BAC Information

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BAC

Clone NameB6Ng01-047D23
Chromosome3 (Build37)
Map Location 49,155,125 - 49,155,821
singlet/doubletsinglet
Overlap gene4932443G14
Upstream gene1700018B24Rik, LOC100039404, EG666230
Downstream geneLOC545519, LOC676568, LOC666247, LOC100039579, LOC100039587, LOC638779, Pcdh18, LOC100039628, LOC639469
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047D23.bB6Ng01-047D23.g
ACCDH872164DH872165
length8731,189
definitionDH872164|Mus musculus domesticus DNA, BAC clone: B6Ng01-047D23, 5' end.DH872165|Mus musculus domesticus DNA, BAC clone: B6Ng01-047D23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttactcagtatagaagacttcttcatggatctctgtgctact
cataccaagtaagatctcatgaacagcttgtctctatctcacgaaatatt
ggtacccatgtgcaagtcctcagggatgtgaaacagttattcttaattgc
tctgccatacctgcagcactatcaaatgatattctttattaataaaatta
atattcaaatacatcatttcactccttcctttctcttgctccatgtttgt
ttcccttcaatctcccaattctgctaaaatccatggcccattttcattta
ctgtttttattatatagataaaaatgagtccataattctgttcaaacaac
cagataagtccattatccttcatagtatatggactatttcttagctaacc
aactgctattggcttaaaattttggggtctcccttagagaaacactaatt
ttctcactctttgtagtatttatgtgcatatagttcttcatctacaattt
ttcttcacaagatttacttattcccagttagtgttactaacctggatgat
gtttttttttcagaaattgttttgataagcaaattatattgttggactat
caaaagtgaaaacacccccatatttctaggatgcccaatctcaaagcaga
tttcctgaatttctgatgtacaatcttccacactcttctaaccaatgttt
ggagcctaaaggttcagaatttagtaggtaatatgaatgcagtgggtctt
ggaggcccaggaaattttgttttctgtactttgaatagctgcagttttct
atatagaatccatctatggccagacaaccttctttgatgtataggtatgg
gctacattatctataaatatagc
gaattctttgtttagctctgtacctcatttttaatgggattatttgattt
tctgtagtccagcttatcaagttctttgtatatattggatattaatcccc
tattggatttaggattggtaaaaatcctttcccaatctgctgatggcttt
ttttttcttattgacagtgtctttggccttacagaagctttgcagtatta
tgagggcctttttgtagattcttgatcttacagcacaagccattagtgtt
ctattcaggaatttttcttctgtgctcatatcttcgaggattttcccctc
tttctactctacaagatttaatgtctctggttttatgtggagttcctgga
tccacttagacttgagctttgtacaaggagatattggatcaattctcttt
cttctacatgataaccgccagttgtaccagcaccatttgttgaaaatgct
gtcttttttccactgggtggttttagctcctttgtcaaagattaagtgtt
cataggtatgtgggttcatttctgggtcttcaattctattccattgatct
acctgtctgtcactgtaccaatactatgcagtttttttttatcactattg
ccatgtagtaaagcttgaggtcagggatggtgattccaccagaagttctt
ttattgttgcgaatagttttgatatcctaggttttctgttattgcagatg
aatttgcaaattgctctttctcactctgtgaagaattaagttgaaatttt
aatggggatttcattgaatctgtagattgcttttggtaagatgtccattt
ttactatattaatcctgctaagccatgagcgtgggagatctttccagctt
ctgggatcttctttgatttctttcttcagagactgagttctacataagat
atttcatttgctagtagagtcacacaggtgatttatatcattgtgtcttt
tctgagtgttttttcctattctttctcagctgttattctttgttaagaga
catgaattgttgaataattgacttcagctactttgtgaagttttacaggg
tagaatcctggtggattcggtcataatgtatatcataagactaaaaggaa
ttgagacattctcctccaaatgtatcctggatcctctatgccatgctgac
aggactttatcttatagaattggagagtgagcaagctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_49155125_49155821
seq2: B6Ng01-047D23.b_41_737

seq1  GAATTCTCTTACTCAGTATAGAAGACTTCTTCATGGATCTCTGTGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTACTCAGTATAGAAGACTTCTTCATGGATCTCTGTGCTACT  50

seq1  CATACCAAGTAAGATCTCATGAACAGCTTGTCTCTATCTCACGAAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAAGTAAGATCTCATGAACAGCTTGTCTCTATCTCACGAAATATT  100

seq1  GGTACCCATGTGCAAGTCCTCAGGGATGTGAAACAGTTATTCTTAATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCCATGTGCAAGTCCTCAGGGATGTGAAACAGTTATTCTTAATTGC  150

seq1  TCTGCCATACCTGCAGCACTATCAAATGATATTCTTTATTAATAAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATACCTGCAGCACTATCAAATGATATTCTTTATTAATAAAATTA  200

seq1  ATATTCAAATACATCATTTCACTCCTTCCTTTCTCTTGCTCCATGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAAATACATCATTTCACTCCTTCCTTTCTCTTGCTCCATGTTTGT  250

seq1  TTCCCTTCAATCTCCCAATTCTGCTAAAATCCATGGCCCATTTTCATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCAATCTCCCAATTCTGCTAAAATCCATGGCCCATTTTCATTTA  300

seq1  CTGTTTTTATTATATAGATAAAAATGAGTCCATAATTCTGTTCAAACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTATTATATAGATAAAAATGAGTCCATAATTCTGTTCAAACAAC  350

seq1  CAGATAAGTCCATTATCCTTCATAGTATATGGACTATTTCTTAGCTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAGTCCATTATCCTTCATAGTATATGGACTATTTCTTAGCTAACC  400

seq1  AACTGCTATTGGCTTAAAATTTTGGGGTCTCCCTTAGAGAAACACTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTATTGGCTTAAAATTTTGGGGTCTCCCTTAGAGAAACACTAATT  450

seq1  TTCTCACTCTTTGTAGTATTTATGTGCATATAGTTCTTCATCTACAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTCTTTGTAGTATTTATGTGCATATAGTTCTTCATCTACAATTT  500

seq1  TTCTTCACAAGATTTACTTATTCCCAGTTAGTGTTACTAACCTGGATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACAAGATTTACTTATTCCCAGTTAGTGTTACTAACCTGGATGAT  550

seq1  GTTTTTTTTTCAGAAATTGTTTTGATAAGCAAATTATATTGTTGGACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTCAGAAATTGTTTTGATAAGCAAATTATATTGTTGGACTAT  600

seq1  CAAAAGTGAAAACACCCCCATATTTCTAGGATGCCCAATCTCAAAGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTGAAAACACCCCCATATTTCTAGGATGCCCAATCTCAAAGCAGA  650

seq1  TTTCCTGAATTTCTGATGTACAATCTTCCACACTCTTCTAACCAATG  697
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAATTTCTGATGTACAATCTTCCACACTCTTCTAACCAATG  697