BAC Information

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BAC

Clone NameB6Ng01-044D10
Chromosome3 (Build37)
Map Location 67,184,076 - 67,371,981
singlet/doubletdoublet
Overlap geneMlf1, Gfm1, Lxn, Rarres1
Upstream geneLOC625115, Shox2, Rsrc1
Downstream geneMfsd1, LOC667207, Gm412, EG208426, EG545531, LOC631379
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044D10.bB6Ng01-044D10.g
ACCDH870034DH870035
length1,0501,076
definitionDH870034|Mus musculus domesticus DNA, BAC clone: B6Ng01-044D10, 5' end.DH870035|Mus musculus domesticus DNA, BAC clone: B6Ng01-044D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,370,926 - 67,371,981)(67,184,076 - 67,185,095)
sequence
gaattcatgcattagagtaaaaaaaatgaactttggttctgtgacatttc
atagagtgtttgggctgtgtagcctagtagcagaagctaatgactgggga
aaaccttaaaggtggtgactatttagggtcccttgctcttatcatgagaa
gctgccagtgtctggctaaccactgcagacaccatgccttccttgccatg
acagactgcatcccttcaaactgtgagccaaaataaatgtctcctccctt
agcatggttttgtcagaatataagaattgcaacagtgcagagttacgtat
ggttcaactcctccccctcctaaccccacacgcacggttatcaccctctg
atctgtacgtatttcagcatatgtacacattaagtgacctggtttgtcga
gcatgtcagaaaggctggtgatctgcttgacctgagaagccttcggttcg
gtccggttcggttctcacctccaccattcctcccccaagcttcaaagcta
aacatcgtaattggttcctgctttaggcctttaaaaaggagaggggtgag
gagcaacatttcaaagccaggcagggctgtatatcaagccctgtccaaaa
gcagcagtatcagttgtctacctaacttctattgagaaatgttctataag
atttcacagaggtttccctcactcttaccagcttatacacctttccatat
tcttccaccccatcccatatcatcaaacacatttgtcccgaattgcgatg
cagttggcacatctccagggttctgttattacaaaatatgttttgcaata
atcttgagtacgataactgttctattatctgaaggaattgtgggcttttt
tttttttaggctaaggagggattcatgcattagagtaaaaaatgaacttt
gctaaatattgccaaattttcttgttggaagtgctgcagcattttgtgtt
atgaatccaccattttagcatgtactggaacaaagcagagagttgaccaa
ttagctagaaacctataaatagcccacttagctgcagactcctgcgccta

gaattccaagagaatacaaacagctgaatgaaatgaggttaatatgagat
ttgaagatggaattcagaaaagagaaattgagaaggaaatcaatttgaaa
tgctggacatgaaatatccattaaatcaaataaaaagctcaatgaaaatc
ttcatcaacagaatgggtcaaggggaggacagaatggtggagctttaaaa
caaggtggatgaagtaggaaaactcagttatgaagaaaaattaataagaa
aatacaaagaaaatatacaagaatataagatctagggacactgtggaaaa
gatcaaatctatgaatcgtgaatgcagaagagtttcatgttttcaatgaa
atcataatagaaaatttcctaaatctaggaaaagaagtgtttatccagga
actggagatatttaggtttttcaactcaatgaaaccagaaaaacttctca
taccaagtagttaaaaattaaatatggaaagcagagaaagtatactaaag
ttatgagaatagcacgagtcatatataaagacaggcttatcagagtaaaa
atagatttctcaagagaaactctaaaaaccaggcaagcttggagtgtatt
tcaagctctggaagatttcagttcaggtaattatagctagcaaaactatc
tgtcatagtagaaagagaaagaaaggctttccataatacaaactaataca
agggattgataatcactaaggcagctctttagacacttgagtcattcaga
ctgaggagaaagataaacatcgacaagtctacaggaatggtagctgtgct
gaaacaatagttaagcaaattagcaataagaaaatactaagcctatccta
acaaaacttaacaatctatgcctatcagtattaatggtcttaaatctcta
attaaagatcaatataagctttctatttgttgtcttcaaagaatagccac
aaaccaaggttaaaaggatggggaaaatgcttcaagcagtgctaggaagc
agcagatttctctgttcttgggtaacaaataagactttaggaagtatcat
gacgagattatcccattctgagctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67370926_67371981
seq2: B6Ng01-044D10.b_47_1096 (reverse)

seq1  TAGGCGCAGGAGTCTGCAGCTAAGTGGGCTTATTTATAGGTTTTCTAGCT  50
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  TAGGCGCAGGAGTCTGCAGCTAAGTGGGC-TATTTATAGG-TTTCTAGCT  48

seq1  TATTGGTCTACCTCTCTGCTTTTGTTCCAGTACCATGCTAAAATGGTGAT  100
       ||||||| | |||||||| |||||||||||| |||||||||||||||  
seq2  AATTGGTC-AACTCTCTGC-TTTGTTCCAGTA-CATGCTAAAATGGTG-G  94

seq1  TTTCATAACACAAAATGCTGCAGCACTTCCAACAAGAAAATTTGGCAATA  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAACACAAAATGCTGCAGCACTTCCAACAAGAAAATTTGGCAATA  144

seq1  TTTAGCAAAGTTCATTTTTTACTCTAATGCATGAATCCCTCCTTAGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAAAGTTCATTTTTTACTCTAATGCATGAATCCCTCCTTAGCCTA  194

seq1  AAAAAAAAAAAGCCCACAATTCCTTCAGATAATAGAACAGTTATCGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGCCCACAATTCCTTCAGATAATAGAACAGTTATCGTACT  244

seq1  CAAGATTATTGCAAAACATATTTTGTAATAACAGAACCCTGGAGATGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTATTGCAAAACATATTTTGTAATAACAGAACCCTGGAGATGTGC  294

seq1  CAACTGCATCGCAATTCGGGACAAATGTGTTTGATGATATGGGATGGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCATCGCAATTCGGGACAAATGTGTTTGATGATATGGGATGGGGT  344

seq1  GGAAGAATATGGAAAGGTGTATAAGCTGGTAAGAGTGAGGGAAACCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATATGGAAAGGTGTATAAGCTGGTAAGAGTGAGGGAAACCTCTG  394

seq1  TGAAATCTTATAGAACATTTCTCAATAGAAGTTAGGTAGACAACTGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTTATAGAACATTTCTCAATAGAAGTTAGGTAGACAACTGATAC  444

seq1  TGCTGCTTTTGGACAGGGCTTGATATACAGCCCTGCCTGGCTTTGAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTTTGGACAGGGCTTGATATACAGCCCTGCCTGGCTTTGAAATG  494

seq1  TTGCTCCTCACCCCTCTCCTTTTTAAAGGCCTAAAGCAGGAACCAATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCTCACCCCTCTCCTTTTTAAAGGCCTAAAGCAGGAACCAATTAC  544

seq1  GATGTTTAGCTTTGAAGCTTGGGGGAGGAATGGTGGAGGTGAGAACCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTAGCTTTGAAGCTTGGGGGAGGAATGGTGGAGGTGAGAACCGAA  594

seq1  CCGGACCGAACCGAAGGCTTCTCAGGTCAAGCAGATCACCAGCCTTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACCGAACCGAAGGCTTCTCAGGTCAAGCAGATCACCAGCCTTTCTG  644

seq1  ACATGCTCGACAAACCAGGTCACTTAATGTGTACATATGCTGAAATACGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTCGACAAACCAGGTCACTTAATGTGTACATATGCTGAAATACGT  694

seq1  ACAGATCAGAGGGTGATAACCGTGCGTGTGGGGTTAGGAGGGGGAGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCAGAGGGTGATAACCGTGCGTGTGGGGTTAGGAGGGGGAGGAGT  744

seq1  TGAACCATACGTAACTCTGCACTGTTGCAATTCTTATATTCTGACAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCATACGTAACTCTGCACTGTTGCAATTCTTATATTCTGACAAAAC  794

seq1  CATGCTAAGGGAGGAGACATTTATTTTGGCTCACAGTTTGAAGGGATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAAGGGAGGAGACATTTATTTTGGCTCACAGTTTGAAGGGATGCA  844

seq1  GTCTGTCATGGCAAGGAAGGCATGGTGTCTGCAGTGGTTAGCCAGACACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCATGGCAAGGAAGGCATGGTGTCTGCAGTGGTTAGCCAGACACT  894

seq1  GGCAGCTTCTCATGATAAGAGCAAGGGACCCTAAATAGTCACCACCTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTTCTCATGATAAGAGCAAGGGACCCTAAATAGTCACCACCTTTA  944

seq1  AGGTTTTCCCCAGTCATTAGCTTCTGCTACTAGGCTACACAGCCCAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCCCCAGTCATTAGCTTCTGCTACTAGGCTACACAGCCCAAACA  994

seq1  CTCTATGAAATGTCACAGAACCAAAGTTCATTTTTTTTACTCTAATGCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGAAATGTCACAGAACCAAAGTTCATTTTTTTTACTCTAATGCAT  1044

seq1  GAATTC  1056
      ||||||
seq2  GAATTC  1050

seq1: chr3_67184076_67185095
seq2: B6Ng01-044D10.g_267_1145

seq1  AAACAAGGTGGATGAAGTAGGAAAACTCAGTTATGAAGAAAAATTAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGTGGATGAAGTAGGAAAACTCAGTTATGAAGAAAAATTAATAA  50

seq1  GAAAATACAAAGAAAATATACAAGAATATAAGATCTAGGGACACTGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACAAAGAAAATATACAAGAATATAAGATCTAGGGACACTGTGGA  100

seq1  AAAGATCAAATCTATGAATCGTGAATGCAGAAGAGTTTCATGTTTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAAATCTATGAATCGTGAATGCAGAAGAGTTTCATGTTTTCAAT  150

seq1  GAAATCATAATAGAAAATTTCCTAAATCTAGGAAAAGAAGTGTTTATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATAATAGAAAATTTCCTAAATCTAGGAAAAGAAGTGTTTATCCA  200

seq1  GGAACTGGAGATATTTAGGTTTTTCAACTCAATGAAACCAGAAAAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGGAGATATTTAGGTTTTTCAACTCAATGAAACCAGAAAAACTTC  250

seq1  TCATACCAAGTAGTTAAAAATTAAATATGGAAAGCAGAGAAAGTATACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCAAGTAGTTAAAAATTAAATATGGAAAGCAGAGAAAGTATACTA  300

seq1  AAGTTATGAGAATAGCACGAGTCATATATAAAGACAGGCTTATCAGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGAGAATAGCACGAGTCATATATAAAGACAGGCTTATCAGAGTA  350

seq1  AAAATAGATTTCTCAAGAGAAACTCTAAAAACCAGGCAAGCTTGGAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGATTTCTCAAGAGAAACTCTAAAAACCAGGCAAGCTTGGAGTGT  400

seq1  ATTTCAAGCTCTGGAAGATTTCAGTTCAGGTAATTATAGCTAGCAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGCTCTGGAAGATTTCAGTTCAGGTAATTATAGCTAGCAAAACT  450

seq1  ATCTGTCATAGTAGAAAGAGAAAGAAAGGCTTTCCATAATACAAACTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCATAGTAGAAAGAGAAAGAAAGGCTTTCCATAATACAAACTAAT  500

seq1  ACAAGGGATTGATAATCACTAAGGCAGCTCTTTAGACACTTGAGTCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGATTGATAATCACTAAGGCAGCTCTTTAGACACTTGAGTCATTC  550

seq1  AGACTGAGGAGAAAGATAAACATCGACAAGTCTACAGGAAATGGTAGCTG  600
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGACTGAGGAGAAAGATAAACATCGACAAGTCTACAGG-AATGGTAGCTG  599

seq1  TGCTGAAACAATAGTTAAGCAAATTAGCAATAAGAAAATACTAAGCCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAACAATAGTTAAGCAAATTAGCAATAAGAAAATACTAAGCCTAT  649

seq1  CCTAACAAAACTTAACAAATCTATGCCTATCAGTATTAATGGTCTTAAAT  700
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTAACAAAACTTAAC-AATCTATGCCTATCAGTATTAATGGTCTTAAAT  698

seq1  CTCTAATTAAAAGATCAATATAAGCTTTCTATTTGTTGTCTTCAAAG-AT  749
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  CTCTAATT-AAAGATCAATATAAGCTTTCTATTTGTTGTCTTCAAAGAAT  747

seq1  AGCCACAAACCAAGGGTAAAAGGATGGGGAAAATGCTTCAAGCAAGTGGC  799
      ||||||||||||||| ||||||||||||||||||||||||||| ||| ||
seq2  AGCCACAAACCAAGGTTAAAAGGATGGGGAAAATGCTTCAAGC-AGT-GC  795

seq1  TAGGAAGCAAGCAGATATCTCTGTTCTTGTGTAACAAAATAGACTTTAAG  849
      |||||||| ||||||| |||||||||||| ||||||||  ||||||| ||
seq2  TAGGAAGC-AGCAGATTTCTCTGTTCTTGGGTAACAAATAAGACTTT-AG  843

seq1  GAAGTAATCAATGACGAGAATATTCCCATTCTAGAG-GCACACACACACA  898
      ||||| ||| ||||||||| || ||||||||| |||  ||          
seq2  GAAGT-ATC-ATGACGAGATTA-TCCCATTCT-GAGCTCA----------  879

seq1  CACACACACACACACACGACTTTAAGAAAAACCCAACACTGTAAAAATTC  948
                                                        
seq2  --------------------------------------------------  879

seq1  ATTTCAATACCTGTGGGAAAACTCTGCTAATTAAAGTCAAAGTCCACCAT  998
                                                        
seq2  --------------------------------------------------  879

seq1  GACCAGATAGCCTCTGAGCTCA  1020
                            
seq2  ----------------------  879