BAC Information

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BAC

Clone NameB6Ng01-045M21
Chromosome3 (Build37)
Map Location 106,259,595 - 106,260,019
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819, LOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070
Downstream gene2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432, Kcna2, Kcna10, Gm131, A630076J17Rik, Prok1, Hbxip, Slc16a4, Rbm15, LOC383901, Kcnc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045M21.bB6Ng01-045M21.g
ACCDH871155DH871156
length1,054419
definitionDH871155|Mus musculus domesticus DNA, BAC clone: B6Ng01-045M21, 5' end.DH871156|Mus musculus domesticus DNA, BAC clone: B6Ng01-045M21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccatgttccccatcatcctgatgcagctggtctg
atagaaagttagaatggccttttgaagacgcagttacagcgccaattagg
tggtaatagcatgaaaggctggggcagagttcttcagaaggcagtatatg
ctttgaatcagcactcgatatatggtacagtttcacccatagccaggatc
catgggtccaggaatcaagtggtggaaaaggaaatagttccactcactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataattc
taggttctgcaggcctagaagttttggctccagaggtgggagtgctccta
ccaggagttacaacaaacattccattgaactggaagctcagacatccccc
tgatcattttgggcttctaatgcccttaaaccaacaggctaaagaggaat
aacagtgttaggaggggtgatagatccagattaccatggggaaattggat
tacctcttcacaatggattatgtctggaatgtaggagatcccttagggca
tctcttagtactaccatgtcctgtgattaaagtcaatgggaaactacaac
agcttaatccaagccagatgacaaaggacacaaacccatcaggaatgaag
gtgtgggtcaatcctccaggaaaagagccaagacccgctgaggtgctggc
tgaaggtgaaggaaatacacaatgggtagtagaggaaggtagttttaaaa
taccaattaaggccatgtaacccagttgcagaaacgagggattataaagt
aatatgaatgtccctgtcttattttgctaacgaatatatttgtctttctt
ccaatttctttaacatcaatttgtatttcttccatttctttacatcgatt
tgtatttaagttgagacactaaaaggatgttccaagggacatgccccttg
taaatttacaagtgtacgagggatattatatattgttagatgattcccac
cctgtaattgtgtcttggaaacaaaaaaattatttggggacagtgaataa
gggt
cagcctcttgtcagagccagatatagagagacagatagttaccctttctt
acaatctttctggaagaatgacattttcttaagtgatgctgactgcagta
tgtgctcatagctagttttctcgttgactgttggtagagatgtaggccaa
tgagaatcagatgtctaaatagagagaattagaaaatttacaacttgagt
acataatgaaacaggtggttttaagctcttctgagtggtctattaacttg
gttgtttaagacccttcccagttagcatgaatggggtctagaggggtact
agcgggagacttgctggttgcgaacaccaaatcttggtagaggacagaga
ctgaagcgacagtaactgaaggatggatgctcacagcatccaagctgggg
gagggatggtgtggattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_106259595_106260019
seq2: B6Ng01-045M21.g_66_490

seq1  GAATTCCAGCCTCTTGTCAGAGCCAGATATAGAGAGACAGATAGTTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCTCTTGTCAGAGCCAGATATAGAGAGACAGATAGTTACCC  50

seq1  TTTCTTACAATCTTTCTGGAAGAATGACATTTTCTTAAGTGATGCTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACAATCTTTCTGGAAGAATGACATTTTCTTAAGTGATGCTGACT  100

seq1  GCAGTATGTGCTCATAGCTAGTTTTCTCGTTGACTGTTGGTAGAGATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGTGCTCATAGCTAGTTTTCTCGTTGACTGTTGGTAGAGATGTA  150

seq1  GGCCAATGAGAATCAGATGTCTAAATAGAGAGAATTAGAAAATTTACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATGAGAATCAGATGTCTAAATAGAGAGAATTAGAAAATTTACAAC  200

seq1  TTGAGTACATAATGAAACAGGTGGTTTTAAGCTCTTCTGAGTGGTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTACATAATGAAACAGGTGGTTTTAAGCTCTTCTGAGTGGTCTATT  250

seq1  AACTTGGTTGTTTAAGACCCTTCCCAGTTAGCATGAATGGGGTCTAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGTTGTTTAAGACCCTTCCCAGTTAGCATGAATGGGGTCTAGAGG  300

seq1  GGTACTAGCGGGAGACTTGCTGGTTGCGAACACCAAATCTTGGTAGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTAGCGGGAGACTTGCTGGTTGCGAACACCAAATCTTGGTAGAGGA  350

seq1  CAGAGACTGAAGCGACAGTAACTGAAGGATGGATGCTCACAGCATCCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTGAAGCGACAGTAACTGAAGGATGGATGCTCACAGCATCCAAG  400

seq1  CTGGGGGAGGGATGGTGTGGATTAA  425
      |||||||||||||||||||||||||
seq2  CTGGGGGAGGGATGGTGTGGATTAA  425