BAC Information

Click to search

BAC

Clone NameB6Ng01-043G13
Chromosome3 (Build37)
Map Location 24,567,126 - 24,567,977
singlet/doubletsinglet
Overlap geneEG635702
Upstream geneEG665189
Downstream geneLOC100039592, Nlgn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043G13.bB6Ng01-043G13.g
ACCDH869482DH869483
length897481
definitionDH869482|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G13, 5' end.DH869483|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagacatgagcactagacagtcagaatatctgtcagttcccaga
actttatgaggttccatgtgggaccagaggctcagactgagagacctgcc
tatcaagattgactttattcttgaagtcacaaagtggacagtgactctgg
acttatagttcttgaacactaccatcagcatagccttggaatccaccaga
aattaaaatacgcactcttcactttcaaacccaataaggcagcatctctg
agagtggcacctcacagtctgttgtaatgatttgttagagggttgtctgc
atgtctagtctgaaaggccctggaacagagaaaagggagtggaggctaat
atcaagcttttatggtgagcaaccataaaagaactgcaagcttcacagca
cctttctgcaagaaatctgagaaatcagaagtaaacatgacaaggttgag
tgcacttatcataggtcaagtgcttatagttaaaggaaaaggtaatatac
ttaagaacaagaataaaggctggcatgcctagttaccaaccattattgaa
ccaaatgcagttcaaagcaacaaacaaaacatctctggacataccattaa
tcagtgatggttacatgtttgggaaatacctggagatgtgatttatttta
gtcagcttcgtggtgataacattaaaaatatggagatggcaatgccctca
gatgcttcattgatcatgaactttgaggaatgaggaagtgctctgagaaa
ttcaagtctagtataaacacagattccaagaataatacttccctattggt
gtgacttgcaatctggcacattttcttggaacttaagacaggaaaagaga
ggggtggggagggatctgcaggagtggttcagtggttaggaacactg

atcccatatatagacaccaaacccagacactattgcagatgccaagaagt
gcttgctgagaggagcctgatacagctgtctcctgagagggtctgccaga
ccttgaccaatacagatactgatgcttacagccaaccattggactgaaca
tggagaccccaatggaggagttaaagaaaggactgaaggagcagaagggg
ttggcagtcccataggaagaacaacaatatcaatcaaccagacactgcag
atctccagggactaaaccacgaaccaaagagtaaacacggaagtacccat
ggctccagccacacatgtagcagaggatgacattgtctggcatcaacagg
agtagaagtccttggtcttgtgaaggcttgattctccagtgtagggtaat
gccagagtggtgaattagaagtggtaaataggaggagaagcaccctcata
gaatcagggggaggggtgatgggatagtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_24567126_24567977
seq2: B6Ng01-043G13.b_42_893 (reverse)

seq1  CCTCTCTTTTCCTGTCTTAAGTTCCAAGAAAATGTGCCAGATTGCAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTTCCTGTCTTAAGTTCCAAGAAAATGTGCCAGATTGCAAGTC  50

seq1  ACACCAATAGGGAAGTATTATTCTTGGAATCTGTGTTTATACTAGACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAATAGGGAAGTATTATTCTTGGAATCTGTGTTTATACTAGACTTG  100

seq1  AATTTCTCAGAGCACTTCCTCATTCCTCAAAGTTCATGATCAATGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCAGAGCACTTCCTCATTCCTCAAAGTTCATGATCAATGAAGCA  150

seq1  TCTGAGGGCATTGCCATCTCCATATTTTTAATGTTATCACCACGAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGGCATTGCCATCTCCATATTTTTAATGTTATCACCACGAAGCTG  200

seq1  ACTAAAATAAATCACATCTCCAGGTATTTCCCAAACATGTAACCATCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATAAATCACATCTCCAGGTATTTCCCAAACATGTAACCATCACT  250

seq1  GATTAATGGTATGTCCAGAGATGTTTTGTTTGTTGCTTTGAACTGCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATGGTATGTCCAGAGATGTTTTGTTTGTTGCTTTGAACTGCATTT  300

seq1  GGTTCAATAATGGTTGGTAACTAGGCATGCCAGCCTTTATTCTTGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAATAATGGTTGGTAACTAGGCATGCCAGCCTTTATTCTTGTTCTT  350

seq1  AAGTATATTACCTTTTCCTTTAACTATAAGCACTTGACCTATGATAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATTACCTTTTCCTTTAACTATAAGCACTTGACCTATGATAAGTG  400

seq1  CACTCAACCTTGTCATGTTTACTTCTGATTTCTCAGATTTCTTGCAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACCTTGTCATGTTTACTTCTGATTTCTCAGATTTCTTGCAGAAA  450

seq1  GGTGCTGTGAAGCTTGCAGTTCTTTTATGGTTGCTCACCATAAAAGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGTGAAGCTTGCAGTTCTTTTATGGTTGCTCACCATAAAAGCTTG  500

seq1  ATATTAGCCTCCACTCCCTTTTCTCTGTTCCAGGGCCTTTCAGACTAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGCCTCCACTCCCTTTTCTCTGTTCCAGGGCCTTTCAGACTAGAC  550

seq1  ATGCAGACAACCCTCTAACAAATCATTACAACAGACTGTGAGGTGCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGACAACCCTCTAACAAATCATTACAACAGACTGTGAGGTGCCACT  600

seq1  CTCAGAGATGCTGCCTTATTGGGTTTGAAAGTGAAGAGTGCGTATTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGATGCTGCCTTATTGGGTTTGAAAGTGAAGAGTGCGTATTTTAA  650

seq1  TTTCTGGTGGATTCCAAGGCTATGCTGATGGTAGTGTTCAAGAACTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTGGATTCCAAGGCTATGCTGATGGTAGTGTTCAAGAACTATAA  700

seq1  GTCCAGAGTCACTGTCCACTTTGTGACTTCAAGAATAAAGTCAATCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAGTCACTGTCCACTTTGTGACTTCAAGAATAAAGTCAATCTTGA  750

seq1  TAGGCAGGTCTCTCAGTCTGAGCCTCTGGTCCCACATGGAACCTCATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGGTCTCTCAGTCTGAGCCTCTGGTCCCACATGGAACCTCATAAA  800

seq1  GTTCTGGGAACTGACAGATATTCTGACTGTCTAGTGCTCATGTCTGGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGAACTGACAGATATTCTGACTGTCTAGTGCTCATGTCTGGAAT  850

seq1  TC  852
      ||
seq2  TC  852


| Home | SequenceCutter | Blast | Download |