BAC Information

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BAC

Clone NameB6Ng01-043K08
Chromosome3 (Build37)
Map Location 38,782,000 - 38,783,130
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665811, EG665821, LOC100041366, LOC100040785, LOC665838, Ankrd50, LOC100041378, LOC665855, LOC100040824
Downstream geneFat4, LOC100041432, LOC100040853, LOC100041443, LOC100041458
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043K08.bB6Ng01-043K08.g
ACCDH869647DH869648
length1,1761,112
definitionDH869647|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K08, 5' end.DH869648|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaaaggctgagaagcacctgagaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcg
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtgttacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggaactggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaagtgaaatgtactcactgataagtggatattatcccagaaac
ttagtatagcgagatacaaggtacaatatgcaaaacacatgaaactgtag
aagaacgaagaccaaggtgtggacactttgttccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgtcatatccagtgatccatcccataatta
gcctccaaacgatgacaccattgcatacactagcaagcctttgttgcaag
gaccgtgatatagctctctcttgtgagactaggccggggcctagcaaaca
cagaagtggatgctcacagtcaactattggatggatcacagggccccaat
ggaggagctagagaaagtatccaagagctaaagagatctgcaccctatca
gtggaacaacattatgactaaccagtacccagagctcttgacttctagct
gcaatgtatcaaagatgcctagtgggccatcactggaaaggaaggccaat
gtcagcactttatatgccccagatacagggaatgtcaaggccaaaaatgg
aatgggtgggtgtatgagagggttgg
gaattcctttgtttagttagaacattcatttctgccttttccccagctat
agcgtgatgagtgaactggacgtagaccagagagttaggcgtctctattg
ctacatttttctgactgcaaagctattgaatatatttcattaactgcccc
cccttaaaaaaaaaagcaaaaacaaaacaaacaaaacaaaacagacaaaa
ccactcttaagccccgccaaaattattttatcagtgccaaccaaccctta
cctcaccgccaccccagtatttaactgtaattaagccagaaaagattcgt
gaattaaggtttgttcaaagggactacaaaccgcagctatgagagtgtga
acactgtagaagactttagttttgtttgctaatcctgcgcagttcactac
tccatcacataaaaatgggaggaaaccactcggatatattgggggaagac
cgtggatttttgctggtctgcctggtgtctgtcggggagcatgcaaaatg
ccttcgcagctcaacagaatggaattaacatctcttgccagtgaatttaa
gttgagaaaacaggtaattgaattcattctgtagaatggagtgtttaatc
tgtgaaataagtgtatagtcttcgctttaataaaaaaaaaaagggcaatg
caaaaaaatgggtcacattcagcccaaaaatacttgtttggaaaattcca
agaaaggattgccacaaattatttaagcaatgctctggttagtttaacaa
ctaactttccataatgatgtaatgactcatttgcagataattctacacaa
aactacaattttgcattcgtcatatataatttaaaaagaaataaggagaa
tgttttggataaagcatgaaataaagcttttgttacattttatttttgtc
tcccttaaatttctagagctgtgttaacatagtatactaccttatatgta
tatgtatatacaatatacaccatatatatatgatgtatatctatattagc
atattaatatatatactatatatatgtgtatattatagatatgatttact
atattacctataccgtatcttttctcctgggtgaaaataaaggctttgcc
aggatacttgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_38782000_38783130
seq2: B6Ng01-043K08.g_66_1177 (reverse)

seq1  GTCAAGTATCCCTGGCAAAAGCCTTTATTTTCACCCA-GAGAAAGAATTA  49
      ||||||||| |||||| |||||||||||||||||||| ||||||  ||  
seq2  GTCAAGTAT-CCTGGC-AAAGCCTTTATTTTCACCCAGGAGAAAAGATAC  48

seq1  CGTATATGGTAATATAGTAAATCTATTATCTATTATATTATATTACAT-T  98
       ||||| ||||||||||||||||   ||||||| ||||      |||| |
seq2  GGTATA-GGTAATATAGTAAATC--ATATCTATAATAT----ACACATAT  91

seq1  ATATATTATGTTATATATTATATAATATGCTAATATTAGATAATAACATA  148
      ||||| ||   |||||||    ||||||||||||| ||||||   |||| 
seq2  ATATAGTA---TATATAT----TAATATGCTAATA-TAGATA--TACATC  131

seq1  AATAATATATATGGTGTATATTGTATATACATATACATATAAGGTAGTAT  198
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  A--TATATATATGGTGTATATTGTATATACATATACATATAAGGTAGTAT  179

seq1  ACTATGTTAACACAGCTCTAGAAATTTAAGGGAGACAAAAATAAAATGTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTAACACAGCTCTAGAAATTTAAGGGAGACAAAAATAAAATGTA  229

seq1  ACAAAAGCTTTATTTCATGCTTTATCCAAAACATTCTCCTTATTTCTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCTTTATTTCATGCTTTATCCAAAACATTCTCCTTATTTCTTTT  279

seq1  TAAATTATATATGACGAATGCAAAATTGTAGTTTTGTGTAGAATTATCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATATATGACGAATGCAAAATTGTAGTTTTGTGTAGAATTATCTG  329

seq1  CAAATGAGTCATTACATCATTATGGAAAGTTAGTTGTTAAACTAACCAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGTCATTACATCATTATGGAAAGTTAGTTGTTAAACTAACCAGA  379

seq1  GCATTGCTTAAATAATTTGTGGCAATCCTTTCTTGGAATTTTCCAAACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCTTAAATAATTTGTGGCAATCCTTTCTTGGAATTTTCCAAACAA  429

seq1  GTATTTTTGGGCTGAATGTGACCCATTTTTTTGCATTGCCCTTTTTTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTGGGCTGAATGTGACCCATTTTTTTGCATTGCCCTTTTTTTTT  479

seq1  TTATTAAAGCGAAGACTATACACTTATTTCACAGATTAAACACTCCATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAGCGAAGACTATACACTTATTTCACAGATTAAACACTCCATTC  529

seq1  TACAGAATGAATTCAATTACCTGTTTTCTCAACTTAAATTCACTGGCAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATGAATTCAATTACCTGTTTTCTCAACTTAAATTCACTGGCAAG  579

seq1  AGATGTTAATTCCATTCTGTTGAGCTGCGAAGGCATTTTGCATGCTCCCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTAATTCCATTCTGTTGAGCTGCGAAGGCATTTTGCATGCTCCCC  629

seq1  GACAGACACCAGGCAGACCAGCAAAAATCCACGGTCTTCCCCCAATATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACACCAGGCAGACCAGCAAAAATCCACGGTCTTCCCCCAATATAT  679

seq1  CCGAGTGGTTTCCTCCCATTTTTATGTGATGGAGTAGTGAACTGCGCAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTGGTTTCCTCCCATTTTTATGTGATGGAGTAGTGAACTGCGCAGG  729

seq1  ATTAGCAAACAAAACTAAAGTCTTCTACAGTGTTCACACTCTCATAGCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAAACAAAACTAAAGTCTTCTACAGTGTTCACACTCTCATAGCTG  779

seq1  CGGTTTGTAGTCCCTTTGAACAAACCTTAATTCACGAATCTTTTCTGGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTGTAGTCCCTTTGAACAAACCTTAATTCACGAATCTTTTCTGGCT  829

seq1  TAATTACAGTTAAATACTGGGGTGGCGGTGAGGTAAGGGTTGGTTGGCAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAGTTAAATACTGGGGTGGCGGTGAGGTAAGGGTTGGTTGGCAC  879

seq1  TGATAAAATAATTTTGGCGGGGCTTAAGAGTGGTTTTGTCTGTTTTGTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAATAATTTTGGCGGGGCTTAAGAGTGGTTTTGTCTGTTTTGTTT  929

seq1  TGTTTGTTTTGTTTTTGCTTTTTTTTTTAAGGGGGGGCAGTTAATGAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTGTTTTTGCTTTTTTTTTTAAGGGGGGGCAGTTAATGAAAT  979

seq1  ATATTCAATAGCTTTGCAGTCAGAAAAATGTAGCAATAGAGACGCCTAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAATAGCTTTGCAGTCAGAAAAATGTAGCAATAGAGACGCCTAAC  1029

seq1  TCTCTGGTCTACGTCCAGTTCACTCATCACGCTATAGCTGGGGAAAAGGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTCTACGTCCAGTTCACTCATCACGCTATAGCTGGGGAAAAGGC  1079

seq1  AGAAATGAATGTTCTAACTAAACAAAGGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  AGAAATGAATGTTCTAACTAAACAAAGGAATTC  1112