BAC Information

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BAC

Clone NameB6Ng01-044A03
Chromosome3 (Build37)
Map Location 29,945,460 - 29,946,554
singlet/doubletsinglet
Overlap genenone
Upstream gene6130401L20Rik, LOC100040676, Evi1
Downstream geneMds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7, Tloc1, Gpr160, Phc3, LOC100040809, Prkci
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044A03.bB6Ng01-044A03.g
ACCDH869892DH869893
length1,1781,095
definitionDH869892|Mus musculus domesticus DNA, BAC clone: B6Ng01-044A03, 5' end.DH869893|Mus musculus domesticus DNA, BAC clone: B6Ng01-044A03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcatctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagacttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaataatgaatttatgaaattcctaggcaa
atggatggacctggagggcaccatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggacatccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttagagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcaaaa
ggatccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggctccca
atggaggagctagagaaagtacccaaagagctaaagggatctgcaaccct
ataggtggatcaacattatgaactaaccagtaccccggagctctgactct
agctgcattagtatcaaagatggctagtcgccatcacttgtaagaaaggt
ccattggacatgcaactcttataggctcaatacaagggaacgccggtcca
taagggggagatggtgttggctggtgaa
gaattcctcagcctttttagctcccccttagccattgttgttcaatatca
cgaatttcatatggtgcaataatgacattatgaaccaccacttcagtgta
atccattgctccacatttcaggcctttagaaaaatcacttgcagatacaa
attatttcctgggagattgagtttatttataggctaatcactatatgctt
aggtctttaattgaatctacaagggttcccccaggaagacataaggtaaa
aacctgcatacaatggagagaaagaaaataaactgacagtcatcaggatc
tgtatatcatctagaaactattccaaataaaagacaacaacctatagaca
tttaaatccatggcatcagaggtggtcaggctgtatctcttagtacaagg
aatttgctgtccaggtagctaagcatgagttatacttctacaccagggta
caccaaggacaaagttttcattgtaatctttgcatatatacccttagaaa
gacatctgtctcattattcaatacttcctttgttagtttacaagattcat
atgcagttcgtgttatttcctctgtcttatgtccaacttttgatggctgc
tgttgaatgttggtttaatttctgatttcccattgcggaatgacctagtc
ttttcctatttgtgtttcccaggaactttctattttgttagaactaattc
tctttcttctcctgagagaactaaggtccaagtccttgcttatcagtgct
tcacctacatgttaattatttgaacaactttccaggtcagtctccctgtc
tctcctaatggccatggccatttaacaatagctgagcggttcttgttccc
atttttatcatctgacttagaataatatggtataagcttttgataaagat
cattaaatgatgtattgcaacagtcatttatttatttgaaattactttca
tttaatgtggatgaatttctaaataatttttaaagacaaattactctact
gtaaaaggacaatggtaatataatgttgagagtttttaaagaattatttt
aattggtacaaacaccattatataatatattaagtgtggtgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29945460_29946554
seq2: B6Ng01-044A03.g_67_1161 (reverse)

seq1  CATACA-CACACTT-ATATA-TATATAAT-GTGTTTGTACCAATTAAAAT  46
      |||||| ||||||| ||||| |||||||| ||||||||||||||||||||
seq2  CATACACCACACTTAATATATTATATAATGGTGTTTGTACCAATTAAAAT  50

seq1  AA-TCTTTAAAAACTCTTCAACATTATATTACCATTGTCCTTTTACAGTA  95
      || ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATTCTTTAAAAACTC-TCAACATTATATTACCATTGTCCTTTTACAGTA  99

seq1  GAGTAAATTTGTCTTTAAAAATTATTTAGAAATTCATCCAACATTAAATG  145
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGT-AATTTGTCTTTAAAAATTATTTAGAAATTCATCC-ACATTAAATG  147

seq1  AAAGTAATTTCAAATAAAATAAATGACTGTTGCAATACATCATTTAATGA  195
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAGTAATTTCAAAT-AAATAAATGACTGTTGCAATACATCATTTAATGA  196

seq1  TCTTTTATCAAAAGCTTATACCATATTATTCTAAGTCAGATGATAAAAAT  245
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TTTATCAAAAGCTTATACCATATTATTCTAAGTCAGATGATAAAAAT  245

seq1  GGGAACAAGAACCGCTCAGCTATTGTTAAATGGCCATGGCCATTAGGAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAAGAACCGCTCAGCTATTGTTAAATGGCCATGGCCATTAGGAGA  295

seq1  GACAGGGAGACTGACCTGGAAAGTTGTTCAAATAATTAACATGTAGGTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGAGACTGACCTGGAAAGTTGTTCAAATAATTAACATGTAGGTGA  345

seq1  AGCACTGATAAGCAAGGACTTGGACCTTAGTTCTCTCAGGAGAAGAAAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGATAAGCAAGGACTTGGACCTTAGTTCTCTCAGGAGAAGAAAGA  395

seq1  GAATTAGTTCTAACAAAATAGAAAGTTCCTGGGAAACACAAATAGGAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTTCTAACAAAATAGAAAGTTCCTGGGAAACACAAATAGGAAAA  445

seq1  GACTAGGTCATTCCGCAATGGGAAATCAGAAATTAAACCAACATTCAACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGTCATTCCGCAATGGGAAATCAGAAATTAAACCAACATTCAACA  495

seq1  GCAGCCATCAAAAGTTGGACATAAGACAGAGGAAATAACACGAACTGCAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCATCAAAAGTTGGACATAAGACAGAGGAAATAACACGAACTGCAT  545

seq1  ATGAATCTTGTAAACTAACAAAGGAAGTATTGAATAATGAGACAGATGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTTGTAAACTAACAAAGGAAGTATTGAATAATGAGACAGATGTC  595

seq1  TTTCTAAGGGTATATATGCAAAGATTACAATGAAAACTTTGTCCTTGGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGGGTATATATGCAAAGATTACAATGAAAACTTTGTCCTTGGTG  645

seq1  TACCCTGGTGTAGAAGTATAACTCATGCTTAGCTACCTGGACAGCAAATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGGTGTAGAAGTATAACTCATGCTTAGCTACCTGGACAGCAAATT  695

seq1  CCTTGTACTAAGAGATACAGCCTGACCACCTCTGATGCCATGGATTTAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGAGATACAGCCTGACCACCTCTGATGCCATGGATTTAAA  745

seq1  TGTCTATAGGTTGTTGTCTTTTATTTGGAATAGTTTCTAGATGATATACA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATAGGTTGTTGTCTTTTATTTGGAATAGTTTCTAGATGATATACA  795

seq1  GATCCTGATGACTGTCAGTTTATTTTCTTTCTCTCCATTGTATGCAGGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGATGACTGTCAGTTTATTTTCTTTCTCTCCATTGTATGCAGGTT  845

seq1  TTTACCTTATGTCTTCCTGGGGGAACCCTTGTAGATTCAATTAAAGACCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTATGTCTTCCTGGGGGAACCCTTGTAGATTCAATTAAAGACCT  895

seq1  AAGCATATAGTGATTAGCCTATAAATAAACTCAATCTCCCAGGAAATAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATAGTGATTAGCCTATAAATAAACTCAATCTCCCAGGAAATAAT  945

seq1  TTGTATCTGCAAGTGATTTTTCTAAAGGCCTGAAATGTGGAGCAATGGAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTGCAAGTGATTTTTCTAAAGGCCTGAAATGTGGAGCAATGGAT  995

seq1  TACACTGAAGTGGTGGTTCATAATGTCATTATTGCACCATATGAAATTCG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGAAGTGGTGGTTCATAATGTCATTATTGCACCATATGAAATTCG  1045

seq1  TGATATTGAACAACAATGGCTAAGGGGGAGCTAAAAAGGCTGAGGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGAACAACAATGGCTAAGGGGGAGCTAAAAAGGCTGAGGAATTC  1095