BAC Information

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BAC

Clone NameB6Ng01-043M18
Chromosome3 (Build37)
Map Location 138,142,897 - 138,144,084
singlet/doubletsinglet
Overlap geneMetap1
Upstream geneEG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5
Downstream geneEG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879, B930007M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043M18.bB6Ng01-043M18.g
ACCDH869749DH869750
length8081,172
definitionDH869749|Mus musculus domesticus DNA, BAC clone: B6Ng01-043M18, 5' end.DH869750|Mus musculus domesticus DNA, BAC clone: B6Ng01-043M18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagtctctggtgagaagtctggtgcaattctaataggcctgcc
tttatatgttacttgacctttttcccttactgcttttaatattctatctt
tatttagtgcctttgttgttctgattattatgtgtcaggaggaatttctt
ttctggtccagtctatttggaattctgtaggcttcttgtatgttcatggg
catctctttctttaggtttgggaaattttcttctttaattttgttgaaga
tatttgctagccctttaagttgaaaatcttcattgtcatctactcctatt
atccgtaggtttggtcttctcattgtgtcctggatttcctggatgttttg
agttaggatctttttgctttttgctttttgattgttgtgcccatgttctc
tatggaatcttctgcacctgagattctctcttccatctcttgtattctgt
tgctgatgctcgcatctatgattccagatttctttcctagggtttctatc
tccagtgttgtctcactttgggttttctttattgtttctacttccctttt
taggtcttatatgtttttttttaattccatcacctgtttggttgtgtttt
cctgtatttcttgaagaacttctacctctttagcagtgttctcctgtatt
tctttaagtgagttattaaagtccttcttgatgtcctctaccaggatcat
gagatatgatttttaaatctgagtcttgctttttcgggtgtgttgggtta
tccaggattggctgagttaggagtgctgggttatgatgatggtgagtggg
tcttggtt
gaattcagctgttaaatctgatttcagtgggaaggttctgctcctatttg
atatcttaaaatgagttttgtatgaattgacattgtagaaagtgtaacca
ttgaaagctgctctgtttgagactgaacagcatgtgtctaggtggtcttc
cccgacagtgagatctgagaggggcggaaggctttgtcaggttagattgg
atgcttgctagatttttgctccacctaatgagaatttaaataaactgctg
ttcaagcctactgtctgaagcattcttttctgtccttcctttcacatctg
tccatctctctctcttccagaagatgaaaaggcaaagcgagaagtgtgtt
cctggactgtagaaggtgatgtcaacactgacccatgggcaggctatcgg
tacactggtaaactcaggccacattatccactggtgagtatgtaaagtaa
ttagattgtaacattgtataaaacaattttcagttttctgagattggtgc
ttgtaagtgttattctagtagcgaatcatgaacagggttgttttcagaaa
gaaatgtacattcgagctctcgggccgtatcatttaggagctagcaggga
cggttggcagttgtggaagaagtggaacatttttagatgtaaagactaaa
actttattaattttatagaagaatggtgtatgctattgattttctacaat
tttttaatatgacccattgtgacctaattataatggattaggtaccactc
ctaaccctttctgttggactcaaaagttctttttagttgtttgagaactt
catgcataaataaaatgtggtttgatcaggctcagctctaactcctccat
tgtttctctactacatttccctcacaacttcatggactttaaaaaactga
ttgagtccacttagtactgccagtgtgacgtgggtgggccgctcaccaga
gcacaggcccattgtcaggactcattcatacagacatgggtgcctagggc
tcctccagcaatgctgcagtttggctgttgatcttgcacaagtgtatgca
tgcactctcagctgttgctgttgtcagtcttgggtggcacaggctctcaa
gtacagtcaatgctgtctggctgcaaattccaaacctctgctgaatagca
agccttaacatgtaagtagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_138142897_138144084
seq2: B6Ng01-043M18.g_69_1240 (reverse)

seq1  AGTCTACTTATCATTGGTTTTAAGGCTTTCCCCAATCAGGCAGAGGTTGT  50
      |||||||||| ||    | |||||||||   | | ||| ||||||||| |
seq2  AGTCTACTTA-CA----TGTTAAGGCTT--GCTATTCA-GCAGAGGTT-T  41

seq1  GGACATCTGCAGCAAGACAGCATTGACTGTACATGAGAAGCCTGTTGCAC  100
      ||| || |||||| |||||||||||||||||| |||| |||||||  |||
seq2  GGA-ATTTGCAGCCAGACAGCATTGACTGTACTTGAG-AGCCTGTGCCAC  89

seq1  ACAAGACCTGACAACAGCAACAGCTGAGAGTGCATGCATACAACTTGTGC  150
       ||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  CCAAGA-CTGACAACAGCAACAGCTGAGAGTGCATGCATAC-ACTTGTGC  137

seq1  AAGATCAAACCAGCCAAACTGCAGCATGGCTGGAGGAGCCCTAGGCACCC  200
      ||||||||  ||||||||||||||||| ||||||||||||||||||||||
seq2  AAGATCAA--CAGCCAAACTGCAGCATTGCTGGAGGAGCCCTAGGCACCC  185

seq1  ATGTCTGTATGAATGAGTCCCTGACAATGGGCCTGTGCTCTGGTGAGCGG  250
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGTCTGTATGAATGAGT-CCTGACAATGGGCCTGTGCTCTGGTGAGCGG  234

seq1  CCCACCCACGTCACACTGGCAGTACTAAGTGGACTCAATCAGTTTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACGTCACACTGGCAGTACTAAGTGGACTCAATCAGTTTTTTAA  284

seq1  AGTCCATGAAGTTGTGAGGGAAATGTAGTAGAGAAACAATGGAGGAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATGAAGTTGTGAGGGAAATGTAGTAGAGAAACAATGGAGGAGTTA  334

seq1  GAGCTGAGCCTGATCAAACCACATTTTATTTATGCATGAAGTTCTCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGCCTGATCAAACCACATTTTATTTATGCATGAAGTTCTCAAAC  384

seq1  AACTAAAAAGAACTTTTGAGTCCAACAGAAAGGGTTAGGAGTGGTACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAAGAACTTTTGAGTCCAACAGAAAGGGTTAGGAGTGGTACCTA  434

seq1  ATCCATTATAATTAGGTCACAATGGGTCATATTAAAAAATTGTAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTATAATTAGGTCACAATGGGTCATATTAAAAAATTGTAGAAAAT  484

seq1  CAATAGCATACACCATTCTTCTATAAAATTAATAAAGTTTTAGTCTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCATACACCATTCTTCTATAAAATTAATAAAGTTTTAGTCTTTAC  534

seq1  ATCTAAAAATGTTCCACTTCTTCCACAACTGCCAACCGTCCCTGCTAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAATGTTCCACTTCTTCCACAACTGCCAACCGTCCCTGCTAGCT  584

seq1  CCTAAATGATACGGCCCGAGAGCTCGAATGTACATTTCTTTCTGAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGATACGGCCCGAGAGCTCGAATGTACATTTCTTTCTGAAAACA  634

seq1  ACCCTGTTCATGATTCGCTACTAGAATAACACTTACAAGCACCAATCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTTCATGATTCGCTACTAGAATAACACTTACAAGCACCAATCTCA  684

seq1  GAAAACTGAAAATTGTTTTATACAATGTTACAATCTAATTACTTTACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGAAAATTGTTTTATACAATGTTACAATCTAATTACTTTACATA  734

seq1  CTCACCAGTGGATAATGTGGCCTGAGTTTACCAGTGTACCGATAGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGTGGATAATGTGGCCTGAGTTTACCAGTGTACCGATAGCCTGC  784

seq1  CCATGGGTCAGTGTTGACATCACCTTCTACAGTCCAGGAACACACTTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGTCAGTGTTGACATCACCTTCTACAGTCCAGGAACACACTTCTC  834

seq1  GCTTTGCCTTTTCATCTTCTGGAAGAGAGAGAGATGGACAGATGTGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCCTTTTCATCTTCTGGAAGAGAGAGAGATGGACAGATGTGAAAG  884

seq1  GAAGGACAGAAAAGAATGCTTCAGACAGTAGGCTTGAACAGCAGTTTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACAGAAAAGAATGCTTCAGACAGTAGGCTTGAACAGCAGTTTATT  934

seq1  TAAATTCTCATTAGGTGGAGCAAAAATCTAGCAAGCATCCAATCTAACCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTCATTAGGTGGAGCAAAAATCTAGCAAGCATCCAATCTAACCT  984

seq1  GACAAAGCCTTCCGCCCCTCTCAGATCTCACTGTCGGGGAAGACCACCTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGCCTTCCGCCCCTCTCAGATCTCACTGTCGGGGAAGACCACCTA  1034

seq1  GACACATGCTGTTCAGTCTCAAACAGAGCAGCTTTCAATGGTTACACTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGCTGTTCAGTCTCAAACAGAGCAGCTTTCAATGGTTACACTTT  1084

seq1  CTACAATGTCAATTCATACAAAACTCATTTTAAGATATCAAATAGGAGCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATGTCAATTCATACAAAACTCATTTTAAGATATCAAATAGGAGCA  1134

seq1  GAACCTTCCCACTGAAATCAGATTTAACAGCTGAATTC  1188
      ||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCCCACTGAAATCAGATTTAACAGCTGAATTC  1172