BAC Information

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BAC

Clone NameB6Ng01-044B11
Chromosome3 (Build37)
Map Location 105,886,495 - 105,887,036
singlet/doubletsinglet
Overlap genenone
Upstream gene1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819
Downstream geneLOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044B11.bB6Ng01-044B11.g
ACCDH869948DH869949
length1,015954
definitionDH869948|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B11, 5' end.DH869949|Mus musculus domesticus DNA, BAC clone: B6Ng01-044B11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttctaaaacttttttcatgaaggggtgttggattttc
tcaaatgctttcccagcatccaacgagataatcatgtggtttttgtcttt
gagtttgtttatataatggattatgttgatcgatttctgtatattaaacc
atccctgcatccctggaatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcgtgaattttattgactatttttgc
atcgatagtcataagggaaattggtctgaaattctctatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcatcatagaatgaattg
ggttgagtaacttctgcttctattttgtggaatagtttgtgcagtactgg
aattaagtcttctttgaaggtttgatagaactctgcactaaaccctggct
aaatcctgggctgtttttggttgggagactattaatgactgcttctattt
ctttaggggatataggactgtttagatcattaacctgatcttgatttaac
tttggtacctggtatctgtctagaaatttgtccatttcatctaggttttc
cagttttgttgagtatagccttttgtagaaggatctgatggtgttttgga
tttcttcagggtctgttgttatgcctccttttcatttctgattttgttaa
ttaggatgctgtccccgtgccctctaatgaatctggctaagggtttatct
atcttgttgatttttctgaaagtaaaagctccttgtttgttgattctttg
atagttcttcctgtttccacttggttgatttcacccctgagtttgattat
ttcctgctgtctactcctcttgggtgaatttgctttcctttttttctaga
gcttttaggtgtgttgtaaactgctagtgtgttgctctctctagtttctt
tttggaggcactcagagctaatgagttttcctcttagaaatgtttttcac
tgtggtcccataagt
gaattcttcatttccaatttgtattcctttatctctttttgttgtcgaat
tgctctggctaggacttcaactacaacgttgaataggtatggagaaagtg
ggtagaattttattgagtatttttgcatcgatattcataaggggaattgg
tctgaagttctctatctctatttgatctttatgtggtttaggtatcagag
taaatgtggcttcatagaatgaattgggttgagtaccttctgtttctgtt
ttgtagaatatcttgagaagctctggaattaagtcttctttgaaggtctg
ataaaactctgcactaaacccatctggtcctgggtttttttttttttttt
ttttttttggttgggagactattcatgactgtttctatttccttagggga
ttgagactgtttaggtcattaatctgatccagatttaactttggtacctg
gtatctgtctagaaatttgtccatttcttccaggatgtccagttttgttg
agtatggcatttttagtaggatctgatggtgttctggattttcttgcacc
cggggatccatcccataattggccaccaaatgcagtcactattgcatatg
ggaggaagatttccctggaacgaccctgatatagctatctcgagtgaggc
tatgcgagtgcctggcaaatacagtagaggttgctcacagtcacctatag
gatggaacacagggcctccaatggaggagctagagaaagtacccaaagtg
ctgaagggttctgttaccttttaagtggaacaactattatgaaactaatc
agacccccagagcttgtgtctctagctgcatatgaagcagaagactgcct
atttggcttctttggaaagagaaggccccttgttcttgcaactttatatg
tccctggtcaggggacaccagggcctgatattgtattatgttgtgttggg
tagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_105886495_105887036
seq2: B6Ng01-044B11.b_518_1061 (reverse)

seq1  ACTTATGGGA-CACAATG-AAAGCATTCCTAAGAGGAAAACTCA-TAGCT  47
      |||||||||| |||| || ||| |||| |||||||||||||||| |||||
seq2  ACTTATGGGACCACAGTGAAAAACATTTCTAAGAGGAAAACTCATTAGCT  50

seq1  CTGAGTGCCTCCAAAAAGAAACTAGAGAGAGC-ACACATTAGCAGCTTGA  96
      |||||||||||||||||||||||||||||||| ||||| |||||| || |
seq2  CTGAGTGCCTCCAAAAAGAAACTAGAGAGAGCAACACACTAGCAG-TTTA  99

seq1  CAACACACCTAAAAGCTCTAGAAGAAAAGG-AAGCAAATTCACCCAAGAG  145
      ||||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  CAACACACCTAAAAGCTCTAGAAAAAAAGGAAAGCAAATTCACCCAAGAG  149

seq1  GAGTAGAAGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGG  195
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGACAGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGG  199

seq1  AAACAAGAAGAACTATTCAAAGAATCAACCAATCAAGGAGCTGGTTCTTT  245
      ||||| ||||||||| |||||||||||| ||| |||||||||  | ||||
seq2  AAACAGGAAGAACTA-TCAAAGAATCAA-CAAACAAGGAGCTTTTACTTT  247

seq1  GAG-AAAATCAACAAGATAGATAAACCCTTAGCCAGACTCACTAGAGGGC  294
       || ||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  CAGAAAAATCAACAAGATAGATAAACCCTTAGCCAGATTCATTAGAGGGC  297

seq1  ACAGGGAAAGCATCCTAATTAACAAAGTCAGAAATGAAAAGGGAGACATA  344
      || |||| |||||||||||||||||| ||||||||||||| |||| ||||
seq2  ACGGGGACAGCATCCTAATTAACAAAATCAGAAATGAAAA-GGAGGCATA  346

seq1  ACAACAGATCATGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAG  394
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGACCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAG  396

seq1  GTTATACTAAACAAAACTGGAAAACCTGGATGAAATGGACAAGTTTCTAG  444
      | |||||| |||||||||||||||||| |||||||||||||| |||||||
seq2  GCTATACTCAACAAAACTGGAAAACCTAGATGAAATGGACAAATTTCTAG  446

seq1  AGAGATACCAGGTACCAAAGCTAAATCAAGATCAGGTTAGTGATCTCAAC  494
      | |||||||||||||||||| |||||||||||||||||| |||||| |||
seq2  ACAGATACCAGGTACCAAAGTTAAATCAAGATCAGGTTAATGATCTAAAC  496

seq1  AGTCCTATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCA  544