BAC Information

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BAC

Clone NameB6Ng01-045F20
Chromosome3 (Build37)
Map Location 119,219,716 - 119,220,388
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045F20.bB6Ng01-045F20.g
ACCDH870840DH870841
length6771,153
definitionDH870840|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F20, 5' end.DH870841|Mus musculus domesticus DNA, BAC clone: B6Ng01-045F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataacttttacatatgcatcatagcataagtaaatgaatgctt
ccctctccattctttttcttccatctccatacctataaccacaacccagt
gtattaccccctcaacagcttaatatcatatccttgacaattacatcaca
ggaatagatatatgtgtgtgggttggttggaaaagtgaatagtagaaaac
ttagttcttcacgtgaaatccttgaaatgactgggataggaaataacatg
acaagaatccttagatgaggctcatccttccaggacatatgactcccatt
ttagtttctaagttttttttaaggccgaatcttttccacaacatcatctc
tctcttaaatgctgttgtttctacacaaatccatcattcctctctcctgc
ctcactcttccctatccttctagaatgctctccttaagaagggatttgtc
ttatctttgggagaagttttcatttgattaacaaatctttctgcttgttt
tgtgagacaaattttagcctcataaagacacactggactcctctttaaac
ctgtgctatgttctaaagtttcttttacagtaatctacacaagttgtgtc
tactcaaatctttttctaaattctcaagtttctccatgactatgaatttt
tgatatagggagtggggatatctctaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtgaaaatagctgagatcaaaaattcaggtgacagc
agatgctggcctggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaagaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggagacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggaaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatacaagatccaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccattgaagtgggaa
caaaatacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtggagactgccatatccagggaaccaccccataatc
agcatccaaacgctgacaccattgcgtacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctaccaacac
agagtggatgcttcacagtcatctaatggatggatcacaggctccaatga
gagctagagaaagtacccagagctaagggatctgcatctatagtgatcac
attatgactacagtgctcagagctttgactcttagctgcttgtatcaagt
gcttatcagcatcactgaagagagtccatttggacacgcaactttatatt
tctccatgacagggaacctccgaggccaaaagagtgagatggtggtgttg
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119219716_119220388
seq2: B6Ng01-045F20.b_41_717 (reverse)

seq1  TTAGAGATATCCCCACT-CCTATATCAAAAGTTCATGGTCATGGAGAAAC  49
      ||||||||||||||||| |||||||||||| ||||| |||||||||||||
seq2  TTAGAGATATCCCCACTCCCTATATCAAAAATTCATAGTCATGGAGAAAC  50

seq1  TTGAGAATTTAG-AAAAGATTTGGGTAGACACAACTTGTGTAGATTACTG  98
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  TTGAGAATTTAGAAAAAGATTTGAGTAGACACAACTTGTGTAGATTACTG  100

seq1  T-AAAGAAACTTTAGAACATAGCACAGGTTT-AAGAGGAGTCCAGTGTGT  146
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAAAGAAACTTTAGAACATAGCACAGGTTTAAAGAGGAGTCCAGTGTGT  150

seq1  CTTTATGAGGCTAAAATTTGTCTCACAAAACAAGCAGAAAGATTTGTTAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGAGGCTAAAATTTGTCTCACAAAACAAGCAGAAAGATTTGTTAA  200

seq1  TCAAATGAAAACTTCTCCCAAAGATAAGACAAATCCCTTCTTAAGGAGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAAAACTTCTCCCAAAGATAAGACAAATCCCTTCTTAAGGAGAG  250

seq1  CATTCTAGAAGGATAGGGAAGAGTGAGGCAGGAGAGAGGAATGATGGATT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAGAAGGATAGGGAAGAGTGAGGCAGGAGAGAGGAATGATGGATT  300

seq1  TGTGTAGAAACAACAGCATTTAAGAGAGAGATGATGTTGTGGAAAAGATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGAAACAACAGCATTTAAGAGAGAGATGATGTTGTGGAAAAGATT  350

seq1  CGGCCTTAAAAAAAACTTAGAAACTAAAATGGGAGTCATATGTCCTGGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCTTAAAAAAAACTTAGAAACTAAAATGGGAGTCATATGTCCTGGAA  400

seq1  GGATGAGCCTCATCTAAGGATTCTTGTCATGTTATTTCCTATCCCAGTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGCCTCATCTAAGGATTCTTGTCATGTTATTTCCTATCCCAGTCA  450

seq1  TTTCAAGGATTTCACGTGAAGAACTAAGTTTTCTACTATTCACTTTTCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGATTTCACGTGAAGAACTAAGTTTTCTACTATTCACTTTTCCA  500

seq1  ACCAACCCACACACATATATCTATTCCTGTGATGTAATTGTCAAGGATAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCACACACATATATCTATTCCTGTGATGTAATTGTCAAGGATAT  550

seq1  GATATTAAGCTGTTGAGGGGGTAATACACTGGGTTGTGGTTATAGGTATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAGCTGTTGAGGGGGTAATACACTGGGTTGTGGTTATAGGTATG  600

seq1  GAGATGGAAGAAAAAGAATGGAGAGGGAAGCATTCATTTACTTATGCTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAAGAAAAAGAATGGAGAGGGAAGCATTCATTTACTTATGCTAT  650

seq1  GATGCATATGTAAAAGTTATGGAATTC  673
      |||||||||||||||||||||||||||
seq2  GATGCATATGTAAAAGTTATGGAATTC  677