BAC Information

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BAC

Clone NameB6Ng01-046P14
Chromosome3 (Build37)
Map Location 157,859,730 - 157,860,848
singlet/doubletsinglet
Overlap geneLrrc7
Upstream geneNegr1, LOC546818, Zranb2, Ptger3, LOC433686, LOC624684, Cth, Ankrd13c, Sfrs11, Lrrc40
Downstream geneLOC100041008, LOC668905
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046P14.bB6Ng01-046P14.g
ACCDH871967DH871968
length1,1471,098
definitionDH871967|Mus musculus domesticus DNA, BAC clone: B6Ng01-046P14, 5' end.DH871968|Mus musculus domesticus DNA, BAC clone: B6Ng01-046P14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
attaggggtgccatgcactcactctcatatggagaggttcctcggaattg
ttctacatgataactgccgttgtgccagcaccatttgttgaaaatgctgt
cttttttccactggatggttttagctcccttgtcaaagatcaagtgacca
taggtgtgtgggttcatctctggatcttcaattctgttccattggtctac
ttgtctgtcgctataccagaaccatgcagtttttatcacaactgctctgt
agtacagctttaggtcaggcatggtgattccaccagagtttcttttatcc
ttgagaagagtttttgctatcctaggttttttgttattccagatgaattt
gcagattgctctttctaattcattgaagaattaagttggaattttgatgg
ggattgcattgaatctgtagattgcttttggcaagatagccatttttaca
atgttgatcctgccaatccatgagcatgggagatctttccatcttctgag
atcttctttaagttctttcttcagagacttgaagttcttataatacaaat
ctttcaattccttagttagaatcatgccaaggtattttatattatttgtg
actattgaggagggtgttgtttccctaatttcgttctcagcctgttatcc
tttgtgtagagaaaggccattgacttgtttgagttaattttatattcagc
tacttcaccgaagctgtttatcatgtttaggagatctctggtgaaatttt
tagggtcacttatatatactatcatatcatctgaaaaaagtgatattttg
acttcatcttttccaatttgtatccccttgatctccttttgttgtcgaat
tgctctggctaggacttcaagtactatgttgaagaggtagggagaaagtg
ggcagccttgtctagtccctgatttagtgggattgcttccagcttctcac
atttaaattgatgttggctactgtttgctgtagatgcttttatcatggtt
agtatgggctttgatctgatatttccagacttttatcttggtggtgttga
tttgtcaatgctttccctgcattctagagatgatcatgtgttttgtcttg
agtgttattaattggatacgtgaatagagtcccgtatatgaccttac
gaattcagttttcttgcatttgacccagtgaagaaagttcagggcctaag
catataattgggaagtgaaatttgaaggaaataaaattgataaggaaaat
tgcttttattcaaacctcaaagaaccacatatctctctgttaggagaaat
ggatgtgactacagaagcatactggatggtctggatattttgtcagtgtt
tgaggtgtttactggtctccaaaatagaatgcttaaatttaaatttttga
attgttcactctttagaggtaaaactttccagacaaattgctgcttatcc
acttggtagaggacagaggggacaagaaaaggcagggataaattcaccat
ctatcctgtatggtgctggctgtgtcaagtatccttaatagtaataaaca
cagcttttttttttaaactgactcttttttttccttgagtatacttaact
ctgtcatgtgaaagggcttatatactccacaccaggaagaggtggccaaa
acctgatggcatgcccttgcaagaaggatcccacatgactttgtgctgga
gatgtcttattctgatatctcatttcatatattgtcaataaaatcatgcc
agtgaaacacagaacatacatagtcattaacatattataaacaaaatgct
ttggcaatttaagttcaaatcagttaataaaaaatgtgcagtatatttta
tcctttaaggcaatgttgagattttatcttcgagttttttttttaagatt
tatttattttatacatatgaatacactgctgctgtcttcagacacaccag
aagagggcatcaaattccattagagatggttgtgagccattctgggaatt
gaactcaggacctccagaagagcagttagtgctcttaactgctaaaccat
ctatccagcccagttttttgtttttgtttttttcatgtggatagcaaatc
aaaaatatatcaacttctatatatacaaaatcattagagtgtatttcata
atatatacatttacaggacttaaaactgatcccttacaagaaaatattta
ctgatttattctggctgctagtataaaaatcagatctttctggaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_157859730_157860848
seq2: B6Ng01-046P14.g_68_1165

seq1  GAATTCAGTTTTCTTGCATTTGACCCAGTGAAGAAAGTTCAGGGCCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTCTTGCATTTGACCCAGTGAAGAAAGTTCAGGGCCTAAG  50

seq1  CATATAATTGGGAAGTGAAATTTGAAGGAAATAAAATTGATAAGGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATTGGGAAGTGAAATTTGAAGGAAATAAAATTGATAAGGAAAAT  100

seq1  TGCTTTTATTCAAACCTCAAAGAACCACATATCTCTCTGTTAGGAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTATTCAAACCTCAAAGAACCACATATCTCTCTGTTAGGAGAAAT  150

seq1  GGATGTGACTACAGAAGCATACTGGATGGTCTGGATATTTTGTCAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGACTACAGAAGCATACTGGATGGTCTGGATATTTTGTCAGTGTT  200

seq1  TGAGGTGTTTACTGGTCTCCAAAATAGAATGCTTAAATTTAAATTTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGTTTACTGGTCTCCAAAATAGAATGCTTAAATTTAAATTTTTGA  250

seq1  ATTGTTCACTCTTTAGAGGTAAAACTTTCCAGACAAATTGCTGCTTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCACTCTTTAGAGGTAAAACTTTCCAGACAAATTGCTGCTTATCC  300

seq1  ACTTGGTAGAGGACAGAGGGGACAAGAAAAGGCAGGGATAAATTCACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTAGAGGACAGAGGGGACAAGAAAAGGCAGGGATAAATTCACCAT  350

seq1  CTATCCTGTATGGTGCTGGCTGTGTCAAGTATCCTTAATAGTAATAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGTATGGTGCTGGCTGTGTCAAGTATCCTTAATAGTAATAAACA  400

seq1  CAGCTTTTTTTTTTAAACTGACTCTTTTTTTTCCTTGAGTATACTTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTTTTTTTAAACTGACTCTTTTTTTTCCTTGAGTATACTTAACT  450

seq1  CTGTCATGTGAAAGGGCTTATATACTCCACACCAGGAAGAGGTGGCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATGTGAAAGGGCTTATATACTCCACACCAGGAAGAGGTGGCCAAA  500

seq1  ACCTGATGGCATGCCCTTGCAAGAAGGATCCCACATGACTTTGTGCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATGGCATGCCCTTGCAAGAAGGATCCCACATGACTTTGTGCTGGA  550

seq1  GATGTCTTATTCTGATATCTCATTTCATATATTGTCAATAAAATCATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTATTCTGATATCTCATTTCATATATTGTCAATAAAATCATGCC  600

seq1  AGTGAAACACAGAACATACATAGTCATTAACATATTATAAACAAAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAACACAGAACATACATAGTCATTAACATATTATAAACAAAATGCT  650

seq1  TTGGCAATTTAAGTTCAAATCAGTTAATAAAAAATGTGCAGTATATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATTTAAGTTCAAATCAGTTAATAAAAAATGTGCAGTATATTTTA  700

seq1  TCCTTTAAGGCAATGTTGAGATTTTATCTTCGAGTTTTTTTTTTAAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAGGCAATGTTGAGATTTTATCTTCGAGTTTTTTTTTTAAGATT  750

seq1  TATTTATTTTATACATATGAATACACTGCTGCTGTCTTCAGACACACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTATACATATGAATACACTGCTGCTGTCTTCAGACACACCAG  800

seq1  AAGAGGGCATCAAATTCCATTAGAGATGGTTGTGAGCCATTCTGGGAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGCATCAAATTCCATTAGAGATGGTTGTGAGCCATTCTGGGAATT  850

seq1  GAACTCAGGACCTCCAGAAGAGCAGTTAGTGCTCTTAACTGCTAAACCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGACCTCCAGAAGAGCAGTTAGTGCTCTTAACTGCTAAACCAT  900

seq1  CTATCCAGCCCAAGTTTTTTTGTTTTTTGTTTTTTTTCAATGTTGGATAA  950
      ||||||||||| ||||||||   |||||||||||||   ||| ||||| |
seq2  CTATCCAGCCC-AGTTTTTT--GTTTTTGTTTTTTT--CATG-TGGAT-A  943

seq1  GCAAAATCAAAAAATATATCAAACTTCTATATATACAAAAATCATTAGAG  1000
      || ||||| ||||||||||| ||||||||||||||| |||||||||||||
seq2  GC-AAATC-AAAAATATATC-AACTTCTATATATAC-AAAATCATTAGAG  989

seq1  TGTAATTTCAATATATATACATTTACAGGACTTAAAAACTTGATTCCCTT  1050
      ||| ||||||  |||||||||||||||||||||||||   |||| ||   
seq2  TGT-ATTTCATAATATATACATTTACAGGACTTAAAA--CTGATCCC---  1033

seq1  TTACAAG-AAATATTTAACTGAATTTATATCT-GCTGCTAAGTATAAAAA  1098
      ||||||| |||||||| |||| |||||| ||| |||||| ||||| ||||
seq2  TTACAAGAAAATATTT-ACTG-ATTTAT-TCTGGCTGCT-AGTAT-AAAA  1078

seq1  ATCAGATACTTTCTGGAAACT  1119
      ||||||| |||||||||||||
seq2  ATCAGAT-CTTTCTGGAAACT  1098