BAC Information

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BAC

Clone NameB6Ng01-044J12
Chromosome3 (Build37)
Map Location 41,059,406 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044J12.bB6Ng01-044J12.g
ACCDH870302DH870303
length9661,234
definitionDH870302|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J12, 5' end.DH870303|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagcgccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatatttgtccc
ctatctgatttaggataggtaaaggtcctttcacactctgttgggggcat
ttttgtcctattgacagtgtcttttgctttgcagaagctttgcaattttt
tgaggttccatttgtcgattctagatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccgtac
tttcccctctataagtttcagtgtctctgttttttttttccattttttaa
ttaggtatttagctcatttacatttccaatgctataccaaaagtccccca
tacccacctaccaccactctcctacccacccactccccctttttggccct
ggcgttcctctgtactggggcatataaagtttgcgtgtccaatgggcctc
tctttccagtgatggccgactaggccatcttttgatacatatgcagctag
agtcaagagctccggtgtactggttagttcataatattgttccacctata
gggttgcagatccctttagctccttgggtactttctctagctcctccatt
gggagccctgtgatccatccattagctgactgtgagcatccacttctgtg
tttgctaggccccggcatagtatcacaagagacagctacatctgggtcct
ttcgataaaatcttgctagtgtatgcaatggtgtcagcatttggatgctg
attatggggtggatccctggatatggcagtctctacatggtccatccttt
caactcagctccaaactttgtctctgtaactccttccatggtgttttgtt
cccaattctaagaggggcatagtgtccacacttcagtcttgatttttctt
gagtttcatgtgttta
gaattctgaaggaataagttctagcagatgcactggcaattaagtgtaag
cagacaaagaagagtgtgccttcctactttcaatgtcctcatgtagacct
ccagcagaaggtgggtcccagattaatggtatgtaccaccatgcctggat
ttgacacttgctgtctcatattctggccttgaactcagggatctacttgc
ttcagtctcctgagattaaaggtatctactaccttgcctgggcctaagct
gttcatggatataataactcagtatctgaattaaaagcatgtgtcatctt
atgtcaacatccaggtcagaagcctgtattgttcaacctcaatatctgga
tcacaggtgtgccctcaatttttggattttagttaattccggatttagta
aaaattgtcaagtaggcaaagccatcacagattcccacatttcttggaag
ttttgttgtttctttgacagttgtattcatttgttttatttattctacac
ttgggatttcctcatccatctcttgtattctgttggctgtgcttgtatct
gttgttcctggttttacatatccctgattcgctcattttgtgttttcttc
gttggttctatttccatcttctggtctataacagtttatttccttcacct
atttttctgtatatcttaagaggtttaattgttttctctttaaaaacttc
cacatatttaattgtaagttactatatttcatatttttaaaaaaattatt
ggatattttctttattgacatttcaaagttatcccctttcctggtttccc
tgctagaaacctcccaacccaccccttctgcccctgcttctaagtgtgtg
ttcccttatctgctcacccactacagcctccccaccctgacattccccta
cactgaggcatcaagacttcacaggaccaagggcttctcccacattgatg
cctaacaaggccatcctctgctacatgtttgactggagtcatgggtcctc
catgtatactccttggttggtggttagttcttggggttctgggtttttct
tcctttagttgcaatcccctcatacttttatccaactcctctatctgggt
ccatgctaatcagtgattggcttggcttatacctccctcgtaattgtccc
agctctgcgaaccttagagaacctatatagaatccgagcaaagcttgtcc
tcacaaaagtttgctgtggcagatgatagtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059406_41059737
seq2: B6Ng01-044J12.b_47_379 (reverse)

seq1  AAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTG  50
      |||| |||||||||||||||||||||||| ||||||  |||||||||| |
seq2  AAAAACAGAGACACTGAAACTTATAGAGGGGAAAGTACGGAAAAGCCTCG  50

seq1  AAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGT  100
      |||||||||  |||||||||||||||||| ||||||||||||||||||||
seq2  AAGATATGGGTACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGT  100

seq1  GCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTT  150
      ||||||||||  ||||| ||||||||| ||||||  ||| ||||||||||
seq2  GCTGTAAGATCTAGAATCGACAAATGGAACCTCAAAAAATTGCAAAGCTT  150

seq1  CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAA-GGCACCAACAGATT  199
      |||||| ||||||||||| ||||||| |||||||| | | |||||||| |
seq2  CTGCAAAGCAAAAGACACTGTCAATAGGACAAAAATGCCCCCAACAGAGT  200

seq1  GGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAAT  249
      | ||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  GTGAAAGGACCTTTACCTATCCTAAATCAGATAGGGGACAAATATCCAAT  250

seq1  ATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCAT  299
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  ATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCAT  300

seq1  TAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  332
      |||||||||| ||||||||||||||||||||||
seq2  TAAAAAATGGCGCTCAGAGCTAAACAAAGAATT  333