGGTTTGTTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAGGAATGTTTTAACTACAGGGCATACCTGGGTTTGTTTTTCTT  200

seq1  TGTTCTCAGCCCCAGGCAGCCTCTAGGCTCATAAACAACCATCAATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAGCCCCAGGCAGCCTCTAGGCTCATAAACAACCATCAATTTCT  250

seq1  GAGTACTTTATATGACTTACAAGTCTTGAAATTTCATCTTTCTTTCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTTTATATGACTTACAAGTCTTGAAATTTCATCTTTCTTTCACCT  300

seq1  TATGTTGTAGTTGTCCCTACCATAAAATTCTTTCATTTCTACTTTATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTAGTTGTCCCTACCATAAAATTCTTTCATTTCTACTTTATGTG  350

seq1  TAAATTTGCTACTGTTGTGAGTCATAATGCAAATATCTGTGTTTTCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGCTACTGTTGTGAGTCATAATGCAAATATCTGTGTTTTCTGAT  400

seq1  GATCTTCAATGAACCCTGTGTAAGGGCCACTTGACTTCCAAAGAGGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAATGAACCCTGTGTAAGGGCCACTTGACTTCCAAAGAGGTTGT  450

seq1  GACCCACAGGTTGAGAACCACTTTCATAGATGCTCAAATGAAGAGTAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAGGTTGAGAACCACTTTCATAGATGCTCAAATGAAGAGTAGTC  500

seq1  ATGTGGAGTGTTACCACAGATGGAGAAATAAAAGAACACCTGGGATGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGTGTTACCACAGATGGAGAAATAAAAGAACACCTGGGATGCCA  550

seq1  AGCTCTCTGGAAAGGGAAACAATAGGCCCTTAGCCTGAAGACTGTCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTGGAAAGGGAAACAATAGGCCCTTAGCCTGAAGACTGTCCTTT  600

seq1  CCAACAGCAAATCTCATTTATATGTATTTTGCAGGCATGAGTATCAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGCAAATCTCATTTATATGTATTTTGCAGGCATGAGTATCAAAGC  650

seq1  CCAGAAAGCTAACTTGCCTAGGGAATGCATCAGGCACTTCTTTCCAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGCTAACTTGCCTAGGGAATGCATCAGGCACTTCTTTCCAAGAC  700

seq1  GGAAGTGCTTTGTCTTTGATCGACCTACAAAAGACAAAGAACTTTTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCTTTGTCTTTGATCGACCTACAAAAGACAAAGAACTTTTAGTG  750

seq1  CATGTTGAGGAAATGCCAGAGGACCAGTTGGATCACAGTTTCCAAGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGAGGAAATGCCAGAGGACCAGTTGGATCACAGTTTCCAAGTGCA  800

seq1  GTCAAAAGAATTCTGTTCCTACATCTTCTCCAATTCGAAGGCCAAGACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGAATTCTGTTCCTACATCTTCTCCAATTCGAAGGCCAAGACCT  850

seq1  TGAAAGAGGGAATCGTTGTCAATGGAAACCGTGAGTCACCCTTGCCCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGGGAATCGTTGTCAATGGAAACCGTGAGTCACCCTTGCCCCAG  900

seq1  TTAACATCTCTTTACTTTAAAACGGTGTATTGTAAAACATTGATTATATG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTAACATCTCTTTACTTTAAAACGGTGTATTGTAAAACATTGA-TATATG  949

seq1  TTAGTATCTGATGTGATTACAAAGAAGCAGCTGTTCATGCTACTCAGAAA  1000
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  TTAGTATCTGATGTGA-TACAAAGAAGCAGCTGTTCATGCTACTCAG-AA  997

seq1  ACTTTTTCTAAGAAGGACATACATTTTAAGGAAAATATTATCTCTCTACT  1050
      ||||||||||   |||||||||||||||||||||| ||||||||||||||
seq2  ACTTTTTCTA--GAGGACATACATTTTAAGGAAAA-ATTATCTCTCTACT  1044

seq1  TGGGTCTTTACTGAAATCTTATACATGTTAAATGCTCATGATCAAAGAAG  1100
      |||||| ||||||||||| || ||||| | |||||||||||||||   ||
seq2  TGGGTC-TTACTGAAATC-TAAACATGGT-AATGCTCATGATCAA--GAG  1089

seq1  CAAGATGAAGA-TTAAAGAGGGAATACCTGTGTTTGAAGTAATATAAAGG  1149
      || |||| |||  | ||||||||||||||||||||| ||||||||||| |
seq2  CAGGATGGAGAGATTAAGAGGGAATACCTGTGTTTGGAGTAATATAAA-G  1138

seq1  GCAC-TCATGTTTCTTTGTCTGGCTAGAAAAGAC  1182
      |||| ||||||| ||||| || ||||||||||||
seq2  GCACTTCATGTTCCTTTGGCT-GCTAGAAAAGAC  1171